Oncorhynchus keta (chum salmon): 118387576
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Entry
118387576 CDS
T09424
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04020
Calcium signaling pathway
oke04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
118387576
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118387576
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oke04040
]
118387576
Ion channels [BR:
oke04040
]
Ligand-gated channels
Glutamate (ionotropic)
118387576
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
118387576
NCBI-ProteinID:
XP_052381659
EnsemblRapid:
ENSOKEG00005025064
LinkDB
All DBs
Position
9:complement(32538329..32574317)
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AA seq
968 aa
AA seq
DB search
MRLFLLAVFLSCSCARGGCEPKIVNIGAVLSQKRYEQVFKDAVTQANQIYGRDKFKLTAI
SVTHKPNAIQMALSVCEDLISNQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVVGLTT
RMSIYSDKSIHLSFLRTVPPYSHQAHVWFDMMREFRWNHIILIVSDDHEGRAAQKRLETL
LEERETKNKKRNYENLDQLSYDNKRGPKAEKVLQFSQETNLTALLLEAKELEARVIILSA
SEEDAAAVYKAARFLNMTGSGYVWLVGEREMSGKALSEAPDGLIGLQLINGKNESAHIND
AVAVVAQSIQELFEKENITEPPRGCVGNTNIWKTGPLFKRVLMSSKYPEGLTGRVEFNDD
GDRKYAHYSILNYQKSRLIQVGIYNGTQVVMNNQRKIIWPGGETEKPRGFQMSTRLKIVT
IHQEPFVYVKPTEQDGTCKEEKTLNGVADIKKVICTGPNETIPGRPIVPQCCYGFCIDLL
IKLAGTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTINNER
AQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRF
SPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMII
VASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMY
RHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMR
KDSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGG
IAAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDSKEASGSQAVGASMTPSLP
SSSLETQDDRKSGRAEPPDPKKKASFRSISTSLASSIKRRRSSKDTQYPPTDITGQLNLS
DPSVSTVV
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgtttctgctggcggtgttcctctcgtgctcttgcgcgcggggcggctgcgaa
ccgaagatagtgaacatcggagcagtcctgagtcagaagaggtacgagcaagtctttaag
gatgcggtgacccaggcgaatcagatctacgggagagataaattcaagttgaccgccatc
tccgtaacgcacaaacccaacgctatccagatggctctctccgtctgcgaggacctcatc
tctaaccaggtgtatgccatcctggtgagtcatcctccccagtccaatgaccacctcacc
cccacgcctgtgtcatacaccgcaggcttctaccgcatccctgtggtgggcctcaccacg
cgcatgtccatctactccgacaagagtatccacttgtcctttctgcggactgtccccccg
tactcccaccaggctcacgtgtggtttgacatgatgcgagagtttcgatggaaccacatc
atcctgattgtcagcgatgaccacgaggggcgggccgcgcagaagagactggagacccta
ctggaggagagggaaacaaagaataaaaaaaggaactatgaaaacctcgaccaactgtcc
tatgacaacaagcgaggacctaaggcagagaaagtcctccagttcagccaggagactaac
ttaactgctctgcttctggaggccaaagagctggaggctcgtgtcatcatcctctccgcc
agtgaagaggacgctgctgcagtttacaaggctgcccgtttcctgaacatgacaggctcg
ggttacgtgtggctggtgggagagcgggagatgtcgggtaaagccctgagtgaggcacca
gatggtctcatcggcctccagctcatcaacggcaagaacgagtcggcccacatcaacgac
gcagtggcagtggtggctcagtccatccaggagctctttgagaaggagaacatcacggag
ccgcccagaggctgtgtgggaaacaccaacatctggaagactggccccctcttcaaaagg
gttctgatgtcatcaaagtacccagagggcctcactggacgtgtggagttcaatgacgat
ggcgacaggaagtatgctcactacagcattctcaactaccagaagagtcgactcattcaa
gtcgggatttacaatggaacacaggtggtgatgaataatcagaggaagatcatctggccg
ggaggagagacagagaaaccgcggggctttcagatgtccacaagactaaagatagtgacc
atacaccaggagccctttgtgtatgtgaaacccactgagcaggatggaacctgcaaggag
gaaaaaaccttaaatggagtggcagatattaaaaaggtgatctgcactggaccaaatgag
accatcccaggacgtccaattgtacctcaatgttgttatggattctgtatcgatctactt
atcaagttggccggaaccatgaactttacctatgaggtgcacctggtggctgatgggaaa
tttggaacacaggagcgggtgaacaacagcaacaagaaagagtggaatggcatgatggga
gagctcctggggggtctggcagatatgattgttgccccgctgacgataaacaacgaacga
gcccagtacatcgaattctccaaaccttttaagtaccaaggcctaaccatcctcgttaaa
aaggaaatccctcgcagtacactggactcgttcatgcagccttttcagagcacactgtgg
ctgctggtgggtctttcggtgcatgtggtggcggtgatgctttacctactagaccggttc
agcccgtttgggaggtttaaagtaaacagtgaagaagaagaagaagacgccctcaccttg
tcgtcagccatgtggttctcctggggagtgttgcttaactccggtattggggaaggcgcg
ccgcgcagcttctcagcgagaatcttgggcatggtgtgggccggctttgccatgatcata
gtggcatcgtatactgccaacctggctgccttcctggtgctggaccggcctgaggagcgc
atcaccggcatcaacgacccgaggttgaggaacccatcagacaagttcatctacgccact
gtgaagcagagctctgtggacatctacttccggcggcaggtggagcttagcaccatgtac
cgccacatggagaagcacaactacgagagtgccgctgaggctatccaggccgtgcgcgac
aacaagctgcatgctttcatctgggactctgcggtgctggagtttgaagcctcgcagaag
tgcgacctggtgaccacgggagagctgtttttccgttcgggctttggcataggcatgcgc
aaggacagcccctggaaacagaatgtgtccctggccattctcagttcccatgagaatgga
ttcatggaagatctagataaaacctgggtgagataccaggagtgtgactcacggagcaat
gccccagccacactcacctttgagaacatggcaggagtgttcatgttggtggctggaggc
atagcagcagggatcttcctcatctttattgagatcgcctacaagcgacacaaagacgcc
cgaaggaagcagatgcagctggcctttgcggccgtcaacgtctggaggaagaacctgcag
gacagtaaggaggcctctgggagccaagctgtgggcgcatcgatgactccatcgttaccc
tcttcctctctagagactcaggatgataggaaaagtggtagagcagagccccccgacccc
aaaaagaaagcctcttttaggtccatcagtacctccctggcctccagcatcaagagacgt
aggtcgtccaaagacacgcagtacccacccaccgacatcacgggccagctcaacttgtcc
gacccatctgtcagcacagtggtgtga
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