Oncorhynchus keta (chum salmon): 118395168
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Entry
118395168 CDS
T09424
Name
(RefSeq) vascular cell adhesion protein 1
KO
K06527
vascular cell adhesion molecule 1
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
118395168
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
oke04090
]
118395168
04091 Lectins [BR:
oke04091
]
118395168
CD molecules [BR:
oke04090
]
Proteins
118395168
Lectins [BR:
oke04091
]
I-type lectins (Siglecs)
118395168
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
C2-set_2
C1-set
C2-set
ICAM1_3_5_D2
HET-s_218-289
Ig_C17orf99
Adhes-Ig_like
Ig_4
Motif
Other DBs
NCBI-GeneID:
118395168
NCBI-ProteinID:
XP_052319327
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All DBs
Position
15:11144753..11154557
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AA seq
660 aa
AA seq
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MYKYQHGPRTEGCLSSFLQEKNSFSCNFSKQIMAAFALWIVLLPTAASKFVLNLTPKHPM
ARVGDSLVLTCKASGCAEAVTFTWSSLIDRSLYGKTETNGTVSLQIFNPLEIHHVNTVVC
KATCRTKGEVPQNAQTSTKVNVYALPKDPTISRSDLLTEGQESNLTCTVPDVYPAERLII
EWLLGDEVLLKQDEHLEVQTVTSVLKYRPTAQNNGQNVTCRATLDIGIDKITRETVASMT
IQYSPRKITISENTQVKIGDGFTLTCRAEGNPEPTVLWRKLDQDGRSVVAGEGATLLVEE
ASWSHGGEYECVAHNVVGNLTAHMTVNVQGPPEKPVLYLSPSGELKAGDSVTITCQSESG
PQGRVALRQLTGSQGAELQSNQGHTSITVQSLTARDSGLYECQATNPYGKQTSSINITVF
NELYTETQRTTATVASMTVQYSPRKITISENTQVKIGDGFTLTCRAEGNPEPTVLWRKLD
QDGRSVVAGEGATLLVEEASWSHGGEYECVAHNVVGNLTAHMTVNVQAPPTNLSMEVFPS
AEFEKGQNVTIWSWAVGVPAPSATLVRLRDGVELHSSDGTFHLVHLGPEHAGLYLLNVTN
VVGHQSLSFSLSVSIQDKSVNPQTVIIPVCFVFMTAAAATLMRFLKRAKQASSYELARTV
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgtataaatatcaacatgggccaaggacagaaggttgtctctcaagctttcttcaagag
aagaactcatttagctgtaatttctcaaaacagatcatggctgcgttcgctctttggata
gtattgctgcctactgcagcgtcgaaatttgtcctaaacctcacaccgaagcatcccatg
gctcgagtcggcgacagtctggtcctgacgtgcaaagccagtggttgcgccgaagccgtc
acgttcacctggtcttcattgattgaccggtcactctacggtaaaacggagaccaacggg
acagtgtccctgcaaatatttaacccgttggaaattcatcacgtcaacacggtcgtctgt
aaggccacatgcagaaccaaaggagaagttccacaaaacgcgcaaacgtctactaaggtg
aacgtctacgccttaccaaaggatcccaccatatcaagaagtgaccttttgactgagggt
caggagagtaacctcacctgtacagttccagatgtgtacccagctgaacgtctaatcatt
gagtggctactgggagatgaagttctcctcaaacaagatgaacatctggaagtccagact
gtcacctcagtgttgaaatacagaccgacagcccagaacaatggacagaatgttacctgc
agagccacgctggacattgggattgacaagataaccagagagactgtcgcatcaatgacc
atccaatattcccccagaaagatcactatctcagagaacactcaggtgaaaatcggagac
ggttttacactgacgtgtcgtgctgaggggaaccctgaacctacagtgttgtggagaaaa
ctggaccaagatggccgctcagtcgtggcaggagagggtgcgaccctattggtggaagaa
gcgtcatggtcccacggtggagagtatgaatgcgtggcccacaacgtcgtaggaaacctt
acagctcacatgactgttaatgttcaaggtcctccagagaagcctgttctttatctgagc
ccatctggtgagctgaaagcgggggacagtgtgaccattacctgccaatcagagagtggg
ccgcaggggcgtgtggcgttacgtcagttgaccggcagtcagggggcggagctacagtcc
aaccagggccacacctccatcactgtccaatcgctgacagctagagactcgggactgtac
gaatgtcaggctaccaatccctatgggaaacagacatcttccattaacatcacagtcttc
aatgagctttatacagagacccagagaaccacagcgactgtcgcatcaatgacagttcaa
tattcccccagaaagatcactatctcagagaacactcaggtgaaaatcggagacggtttt
acactgacgtgtcgtgctgaggggaaccctgaacctacagtgttgtggagaaaactggac
caagatggccgctcagtcgtggcaggagagggtgcgaccctattggtggaagaagcgtca
tggtcccacggtggagagtatgaatgcgtggcccacaacgtcgtaggaaaccttacagct
cacatgactgttaatgttcaagcgccgcccacaaacctgtccatggaggtgttcccgtct
gctgagtttgagaaggggcagaacgtgaccatctggagctgggctgtgggcgttcccgcc
ccctccgccaccctggtgaggctgcgggatggggtggagctgcactcctctgacggaacc
ttccacctagtccacctgggcccggagcacgctgggctctacctgctcaatgtcaccaat
gtagtgggacaccagagcctcagcttcagcctcagcgtcagcatccaggataaatccgtc
aatccacagaccgtcatcataccagtgtgcttcgttttcatgaccgctgctgccgcgact
ctgatgcgattcctgaagagagcaaaacaggcaagttcatatgaacttgcaaggacagtt
tag
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