Oncorhynchus keta (chum salmon): 118402346
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Entry
118402346 CDS
T09424
Name
(RefSeq) lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase A-like
KO
K03766
beta-1,3-N-acetylglucosaminyltransferase 5 [EC:
2.4.1.206
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke00601
Glycosphingolipid biosynthesis - lacto and neolacto series
oke01100
Metabolic pathways
Module
oke_M00070
Glycosphingolipid biosynthesis, lacto-series, LacCer => Lc4Cer
oke_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
118402346
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
oke01003
]
118402346
Enzymes [BR:
oke01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.206 lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase
118402346
Glycosyltransferases [BR:
oke01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
118402346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Galactosyl_T
Fringe
Orthopox_A43R
Motif
Other DBs
NCBI-GeneID:
118402346
NCBI-ProteinID:
XP_035656382
EnsemblRapid:
ENSOKEG00005045276
LinkDB
All DBs
Position
23:41553053..41567179
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AA seq
387 aa
AA seq
DB search
MFVNFRRIRKCQCVQLMTTCLVLSVVMVCWEQLDSGMVSHINSYSYRYLVNSYTFINKSF
TIPRQEAHMFSNHRYLLNHPYKCSGEKDILLLLLIKSSPENFERRRAIRSTWGNETYIRQ
DLGVTVKVMFVLGLPKQHETAQTWRGRSRGIQDSLVDEDRRHGDLVQQDFVDTFHNLTLK
LLLQFRWAHFYCPHARFLMTADNDIFVHMPNLVRYLQDTDRKGVTDFWIGHVHRGAPPIR
QKESKYYVPQELYPWASYPDYTAGAGYVVSRDVADKIYQASLTLNASLYIDDVFMGICAN
AMGVSPQEHVYFSGEGKAPYHLCIYDKMMTSHGHLADIYELWEAATNPEVKRVTSGLFGR
LYCTAVKVTLLCRPYFFNTYPCKAALL
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtgaatttccggcggatccgcaagtgccagtgcgtgcagttgatgaccacatgc
ctggtgctgtcggtggtgatggtatgctgggagcaactggacagtggcatggtgagccac
atcaactcctactcttaccgctacctggtcaacagctacactttcatcaacaagagcttc
accatcccacgacaggaggcccacatgttcagtaaccaccgctacctactcaaccacccg
tacaagtgttcaggagagaaggacattttactgcttctgctcatcaagtcctccccggag
aactttgagagacggcgagccatacggtcgacgtggggcaacgagacctacattcgccaa
gacctgggggtgacggtgaaggtgatgtttgtgctgggccttcccaagcagcatgagacg
gcccagacgtggagggggaggagcagaggcatccaggacagccttgtcgatgaggaccgc
aggcatggcgacttggtccagcaggactttgtggacacgttccacaacctcaccctcaag
cttctgctacagttccgctgggctcatttctactgcccgcatgcccgattcctcatgacg
gctgacaatgatatcttcgtgcacatgcccaacttggtgcgctacctgcaagacacggac
aggaagggcgtgacggacttctggatcggtcacgtgcacagaggcgcgccaccgatccgc
cagaaggaaagcaagtactacgtcccgcaagagctgtacccttgggcgtcatacccggac
tacacggcaggggccggttacgtcgtctcgagagacgtggcggacaaaatctaccaggcc
tcattgacgctcaatgcctcgctgtacattgacgatgtcttcatgggcatctgtgccaat
gccatgggcgtgtcgccacaggaacacgtgtacttctcaggcgaaggcaaggcgccctac
cacttgtgcatctacgacaagatgatgacatcgcacggacatttggccgacatttatgag
ctctgggaagccgccacaaacccggaggtcaaaagggtcacatcgggactttttgggagg
ttgtactgcacggcagtgaaagtcacccttctgtgcagaccctacttcttcaacacctac
ccctgcaaggcagccttgttgtag
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