Oncorhynchus keta (chum salmon): 118402879
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Entry
118402879 CDS
T09424
Name
(RefSeq) histone-lysine N-methyltransferase PRDM9-like isoform X1
KO
K20796
[histone H3]-lysine4 N-trimethyltransferase PRDM7/9 [EC:
2.1.1.354
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke00310
Lysine degradation
oke01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
118402879
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118402879
03036 Chromosome and associated proteins [BR:
oke03036
]
118402879
Enzymes [BR:
oke01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
118402879
Transcription factors [BR:
oke03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
118402879
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
118402879
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
118402879
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
PRDM2_PR
zf-H2C2_2
SET
zf-C2H2_6
zf-H2C2_5
zf-C2H2_2
zf_C2H2_ZHX
zf-C2H2_jaz
zf-met
Motif
Other DBs
NCBI-GeneID:
118402879
NCBI-ProteinID:
XP_035657125
EnsemblRapid:
ENSOKEG00005011068
LinkDB
All DBs
Position
24:complement(25613150..25617840)
Genome browser
AA seq
969 aa
AA seq
DB search
MITKIISNYRFQEAQVVQSTVMSEEVIVVEWADPGVSEEGCQVQIITDNPSAVFSDSLVQ
NILVNTVVQGQEEGHQLLDDNGNDLYCEECHTSNKDQCDVQGGLSFMLDSPTPMGIPQRA
LLTLPHGLVVGRSSIPGAGLGVLNQGPAVAPGMHFGPCEGEVTTRERAVASDYSWEVWNS
KSESEYIDAARDTHSNWMRYVNCARNEEEGNLIALQYRGIVFFHCCRSILPGDEFLFWPG
GRFIERFRDPSDQIWLRKCTPSEFRTDLSSQVFLCCQCQLTFTTKSYLQKHTEKSHSLDL
SPASELSELDNHLSNGNVKPDPMSSSSVGELAYRCPQCPKSFKQKGHVQRHMRNVHSKVK
PYCCIHCRRCFAQLSCLARHQIRVHGKKKKQGIEEFMSEEVRGKSQPPPDRTQEIESSTS
DAPPTGTSVLFPCPHCPFSSTVESSLCEHMKSHDQREKVIKMQAFLEVRGESTHKPESPE
LPSDGLHTEPQTDEPAQRGEEANSCSQCGKRFKQKGHFQRHMRAVHSNVRPYCCPQCRKC
FAQGYDLARHQLRVHGTKKKHRVVEVRGENLPRPPSDSAWEPEPPSNDSPTETQTGRAPS
QRLRNLRVKSTRTSKAKTKTNAPKQRQISTKKRSHSDPDSDDLDMEKEMEGEAVGEEAQY
SCTECQGTYDNPESLRSHQCIQVVVGPPPYSCSTCGVTFKRYTTLKKHKLNKHPKENMRY
CCTRCGRFFSQAAGLQRHLEAEVCKDIQLSSEAVPCSYCQFSFTEERYLRKHVKRHHPEE
YVSQASGLGLIPPEQKAVEGGEVHLCFQCGKSYKYVKCFKSHRCFQSVTAKRYLCNDCGK
GFSCFYSLKQHQRIHTGEKPYRCSYCEKCFSHSGQLNVHVRIHTGEKPFLCTECGETFRQ
SGDLKRHERKHTGVKPCTCPECGKSFSRPQSLKAHQLLHNGEKLYKCDQCVKRFSRNYHL
TRHHEKMHS
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgataacgaagattattagtaattacaggtttcaagaagcgcaggttgtccagtctaca
gtgatgtctgaagaagtgatcgttgtggagtgggcagatcctggtgtgtcagaggaggga
tgccaagtccaaatcattacagacaacccctctgcagtgttctctgacagcctggtccag
aatatattggtgaacactgtggtacaaggccaagaggagggtcatcaactactagatgac
aacggtaatgacctctattgtgaggagtgtcatacctccaacaaagaccagtgtgatgtc
caaggtggtctgtccttcatgctggactctcccactccaatgggtataccccagagggcc
ctcctcaccctaccccatgggctggtggtaggcaggtccagtatcccaggggcaggcctg
ggggtcctaaaccaagggccagctgtggccccaggaatgcactttggcccctgtgagggg
gaggtgactaccagggaaagagcagtagcaagtgactattcctgggaggtctggaacagt
aagagtgaatctgagtacatcgatgctgcacgagacactcattccaactggatgaggtat
gttaattgtgctcgtaatgaagaggagggtaatctcatagcactccagtacagggggatt
gttttcttccactgctgccgctccatcctcccaggagatgagttcctgttttggcctggg
ggcagattcatcgaaaggtttagggacccctctgaccaaatctggctccgaaagtgcacc
ccttcagagtttagaacagatttgtcgtctcaggttttcctctgctgtcagtgccagctt
actttcaccaccaagtcctaccttcaaaaacatacagagaaatcacactctctggaccta
tcacctgcgtctgaactgagtgagcttgacaatcacctttctaatggcaatgtaaagcca
gacccgatgtcgtcttcctctgtaggagagttggcctaccggtgccctcagtgtcctaag
agctttaagcagaagggccacgtccagagacacatgcgaaatgtccactccaaggtgaaa
ccgtactgctgcatccattgtaggaggtgtttcgctcagctgtcttgtctggccaggcac
cagatacgagttcatggaaagaagaagaagcagggaatagaagagtttatgtctgaagag
gtcagagggaagagtcagccaccccctgacaggacccaggaaatagagtcctccacctcc
gatgctccacctacagggacctcggtcttattcccgtgtcctcattgcccattctcttct
actgtggagagcagcctttgtgagcacatgaagagccatgaccaaagggaaaaggtcatc
aaaatgcaggcttttctagaggtcagaggggagagcacccataaacctgaatcccctgaa
ctcccctctgatggtctacatacagagccccagacagatgagccggcacaaagaggtgag
gaggccaacagctgctctcagtgtgggaagcgctttaaacagaagggtcacttccaaaga
cacatgcgagctgtccactccaacgtcagaccctactgctgcccccagtgcaggaagtgt
tttgctcaggggtatgacctggcgaggcaccagctacgagttcacggaacgaagaagaag
catcgagtagtagaggtcagaggggagaatctgccccggccgccctctgacagcgcctgg
gaaccggagcccccctccaatgattcacctacagagacccagactggaagagctccctct
cagagactaagaaacctcagagtaaagtccaccaggacctctaaagccaaaactaagaca
aacgcaccaaaacaaagacaaatcagtaccaagaagagatcccattcagatcctgattca
gatgatctggacatggagaaggagatggagggagaggctgttggagaggaggcccagtac
agctgcactgagtgtcagggaacctacgacaacccagagtctctcagatcccatcagtgc
atccaagtcgtggtggggccgccgccgtattcttgctctacatgtggggttaccttcaaa
cggtacaccaccctgaagaagcacaagctcaacaagcacccgaaggaaaatatgcgttat
tgctgcacccgctgtggaaggttcttcagtcaggctgccggtctacagcgccacctggag
gcagaagtatgtaaggacatccagctgagctctgaagctgtcccctgctcctactgccaa
ttctccttcaccgaggagaggtacctccggaagcacgttaagagacaccaccctgaggag
tatgtctctcaagcctcaggcctgggcctcattccaccagagcagaaggccgtggagggg
ggagaggtccacctctgctttcagtgtgggaagagctacaagtatgttaaatgcttcaaa
tctcacaggtgtttccagtcagtcacagccaaacggtacttgtgcaatgactgtgggaaa
ggtttctcttgtttctacagccttaagcagcatcagcggattcacacgggagaaaagcca
taccgctgttcttattgcgagaagtgttttagccactctggacagctgaatgtgcacgtg
aggatacacacaggggagaagcctttcctgtgtacagagtgtggagagaccttccgtcag
tctggggatctgaagcgccatgagagaaaacacactggggtgaaaccatgtacctgtcct
gaatgtgggaaaagcttcagtcgacctcagagtctgaaagctcaccagctgctgcacaac
ggagagaaactgtacaagtgtgatcagtgtgtcaaaaggttttcacgaaattatcacctg
acgagacaccatgaaaagatgcactcataa
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integrated database retrieval system
