Oncorhynchus keta (chum salmon): 127913774
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Entry
127913774 CDS
T09424
Name
(RefSeq) LOW QUALITY PROTEIN: glutamate receptor ionotropic, NMDA 3B-like
KO
K05214
glutamate receptor ionotropic, NMDA 3B
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04020
Calcium signaling pathway
oke04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
127913774
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
127913774
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oke04040
]
127913774
Ion channels [BR:
oke04040
]
Ligand-gated channels
Glutamate (ionotropic)
127913774
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan-Glu_bd
Lig_chan
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
127913774
NCBI-ProteinID:
XP_052342991
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All DBs
Position
30:60996500..61056001
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AA seq
1372 aa
AA seq
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MEYLYLLGRWMCNYFIPIRIRPSPFFTGRFIPLLVFLHGFVFHPDPCLSHPQPCHILARI
GHTVRLGALLPTRQPARVHNALNRALTSLKHRAGEGNPPLLPYNLTLEVVSRSPSGGDPV
SLSRCVCQELVVRGVTGVLAFPRSPEELIHIDFLSSFLEIPFISLLEDLEPLRVKNRFHL
QMSVRVPPSCLANLLLSVLQGVEGETERGEGLLKHLETQKGTKWNLLDIINLTHIGGEER
REERGKEERREERGKEERREERGEEGRGAERSEETGHETREDKREAEILSLLSRRLLRSA
SPLSSVVILGSDPECLSSVLRCAQRLAPSLPALQWIMGNPLSPDSLLSLGGPLGLLAYGE
VGRKPITFYIRDALRLIGQAVTSASEVRPDLALIQNLVNCYDKPNKEEVPSSGQYLARFL
SNTSFQGSTGTVRVAHLSQVLSSQLYHVWSLKRGPLGQPSWVTVAHWTTGRLQLGRGWRP
GMAGRRLRVVTLVEHPFVFTREVDEDGLCPAGQLCLDPRTNHSDLLDSLFGHLHQTNTTT
TTTDHKDLRKCCYGYVIDLLEKLSEDLKFTFDLYIVGDGKYGAMSSTGRWTGLVGDLLSG
TADMAVTSFSINSARSRVIDFTSPFYSTSLGILVRSQDTSAPIGAFMWPLHWSMWVGIFV
TLHLTALFLTVYEWNSPFGMTPHGRNRLRVFSXALNLCYAILFEDCRLRYCGREEALQTP
KCWTSRFLMNLWAIFCLLVLSSYTANLAAVMVGEKTFEQVSGIHDEKLHHPSRGFRFGTV
RESSAEDYMRKSFSAMHDYMRRYNQPTTPDGVDMLKTDPPLLDAFIMDKALLDYEVSIDA
ECKLATVGKPFAIEGYGMGVAQGSPLTANVSEFISRYKSEGYMDILHEKWYKVVPCGKRV
FTNTENLSMGIDHFSGLFVMLCVGVVGAIFTLAAEHTFYHLALPRLRRSHTLTYWLHTSQ
KIHRALNTPYEDVGKELIGLDHNPSPCVSDSCSLHRHQQPRPPPPPPSSPPPPQPSSPAR
DIKENKRVHFDLESLHSYRLHTHTASFWGRPGMVGRHGLGGCLGGLSPPQVSLHANGGPA
SALASPGLVLPPLGNPGNQAFLWEGELQEVQGRIETFTAQLRDAVARRAEIQTCLENHKM
NQSTATAVKLEKDKVGQSQSLERVRTNAEKDRTKEEREGINQEKRKSGRSNLCSSLDRDR
DRDRDRTSRDSSTVRQTARQDTDRDRLLHQSETERDRDDQSKSLGGNGSSQSHASNILQT
GRNSQSEVLIILQRRREIQSKTSASLDRGTTNQSGAVNTLQGERTVQSRNSTSLERGRAR
QSGAVNDQERGRTVQTRTGAGLDRLRASQSSACTGNLVRECPAPVDTQKSLC
NT seq
4119 nt
NT seq
+upstream
nt +downstream
nt
atggagtatttgtatctacttggtcgatggatgtgcaactactttatacccataagaatt
cgcccatctccttttttcactgggagatttatcccgctgttggtcttcctccatggcttc
gttttccatcccgatccgtgcctctcccacccccagccatgtcacatcctggctcggata
ggacacacggttcgtctcggtgctctgcttcccaccagacaaccagccagggtacataac
gctctgaacagagccttgaccagcctgaagcaccgggctggagaaggcaacccgcctctt
ctgccctacaacctcaccctggaggtggtgtctcggtccccgtctggtggcgaccctgtc
tccctgtccaggtgtgtgtgtcaggagctggttgtgcgaggggtgacaggtgtcctggcc
ttccctcgttcaccagaggagctcatccacatcgacttcctgtcctccttcctggaaata
ccttttatatcactactggaggacctagaaccactcagagttaagaaccggttccatctc
caaatgtcagttcgtgttccaccttcttgcctggccaaccttctgctctctgttctccag
ggggtagagggggagacagagaggggggagggactactgaaacatctagagacacagaaa
ggaacaaaatggaatctactggatatcatcaaccttacacatataggaggggaggagagg
agggaggagagaggaaaggaggagaggagggaggagagagggaaggaggagaggagggag
gagagaggggaggagggaagaggggctgagagaagtgaagaaacaggtcatgagaccaga
gaagacaagagggaagctgagatcttgtctctcctctcccgtcgtcttcttcgctccgcc
tctcctctctcctccgtggtcatccttggttccgacccagaatgtctctcttctgtcctc
cgctgcgcccagcgtctcgctccctcgctccccgcgctgcagtggattatgggtaaccct
ctgtcacctgactctctcctctcgctgggcgggcccctcggcctattggcttatggagag
gtgggtcgtaaacccatcaccttctacatccgagacgcactgcggttgattggccaggcg
gtgacgtcggccagtgaggtgaggccagacctggctctgatccagaacctggtcaactgt
tacgacaaacctaacaaagaggaagtgccctcttctggacagtacctggccaggttcctc
tccaacacgtcgttccagggttctacgggcacggtccgtgtggcacatctctcccaggtc
ctctcctcccagctgtaccacgtgtggagcctgaagagaggtcctcttggccagccgtcc
tgggtcaccgtggcccactggaccaccgggcgcctacagctggggaggggatggaggccg
gggatggcgggccggagattaagggtcgtgaccctggtggagcatcccttcgtgttcact
agagaggtggatgaggatgggctgtgtcccgctggtcagctgtgtctggacccgaggact
aaccactcagatctactggactcactgttcggtcacctgcaccagaccaatacaactact
accactactgaccacaaggacctgcggaagtgttgctatggttacgttattgacctgttg
gagaagctgtcggaggacctgaagttcacctttgacctttacatcgtgggagacgggaag
tacggagcgatgagcagcactgggaggtggaccggtctggtgggagacctgctgagtgga
acagcagacatggctgtgacatcattctccatcaactcagccaggagcagagttatagac
ttcacctctccattctactctacctctctggggatactggtgcgtagccaagacacatca
gctcctattggggccttcatgtggcctctccattggtccatgtgggtgggcatcttcgtc
actcttcatcttaccgcacttttcctcaccgtctatgagtggaacagcccctttggtatg
actcctcatgggaggaacagactcagagtgttctcctaagccctcaacctctgctacgcc
atcctgtttgaggactgtcgactaaggtactgtgggagggaggaggctctccagactcct
aagtgttggaccagtaggttcctgatgaacctgtgggccatcttctgcctgctggtgttg
tccagttatacagctaacctggctgctgtcatggtgggggagaaaacctttgaacaggtg
tctggaatacatgacgagaagctgcaccacccatcccgtgggttcaggtttgggacagtc
agagagagctctgcagaggactacatgaggaagagtttctctgctatgcatgactacatg
agacgttacaaccaacccaccacaccagacggagtggacatgttaaagacagatcctccc
ctactagatgccttcatcatggataaagctctattggactatgaagtctccatcgatgct
gagtgtaaactagcgactgtgggcaagccttttgctatagagggttatggtatgggtgtt
gcccaaggctctcctctcactgccaacgtgtctgaattcatcagtcgctacaagtcagaa
gggtacatggacatattacatgagaaatggtacaaggtggtgccatgtgggaagcgagtg
ttcactaacactgagaatttatcgatggggatagatcatttctcaggcctgtttgtgatg
ttgtgtgtgggggtggttggagccatctttaccttggcagctgaacacaccttctatcac
ctagccctgccccggctacgacggtcacacacacttacctactggttgcataccagccag
aagatccatcgagccctgaacaccccttacgaggacgtagggaaagagttgattggcctg
gaccacaatccctccccttgtgtctctgacagctgcagcctccacagacaccagcagcct
cgccctcctcctcctcccccgtcttccccccctcctcctcagccctcctctcctgcccgg
gacatcaaggagaacaagagggtccactttgatctggagagtctacacagctaccgtcta
cacacacacaccgcctcgttctggggacgtcctggcatggtggggcgacacggcctggga
gggtgtctgggtggtttatctcctcctcaggttagcctgcatgctaacggtggcccagca
tcggccctggcctcccccggcctggtcctgcctcctctggggaacccaggcaaccaggcc
ttcctgtgggagggagagctccaggaggtccaggggaggatcgagacgttcacagcccag
ctgagagatgccgtggccaggagggccgagatacagacctgcctggagaaccataaaatg
aaccagagcacagctactgctgtcaaactggagaaagacaaggttggccagtcacaaagc
ctggagagagtgagaaccaacgcagagaaagatagaaccaaggaagagagagaggggatc
aaccaggagaaaaggaagagtggcagatcaaacctctgtagcagcctggacagagacaga
gacagagacagagacaggacaagcagggacagttccactgtgagacaaacagccagacag
gacacagacagggacagactgttacaccaatcagaaactgagagagacagagacgaccaa
tcaaaaagcctgggcggaaatgggagcagccaatcacatgcctccaacattctgcagaca
gggaggaacagccaatcagaagttctgatcatcctacagaggaggagagagatccaatca
aaaacctctgccagcctggacagagggacaaccaaccaatcaggtgctgtcaatacactg
cagggagaaagaactgtccaatcacgtaactccaccagtctggagagaggaagagccagg
caatcaggtgcagtgaatgaccaggagagggggagaactgtccaaacacggacaggggct
ggtctggacagactgagagctagccaatccagtgcctgcactgggaatctggttagagaa
tgtcccgcccccgtggacacacagaagagtttgtgttag
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