Oncorhynchus keta (chum salmon): 127925625
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Entry
127925625 CDS
T09424
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent T-type calcium channel subunit alpha-1I-like
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04010
MAPK signaling pathway
oke04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127925625
04020 Calcium signaling pathway
127925625
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oke04040
]
127925625
Ion channels [BR:
oke04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
127925625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
FAM176
PKD_channel
Cornifin
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
127925625
NCBI-ProteinID:
XP_052366607
LinkDB
All DBs
Position
Unknown
AA seq
1172 aa
AA seq
DB search
VITLEGWVDIMYYVMDAHSFYNFIYFIFLIIVGSFFMINLCLVVIATQFAETKQRENALM
REQRARYMSNDSTLASYSEPGSCYEEMLRYVSHLYRKLTRRVQRMYTTWHSKRRKKVNPN
GGGSGPGVGRRTSGHAPWLRPVHNLLQHHQRHHCRHSNGGHPPVATGGEELEMRSLPVLG
RDPSVTPGLGSSLLGRLNGGMNYPTILPSFVCSYRSFTPKPLPTQHHIPTHPHNPLPTNL
HSPLPTYLHGPQPTQPHIPLPTQPQRPLPTQPSPLSENSPDPLSKLHQLMGQHKAHTLHD
FPQGGEGRGGRGRRRRKAGLGARLGLGVKGASNRLLDLGTAFRDRLKRIVDSKYFNRGIM
TSILINTLSMGIEYHQQPVELTDVLEISNIVFTCMFLLEMLFKLLAFGLFGYIKNPYNIF
DSIIVIISVWEIVGQADGGLSVLRTFRLLRVLKLVRFLPALRRQLVVLMKTMDNVATFCT
LLMLFIFTFSILGMHLFGCKFNQQMENGDTIPDRKNFDSLLWAIVTVFQILTQEDWNVVL
YNGMASTSPLAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDANRADSDDDKRSDDDGE
EEKKEKVEELKDTELQMYSLMMTANGHADRNTLAPPITITRTAATPVPTPKSSLGPESVL
GEGLVYGDVCSDFGDSRRGSAAASIDPYDQRSLSSPGQHSPLPPRGQGSVSGWGSRRSSW
NSLNRAPSLKRSKTSGERESLLSGEGGGEEEEGALELLQVSSLGPSVTGEYGDCNGRSLH
HMTYDPNKDLSPDDDMEEDNLWFRVRRTLQSHKPRWCREHEDWNLYLFSPQNSFRVWAKG
MISHKMFDHVVLLFIFLNCITIXLERPGILPHSTERVFLSIVALGFCWGKQSYLKSSWNV
LDGILVFVSLVDILVSLALTGGNRILGILRVLRLLRTLRPLRVISRAPGLKLVVETLITS
LRPIGNIVLICCAFFTVFGILGVQLFKGKFYLCEGPDTRNISTKTDCLLANYRWTRRKYN
FDNLGQALMSLFVLSCKDGWVNIMYDGLDAVGVDQQPVRNHNPWMLLYFISFLLIVSFFV
LNMFVGVVVENFHKCRQDQEEEEQRLREEKRLKILEKKRRSKEKDGAEAQQRPYYADYSR
WSPSTPHHSHYLTSSSPSSSVNYSNHITTNHR
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
gtgataaccctggaaggctgggtggacatcatgtactacgttatggatgctcactccttc
tacaattttatatattttatattcctcatcatagtgggctctttcttcatgatcaacctg
tgcctggtagtcatagcgacccagtttgcggagacgaagcagcgtgagaacgcgttgatg
cgcgagcagcgagcgcgttacatgtccaacgacagtactctggccagctacagcgaaccg
ggatcctgctacgaagagatgctgagatacgtttcacacctctaccgtaaactgacccga
cgagtacaacgcatgtacactacctggcacagtaagcgtcgtaagaaggtaaaccctaac
ggaggaggaagtggtccgggggtcggccgcagaacgtccggacacgccccctggctccgc
cccgtacacaacctgctgcaacatcaccagcgccaccactgtcggcacagcaacggagga
cacccccccgtagcaacaggtggggaggagctggagatgaggtcacttcctgtcctgggt
cgtgacccctctgtgacccctgggctggggtcgtctcttctgggtcgtctgaacggaggg
atgaactaccccaccatcctgccctccttcgtctgcagctaccgcagcttcacccccaag
cccctccccacacagcatcacatccccacacacccccacaaccccctccccacgaacctc
cacagccccctccccacatacctccacggcccccaacccacacaaccccacatacccctc
cccacacagccccagaggccactccccacacagccctcgcccctctcagaaaacagtccg
gaccccctcagcaagctgcatcaactcatgggacagcacaaggcccacaccctgcacgac
ttcccccagggaggagaggggcgcggcggccgtgggaggcgccggcggaaggcagggctg
ggggcaaggctggggctcggggtgaagggggccagtaacaggctgctggatctggggaca
gcattcagagacagactgaaacgcatcgtagacagcaagtacttcaacagagggatcatg
acctccatcctcatcaacactctcagtatggggatagaataccatcaacagccggtggag
ttgactgatgtcctggagatcagtaacatcgtgttcacctgcatgttcctcctggagatg
ctgttcaagctgctggccttcggtctcttcggctatatcaagaacccctacaacatcttc
gacagtatcatcgtcatcatcagtgtctgggagatcgttgggcaggcggacggcggtctg
tcagtcctgcgtaccttccgtctgctgcgggtcctgaagctggtccggttcctgcccgcc
ctgcgcagacagctggtggttctgatgaagactatggacaacgtagccaccttctgtaca
ctgctcatgctcttcatcttcaccttcagtatcctaggcatgcacctgtttgggtgtaaa
tttaatcagcagatggagaacggagacaccatcccagaccgcaagaactttgactcgcta
ctctgggccatcgttactgtgttccagatcctgactcaggaggactggaatgtggtcctg
tataacggtatggcctccacctctcctctcgctgctctctactttgtggctctgatgacg
tttgggaactacgtcctcttcaacctgctggtggccatcttggtggagggcttccaggct
gagggtgatgccaaccgggcggactctgacgatgacaagaggtctgatgacgatggggag
gaggagaagaaggagaaggttgaagagctgaaagacacagagctgcagatgtattctctg
atgatgacggccaacggtcacgctgaccgcaacactctggcccctccaataaccatcacg
cgcacggcggcgacacccgtgccgacgcccaagagctcattgggccccgagtccgttctg
ggggaggggctggtatatggagatgtgtgttcagacttcggggattctcgtcggggcagc
gctgctgcttccatagacccctacgaccagcgctctctgtccagccccggccagcactcg
cccctccctcccagaggtcagggttcggtcagtgggtggggcagcaggaggtcaagttgg
aacagcctcaaccgcgcccccagcctcaaacgcagcaaaaccagcggagagagggagagt
ctgctctcaggggagggaggaggggaggaggaagagggggccttagagctgctgcaggtg
tcctctctgggcccgtctgtaacaggggagtacggggactgtaacgggaggagtcttcat
cacatgacctatgaccccaacaaggacctttcacctgacgatgacatggaggaggacaac
ctgtggttccgggtcaggagaacgctgcagagccacaagccacgctggtgtagagaacat
gaagactggaacctctacctgttctcccctcagaactcgttccgtgtgtgggctaagggg
atgatctctcataagatgtttgatcacgtggtcctcctcttcatcttcctcaactgcatc
accatcnctctggagagacccggcattctgcctcacagcaccgagagagtgtttctgagt
attgtagcgttggggttctgctggggtaaacagagctacctgaagagcagctggaatgtt
ctggatgggatcctggtgtttgtctctctggtggacatcctggtttctctggccttgact
ggagggaaccgcatcctgggaatcctcagagtactacgactgctacgcacactacgacct
ctcagggtgatcagtcgagccccagggctgaagctggtcgtggagactctgatcacgtct
ctgagacccatcgggaacatcgtcctcatctgctgcgctttcttcactgtgtttggaata
ctgggagtacagctgttcaagggtaaattctacctctgtgaaggcccggacaccagaaac
atcagcaccaagacagactgtctgctggccaactaccgctggacacgcaggaaatacaac
tttgacaacctgggacaggctctgatgtctctgttcgtgctgtcctgtaaggatggatgg
gtcaacatcatgtatgatggcctggatgcagtgggagtagaccagcagccggtgaggaac
cacaacccgtggatgctcctctacttcatctccttcctcctcatcgtcagtttcttcgtc
ctcaacatgttcgtgggcgtggtggtggagaacttccacaagtgtcgtcaggaccaggaa
gaggaagagcagcggctacgggaagagaagaggctcaaaatcctggagaaaaagcgcagg
agtaaggagaaggatggtgccgaggcccaacagagaccctactatgcagactactcccgg
tggtcaccatccacaccacatcacagccactacctcacctcttcatcaccgtcatcatcg
gtcaactatagcaaccacattacaaccaaccacaggtaa
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integrated database retrieval system
