Oncorhynchus kisutch (coho salmon): 109864709
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Entry
109864709 CDS
T09179
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit isoform X1
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04010
MAPK signaling pathway
oki04210
Apoptosis
oki04218
Cellular senescence
oki04620
Toll-like receptor signaling pathway
oki04621
NOD-like receptor signaling pathway
oki04622
RIG-I-like receptor signaling pathway
oki04623
Cytosolic DNA-sensing pathway
oki04625
C-type lectin receptor signaling pathway
oki04920
Adipocytokine signaling pathway
oki05132
Salmonella infection
oki05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
109864709
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
109864709
04218 Cellular senescence
109864709
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
109864709
04621 NOD-like receptor signaling pathway
109864709
04622 RIG-I-like receptor signaling pathway
109864709
04623 Cytosolic DNA-sensing pathway
109864709
04625 C-type lectin receptor signaling pathway
109864709
09152 Endocrine system
04920 Adipocytokine signaling pathway
109864709
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109864709
09171 Infectious disease: bacterial
05132 Salmonella infection
109864709
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109864709
Transcription factors [BR:
oki03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
109864709
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
109864709
NCBI-ProteinID:
XP_020308177
Ensembl:
ENSOKIG00005026011
LinkDB
All DBs
Position
LG19:complement(33108129..33143523)
Genome browser
AA seq
930 aa
AA seq
DB search
MAEEEAYLPHPQYYDIEPIWDPLNFTPMSLTNSLRTADGPYLEIIEQPKQRGFRFRYGCE
GPSHGGLPGASSEKNRKSYPQVKICNYQGLARVVVQLVTNSKDAHLHAHSLVGKQCDKGI
CITDQQPKDSSISFPNLGILHVTKKNVIKTLEDRMTEAYRVGYNCGIVIHPEIDAIQGEV
RIPRELTDHQRSMICSAATKQAKEMDLSVVRLMFTAFLPDSDGGFSRRLDPVISDPIFDS
KAPNASNLKIVRMDRTAGCVTGGEEVYLLCDKVQKDDIQVRFYEDDETGLTWEAFGDFSP
TDVHRQFAIVFKTPKYRDLNLQKPTSVFVQLKRKSDNETSEPKPFTYHPQIIDKEEVQRK
RQKTLPNFQDYSGQGGAGGMYRGPGGGGSATGGGPGSGGGGYFQAYSTYNNYGTGYSAGF
SPGMSGGGAGIKHATQGRAEDSGDDCDMGDDPSSGAVVADRAQSEEDASAGETSEERGAG
VELRPGDRTGECMLEARLVDVAERQAEALFHYAVTGDVRYLLAPQRHLMTAQDENGDTGL
HLGVIHSQTDAVRSLAQVLSALPGEEVLNMRNDLYQTPLHLAVITQQKEAAEALVLAGAD
VTLSDRHGNTALHLATQQKEGGMVGFLLRHREVVELVDLPNTAGFCSLHLAVLANSLCSL
RDLLVSGGNVEGQERSCGRTALHLATELDNVSLAGCLLLEGNADVDCCTYNGSSPLHIAA
GRGSVKLTALLMAAGANPHKENFEPLFFREDDCCVDEEEEQDEGYIPGMTPLNMAATPEV
LEILNGKEYKPESTIPVFIPPQGDMRSLGSDTKRALCQALECQGGSWESLANTLGLGILN
SAFRLSPSPASTLLDSYEVSGGMVMDLLEGLRMVENSTALTVLQVALCETEQAPLAPRST
TELLGRVQDLKLDGQEDSGVCDSGVELSTA
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagaggaggcttacctccctcacccacagtactatgacatagagccaatatgg
gatcctctgaattttactcccatgtcactcaccaactcactccggacagcagatggaccc
tacctcgaaatcattgaacagcctaaacagcggggcttcaggttccgttatgggtgtgag
ggaccctctcacggtgggcttccaggggcctccagcgagaagaacaggaagtcatatccc
caggtcaagatctgtaactaccaggggttggcacgtgtggtggtacagctggtgaccaac
tctaaagatgcccacctccatgcccacagtttggtgggcaagcagtgtgacaaaggcatc
tgcatcacagaccaacagcccaaagactccagcatcagtttccccaacctgggcatcctc
catgtgaccaagaagaatgtgattaagacactggaggaccgcatgactgaggcctacagg
gtgggctacaactgtggcattgtcatccaccccgagatagacgccatccagggagaggtt
cgcatcccccgggagctcactgatcaccagagaagcatgatctgcagtgcagcaaccaag
caggctaaagagatggacctaagcgtggtgcgcctcatgttcacagccttcctcccagat
agtgacgggggcttctcccgtagactggaccccgtcatatcagacccaattttcgacagc
aaagctcctaatgcatccaacctgaagattgtgcggatggaccgcacagctggctgtgtg
acaggaggagaagaggtctacctgctctgtgacaaggtccagaaagatgacatccaggtg
cgtttctatgaggatgacgagacagggctgacatgggaggcctttggggacttctccccc
actgatgtccatcgacagtttgccattgttttcaagacccccaaatacagagacctgaac
ctccagaagcccacctcagtgtttgtgcagctgaagcgtaaatcggacaacgagacgagc
gagcccaagcctttcacctaccacccacagatcatagataaggaagaggtgcagaggaaa
agacagaagaccctgcctaatttccaggactacagcggccaaggtggagcagggggcatg
taccggggaccagggggaggaggctccgctacagggggaggacccggctcagggggagga
ggttacttccaggcctattccacctacaataactacggcaccggctatagcgctggcttt
tcccctggcatgagtggtggcggggcgggcattaaacatgctacacagggcagagcggag
gacagcggtgatgactgcgacatgggcgatgacccgtcctctggggcagtggtggcggac
cgagcccagtcggaggaggatgcctctgctggggagacaagtgaggagagaggggctggt
gtggagctacgaccaggggacaggactggcgaatgcatgctggaggctaggctggtggat
gtggctgagaggcaggctgaagccctcttccattacgccgtcactggagacgtccgctac
ctgctggctccacagcgccacctaatgacggctcaggacgagaacggcgacactggtctc
catctaggggtgatccacagccagacagacgcagtcaggagtctagcccaggtgctctct
gccctgcctggagaggaggtcctcaacatgaggaatgacctctaccagactcctttgcac
ctagcggtgataacccagcagaaggaggcggccgaggccctcgtattggctggggctgat
gtcactctgtctgatcgtcacggaaacacagctctacacctggccactcagcagaaggag
ggagggatggtaggatttctactaagacacagagaggtggtggaactagtggacctcccc
aacacagcaggattttgctccctccacctggctgtgctggccaatagcctatgttccctc
agggacctcttggtgagcgggggcaatgtggagggccaggagaggagctgcggccgcacg
gcactccacttggccactgagctggacaacgtctccctggcaggctgcctgctactggag
gggaatgctgatgtggactgctgcacctacaacggctccagccctctccacatagcagca
ggccggggctctgtcaaactgaccgctctcctcatggctgcaggtgccaatcctcacaaa
gaaaacttcgagcccctgttcttcagagaggatgactgctgtgtggatgaggaagaggag
caggatgaaggctacatcccagggatgactcctcttaacatggctgccactcctgaggtg
ttggaaattctgaatggcaaagagtacaagccagagtccaccatcccagtcttcatcccc
cctcaaggcgacatgcggagcctgggctcagacacaaagcgggcattatgccaggccctt
gagtgccagggggggagctgggagagcctggcgaacacgctggggctgggcatcctcaac
agcgccttcagactcagcccctcccccgccagcacactgctggacagctacgaggtatct
gggggaatggtcatggaccttttggagggactcaggatggtggagaactccaccgcgttg
acagtactgcaggtggcactgtgtgaaacggagcaggctcctctagctccccgaagcacc
acagagctcttaggacgtgtccaggatctgaagctggacggacaggaggacagtggcgtg
tgtgacagtggggtggagctctccacagcgtga
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