Oncorhynchus kisutch (coho salmon): 109865686
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Entry
109865686 CDS
T09179
Name
(RefSeq) exportin-1
KO
K14290
exportin-1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03008
Ribosome biogenesis in eukaryotes
oki03013
Nucleocytoplasmic transport
oki03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109865686
03008 Ribosome biogenesis in eukaryotes
109865686
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
109865686
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109865686
03009 Ribosome biogenesis [BR:
oki03009
]
109865686
03016 Transfer RNA biogenesis [BR:
oki03016
]
109865686
03036 Chromosome and associated proteins [BR:
oki03036
]
109865686
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
109865686
Ribosome biogenesis [BR:
oki03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
109865686
Pre-60S particles
109865686
Transfer RNA biogenesis [BR:
oki03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
109865686
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
109865686
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
DUF3385
BspA_v
Motif
Other DBs
NCBI-GeneID:
109865686
NCBI-ProteinID:
XP_031655270
Ensembl:
ENSOKIG00005024422
LinkDB
All DBs
Position
LG20:complement(40299205..40315958)
Genome browser
AA seq
1070 aa
AA seq
DB search
MPANMTMLADHAARQLLDFSQKLDINLLDNVVNSMYYDIGSQQRMAQEVLTNLKDHPDAW
TRVDTILEFSQNMKTKYYALQILETVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDAANV
EKDGVYIAKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMIILKLLSEEVFD
FSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVQATLETLLRFLNWIPLGY
IFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVNQYEEQFVNLFTLTMDQLKQMLPL
NTNIRLAYSNGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRPNLRETLVEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSTSPLLSGSQHFDVPPRRHLYLPVLSKVRTLM
VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTEKL
HNQVNGTEWSWRNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFV
QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQAVQEHLIEKYMLL
PNQVWDSIIQQATKNVDILKDAETVRQLGSILKTNVRACKAVGHPFVVQLGRIYLDMLNV
YKCLSENISSAIQTNGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVGENFVPPL
LEAVLIDYQRNVPAAREPEVLSTMATIVNKLGGHITGEIPKIFDAVFECTLNMINKDFEE
YPEHRTHFFYLLQAVNSQCFPAFLSIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILYTL
LQNVAQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGKIST
SLNPASQNNQGYVQEYVANLLKTAFPHLQDAQVKVFVTGLFSLNQDIPAFKEHLRDFLVQ
IKEFAGEDTTDLFLEERETSLRQAQEEKHKLQMSVPGILNPHELPEEMCD
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgccagcaaacatgacaatgttggcggatcatgcagcaagacagctgctagacttcagt
caaaagctggacatcaatctgctggacaatgtagtcaattccatgtactatgacattgga
tcacagcaacgcatggcccaggaggtgctgaccaacctcaaggatcacccagacgcatgg
acacgagtcgacaccatcctggagttttctcagaacatgaagactaaatactatgcactg
caaattttggagactgtgatcaagacacgctggaagattcttccaagaaatcaatgtgaa
ggaataaagaagtatgtcgttggtctgattatcaagacctcatctgatgccgcaaatgtt
gagaaagatggagtgtacattgcaaaacttaacatgatcctcgtacagatcctgaagcag
gagtggcccaagcactggcctaccttcatcagtgacatcgtgggtgccagccgcaccagt
gagagtctgtgtcagaacaacatgatcatcctcaagctgctcagtgaagaggtctttgac
ttctccagtggacagatgacccaggtcaaggccaagcacctgaaagacagtatgtgcaat
gaattctcgcaaatattccagctctgccagtttgtcatggaaaactcccagaatgcccct
ctggtccaagctacactcgagactctcctgcgtttcctgaactggatccccctggggtac
atatttgagaccaaattgatcagcactctggtgtacaagttcttgaacgtgcccatgttc
cgcaacgtgacgctgaagtgtctgacggagatcgccggcgtgagtgtcaaccagtatgag
gagcagtttgtcaacctcttcacgctcaccatggatcagctcaaacagatgctccccctg
aacaccaacatccgcctggcatattccaatggcaaggacgacgagcagaacttcatccag
aacctcagcctgttcctctgcaccttcctgaaagagcatggacagctcatcgagaagagg
cccaaccttagggagacactcgtggaggctctgcactacatgctgctggtgtctgaggtg
gaggagacagagatctttaagatctgtctggagtactggaatcacctggcggccgagctc
tacagggagagccccttctccacctccacctcccccctgctttctgggagccagcacttt
gacgtgccaccacgccggcacctctacctgcccgtgctctccaaggtgcgtacgctgatg
gtgagccgaatggccaaaccagaggaagtgctggtggtggagaacgaccagggtgaggtg
gtacgagagttcatgaaggacacagactcaatcaacctctataagaacatgagagagaca
ctggtttacctgacccatttggactatgcggacacggagcgcatcatgacggagaagctg
cacaaccaggtcaacgggacagagtggtcgtggaggaacctgaacacgctatgctgggct
atcggctccatcagcggggccatgcacgaggaggacgagaagcgcttcctggtcaccgtc
atcaaggacctgctgggtctctgtgagcagaagagggggaaggacaacaaggccatcatc
gcctcaaacatcatgtacatcgtgggccagtacccacgcttcctccgagcccactggaag
ttcctcaagactgttgttaacaagctctttgagttcatgcacgagactcacgacggcgtg
caggacatggcgtgcgacaccttcattaagatcgcccagaagtgccggcgccactttgtc
caggtgcaggtgggcgaggtgatgcccttcatcgacgagatcctcaacaacatcaacacc
atcatctgtgacctccagccccaacaggtgcacacgttctacgaggcggtaggctacatg
atcggggcccagacggatcaggccgtgcaagagcacctcatcgagaagtacatgctgcta
cccaaccaggtgtgggacagcatcatccaacaggccaccaagaatgtggacatcctgaag
gatgcagagacagtgcgtcagctgggcagcatcctgaagaccaacgtgcgggcctgcaag
gccgtgggacatcccttcgtggtgcagctgggacgcatctacctggacatgctcaatgtc
tacaagtgtctgagtgagaacatctcctctgccatccagaccaacggagagatggtgacc
aagcagccgctgatccggagcatgagaacggtgaagagagaaacgctcaagctgatctcc
ggttgggtcagccgctccaacgacccacaaatggtgggggagaactttgtcccgcccctg
ctggaggccgtactcatcgactaccagcgcaacgtccctgccgccagagagcctgaggtg
ctcagcaccatggcgaccatcgtcaataaactgggcggacacattaccggggagatcccg
aagatcttcgacgcagtcttcgagtgcactttgaacatgatcaataaagactttgaggag
tacccagagcataggacccatttcttctacctcctccaagctgtgaactcgcagtgcttc
ccagccttcctttccattcccccggcccagttcaaactggttctggactccattatctgg
gctttcaaacacaccatgaggaatgttgcagacactggtctgcagattctttacaccctg
ctgcagaacgtggcccaggaggaggctgccgcacagagcttctaccagacctatttctgt
gacatcctccagcatatcttctctgtcgtcacagatacctcgcatacagcagggctaacc
atgcacgcgtccatcctggcctacatgttcaacctggtggaggaaggtaaaatcagcacc
tccctcaacccagccagccagaacaaccagggctacgttcaggagtatgtggccaacctg
ctcaagacagccttcccccatctacaagatgcccaggtgaaggtgtttgtaacaggtcta
ttcagcttgaaccaggatatccccgctttcaaggagcacctgagggacttcctggtgcag
atcaaggagtttgctggcgaagacaccacagacctgttcctggaggagcgggagacgtcg
ctgcggcaggcccaggaggagaaacacaagctgcagatgtccgtccccggcatcctcaac
ccccatgagctccccgaggagatgtgcgactga
DBGET
integrated database retrieval system