Oncorhynchus kisutch (coho salmon): 109865735
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Entry
109865735 CDS
T09179
Name
(RefSeq) integrin alpha-L isoform X1
KO
K05718
integrin alpha L
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04514
Cell adhesion molecules
oki04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
109865735
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
109865735
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oki04147
]
109865735
04515 Cell adhesion molecules [BR:
oki04515
]
109865735
04090 CD molecules [BR:
oki04090
]
109865735
Exosome [BR:
oki04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109865735
Cell adhesion molecules [BR:
oki04515
]
Integrins
Integrin alpha subunits
109865735
CD molecules [BR:
oki04090
]
Proteins
109865735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_1
ITGAX-like_Ig_3
Integrin_A_Ig_2
VWA_2
FG-GAP_3
Copine
FG-GAP_2
Mid2
Motif
Other DBs
NCBI-GeneID:
109865735
NCBI-ProteinID:
XP_031655064
Ensembl:
ENSOKIG00005032471
LinkDB
All DBs
Position
LG20:42939578..42975683
Genome browser
AA seq
1133 aa
AA seq
DB search
MSRQGPLCLLTCMAAMAVSSMAFNIDEANPKLYKGEEQDFFGYKVLQFISGKEKGVMVSA
PYQKNGSGGICRCAQDRTNCTDCYTPQETDTIKYIGLSMVAQPTSPPTFTACSPGLAHEC
DGNSYLNSICYQFNSQLQITSNFTPAFQECTKKIVDLVFLFDGSASMTTEEFNENKGFIN
NIMTTLKNSSIKFAAVQFSSNTRTVFNFRDYQEGRALTQLWKEEHMADLTNTHKAIDFVL
KNIFENQAAGATADATKVLVIITDGNPSDTDKRFNSIERSDKKNIIRFVIGVKNVDLTKL
KSLASEPKENNTFLIQDYNELKGILDNFQKKIFNIEGSKTALAGNLTKEMSQSGFSAVYV
NKDTLVLGSVGSNNWRGSLFETEGLRSEEREIQDPTLDKDSYMGYSVAVGKKNENLLYFT
GAPRSEHMGRILLFNKVNNNWTVAQSLPGEQMGSFFGAELCSVDIDSDGNTDFLLVGAPM
FHQPPREGRIYVYTLTDKLELRMEMNVSVPSQGRFGSSICSLTDLNGDGLKDVAVGAPLE
DDHRGAVYIYLGEKLKGIRPEFSQRISAVMMRSKLQFFGQTIDGKMDLGEDGLTDIVVGA
RGTVVVLRSRPVLSVSAHLHFHPAEISTDNFDCLAKEIISPMVTLTACFNMAEATKSKAE
VLSAGMNVSYSLDVDPVRQRSRAFYSDTNKGARRLLSTVELRKERTCFNHSVYMTQCVID
TLSPIIIQLVFSQSESQQESLTAILNTDSPTQAVVEVPFEKNCKENETCVAELEVDFNFI
TSTLLVVDQSYFNVTIRLSNHGDDSYNTSLTLLYPPGLSFSIMHLLKSTRRTVFSCGGLE
GEMDRTTCSVSLPVYRSKTTAVFTSKFHILNTYDWNNTMEMTVIGLSDNGNSTNSSLTRT
IPVQFAVDLVAKALPQDSTTYMNFTLEDTSPKRLVNVYEVQNLGFKSVPITVTFTFPTKL
EHRFEMKDYQISVLQNHTQCGKIINSTTEYCSPEKYCKSIECESFLLEKFLTVTFVLSGN
VSFKDLNQHARNLSLPKKFTGDRETVHFISFVKLSYDKKRYVQTASDPRDNSSSFHQTQI
DVQAELIIPPHKNLIIGTGVGVGLFLLIIITMAMYMMGCFQRKSLENEENEGE
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggcaaggacccctctgcctgctcacctgcatggcagccatggctgtctcttca
atggctttcaacatcgatgaagcaaacccaaaactctacaaaggggaggaacaggatttc
tttggatacaaagtcctgcaattcatatctggcaaggagaaaggggtaatggtcagtgcg
ccatatcagaagaatggatctggtggaatctgtagatgtgctcaagaccgaacaaactgt
acagactgttacactcctcaagaaactgacacaatcaagtacattggactgtctatggtt
gcacaacctacttctcctccaacgttcactgcctgcagccctggcctggcacacgagtgt
gatgggaactcctatctgaacagtatctgttatcagttcaacagccagctccagatcacc
tcgaactttacacctgctttccaagaatgtactaagaaaatagtggacctcgttttcctc
tttgacggatcagcaagcatgacaacggaagaatttaatgagaacaaaggtttcataaac
aatatcatgacaaccctaaaaaactcctcaattaagttcgcagcggttcagttctcatca
aacaccaggacagttttcaacttcagagactaccaagaggggagagccttgacacaactt
tggaaagaagagcacatggctgatctaaccaacacacataaggcaatagactttgtcttg
aaaaacatttttgaaaaccaagctgccggcgccaccgcagatgcaactaaagtactggtc
ataataacagatggaaatcccagcgatactgataaaaggttcaactctatcgaaagaagt
gataagaaaaacatcatccgctttgtcatcggggtcaagaacgttgatttgacgaaactc
aagtccctggcatcagagccaaaagagaacaacactttcctcatccaggactacaacgaa
ctaaaaggaatcctagacaactttcaaaaaaagatcttcaacattgaaggttccaagact
gctctggctggaaacttgactaaagaaatgtctcagagtgggttcagtgctgtctacgtt
aacaaggacaccttggttctgggctcagtgggatcaaacaactggcgtggatctctcttt
gagactgagggtctgagatcagaggaaagggaaattcaggaccccacattggacaaagat
tcctatatgggatactctgtagctgttgggaagaagaatgagaaccttctatattttacc
ggagcaccaagatctgaacacatgggacggatcctgctttttaacaaggttaacaacaac
tggactgtggcacaaagcttgcctggagaacagatgggctccttcttcggtgcagagctg
tgttctgtggacatagactcagacggcaacacagacttcctcctggtgggtgcaccaatg
tttcaccaacctccgagagagggcaggatctacgtctacacactgactgataagctggaa
ctgaggatggagatgaatgtttcagtgccatctcagggtagattcggctcctccatctgc
tctctcacagacctgaatggagatgggctgaaggatgtagctgtgggcgctccacttgag
gacgatcacaggggggccgtgtacatctacctgggtgaaaagctaaaggggatccgccct
gaattcagccagcgcatctcagctgtgatgatgagatctaagctccagttctttggccag
acgattgatgggaagatggacctgggtgaggatggactgactgatatcgtagtaggagcg
cgtggtacagttgttgtcttgaggtccagaccggtcctcagcgtctctgctcatctccac
ttccatcccgcagagatcagcactgataactttgactgtctggcaaaagagataatttcc
cccatggtcacgttaacagcctgctttaacatggcagaggcaacaaagagtaaagctgag
gtgctgagtgcagggatgaacgtctcctactcgctggatgtggatccagtgagacagagg
agccgagccttttacagtgacacaaacaaaggggccagaagacttctctctacagtggag
ctgagaaaggagcggacttgcttcaaccactcagtctacatgacacaatgcgtgatcgac
acattatcgcccataatcatccaattagttttttctcaatctgaaagccaacaagagagt
cttactgccattctgaacactgacagtcctacacaggctgtggtcgaggtgccctttgaa
aagaactgcaaagaaaatgaaacctgtgtggcagagcttgaggtggacttcaactttatc
acatcaactttattagtggtggaccagagttacttcaacgtgactataagactgtccaat
cacggggatgactcatacaacaccagtctaactctcctctaccctcctggcctctcattt
tccattatgcatcttctgaagtctacaaggagaacggtgttcagctgtggtggtctggaa
ggtgaaatggacagaactacatgcagtgtgagcctccctgtctaccgtagtaaaaccaca
gcagtgttcaccagtaaattccatattttgaatacatacgactggaacaacacaatggag
atgaccgtcatcggcctgagtgacaacggaaactcaaccaatagttcccttaccaggacc
atccctgttcaatttgcagttgacctggtagcaaaagcccttccccaagactccaccact
tacatgaactttactctggaggacacatcacctaaaagactggtgaatgtatacgaggtg
cagaacttgggatttaagtctgtaccaatcacagtcaccttcactttcccaactaagctt
gagcacagatttgaaatgaaggactaccaaatatctgtcttacagaaccatactcaatgt
ggaaagattatcaattcaacaacagagtactgctctccagaaaaatactgcaagtccatc
gagtgtgaaagtttccttttggagaagtttttgacagttacatttgtgctgtctggaaat
gtttccttcaaggacctcaatcaacatgcaaggaacttgtcattgccaaagaaattcact
ggggatagagaaacagtccatttcatcagttttgtcaaactcagctatgacaaaaaacga
tatgtccagacagcgagtgacccaagggataactcttcaagcttccaccaaacacagatt
gatgttcaggctgagctcatcattcctccccataaaaacctgataatagggacaggagtt
ggagtaggactcttcctcctgatcatcatcacaatggccatgtatatgatgggatgcttc
cagagaaaaagccttgagaatgaagagaatgaaggggaatag
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integrated database retrieval system