KEGG   Oncorhynchus kisutch (coho salmon): 109865735
Entry
109865735         CDS       T09179                                 
Name
(RefSeq) integrin alpha-L isoform X1
  KO
K05718  integrin alpha L
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki04514  Cell adhesion molecules
oki04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:oki00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    109865735
 09140 Cellular Processes
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    109865735
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oki04147]
    109865735
   04515 Cell adhesion molecules [BR:oki04515]
    109865735
   04090 CD molecules [BR:oki04090]
    109865735
Exosome [BR:oki04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   109865735
Cell adhesion molecules [BR:oki04515]
 Integrins
  Integrin alpha subunits
   109865735
CD molecules [BR:oki04090]
 Proteins
  109865735
SSDB
Motif
Pfam: VWA FG-GAP Integrin_A_Ig_1 ITGAX-like_Ig_3 Integrin_A_Ig_2 VWA_2 FG-GAP_3 Copine FG-GAP_2 Mid2
Other DBs
NCBI-GeneID: 109865735
NCBI-ProteinID: XP_031655064
Ensembl: ENSOKIG00005032471
LinkDB
Position
LG20:42939578..42975683
AA seq 1133 aa
MSRQGPLCLLTCMAAMAVSSMAFNIDEANPKLYKGEEQDFFGYKVLQFISGKEKGVMVSA
PYQKNGSGGICRCAQDRTNCTDCYTPQETDTIKYIGLSMVAQPTSPPTFTACSPGLAHEC
DGNSYLNSICYQFNSQLQITSNFTPAFQECTKKIVDLVFLFDGSASMTTEEFNENKGFIN
NIMTTLKNSSIKFAAVQFSSNTRTVFNFRDYQEGRALTQLWKEEHMADLTNTHKAIDFVL
KNIFENQAAGATADATKVLVIITDGNPSDTDKRFNSIERSDKKNIIRFVIGVKNVDLTKL
KSLASEPKENNTFLIQDYNELKGILDNFQKKIFNIEGSKTALAGNLTKEMSQSGFSAVYV
NKDTLVLGSVGSNNWRGSLFETEGLRSEEREIQDPTLDKDSYMGYSVAVGKKNENLLYFT
GAPRSEHMGRILLFNKVNNNWTVAQSLPGEQMGSFFGAELCSVDIDSDGNTDFLLVGAPM
FHQPPREGRIYVYTLTDKLELRMEMNVSVPSQGRFGSSICSLTDLNGDGLKDVAVGAPLE
DDHRGAVYIYLGEKLKGIRPEFSQRISAVMMRSKLQFFGQTIDGKMDLGEDGLTDIVVGA
RGTVVVLRSRPVLSVSAHLHFHPAEISTDNFDCLAKEIISPMVTLTACFNMAEATKSKAE
VLSAGMNVSYSLDVDPVRQRSRAFYSDTNKGARRLLSTVELRKERTCFNHSVYMTQCVID
TLSPIIIQLVFSQSESQQESLTAILNTDSPTQAVVEVPFEKNCKENETCVAELEVDFNFI
TSTLLVVDQSYFNVTIRLSNHGDDSYNTSLTLLYPPGLSFSIMHLLKSTRRTVFSCGGLE
GEMDRTTCSVSLPVYRSKTTAVFTSKFHILNTYDWNNTMEMTVIGLSDNGNSTNSSLTRT
IPVQFAVDLVAKALPQDSTTYMNFTLEDTSPKRLVNVYEVQNLGFKSVPITVTFTFPTKL
EHRFEMKDYQISVLQNHTQCGKIINSTTEYCSPEKYCKSIECESFLLEKFLTVTFVLSGN
VSFKDLNQHARNLSLPKKFTGDRETVHFISFVKLSYDKKRYVQTASDPRDNSSSFHQTQI
DVQAELIIPPHKNLIIGTGVGVGLFLLIIITMAMYMMGCFQRKSLENEENEGE
NT seq 3402 nt   +upstreamnt  +downstreamnt
atgtccaggcaaggacccctctgcctgctcacctgcatggcagccatggctgtctcttca
atggctttcaacatcgatgaagcaaacccaaaactctacaaaggggaggaacaggatttc
tttggatacaaagtcctgcaattcatatctggcaaggagaaaggggtaatggtcagtgcg
ccatatcagaagaatggatctggtggaatctgtagatgtgctcaagaccgaacaaactgt
acagactgttacactcctcaagaaactgacacaatcaagtacattggactgtctatggtt
gcacaacctacttctcctccaacgttcactgcctgcagccctggcctggcacacgagtgt
gatgggaactcctatctgaacagtatctgttatcagttcaacagccagctccagatcacc
tcgaactttacacctgctttccaagaatgtactaagaaaatagtggacctcgttttcctc
tttgacggatcagcaagcatgacaacggaagaatttaatgagaacaaaggtttcataaac
aatatcatgacaaccctaaaaaactcctcaattaagttcgcagcggttcagttctcatca
aacaccaggacagttttcaacttcagagactaccaagaggggagagccttgacacaactt
tggaaagaagagcacatggctgatctaaccaacacacataaggcaatagactttgtcttg
aaaaacatttttgaaaaccaagctgccggcgccaccgcagatgcaactaaagtactggtc
ataataacagatggaaatcccagcgatactgataaaaggttcaactctatcgaaagaagt
gataagaaaaacatcatccgctttgtcatcggggtcaagaacgttgatttgacgaaactc
aagtccctggcatcagagccaaaagagaacaacactttcctcatccaggactacaacgaa
ctaaaaggaatcctagacaactttcaaaaaaagatcttcaacattgaaggttccaagact
gctctggctggaaacttgactaaagaaatgtctcagagtgggttcagtgctgtctacgtt
aacaaggacaccttggttctgggctcagtgggatcaaacaactggcgtggatctctcttt
gagactgagggtctgagatcagaggaaagggaaattcaggaccccacattggacaaagat
tcctatatgggatactctgtagctgttgggaagaagaatgagaaccttctatattttacc
ggagcaccaagatctgaacacatgggacggatcctgctttttaacaaggttaacaacaac
tggactgtggcacaaagcttgcctggagaacagatgggctccttcttcggtgcagagctg
tgttctgtggacatagactcagacggcaacacagacttcctcctggtgggtgcaccaatg
tttcaccaacctccgagagagggcaggatctacgtctacacactgactgataagctggaa
ctgaggatggagatgaatgtttcagtgccatctcagggtagattcggctcctccatctgc
tctctcacagacctgaatggagatgggctgaaggatgtagctgtgggcgctccacttgag
gacgatcacaggggggccgtgtacatctacctgggtgaaaagctaaaggggatccgccct
gaattcagccagcgcatctcagctgtgatgatgagatctaagctccagttctttggccag
acgattgatgggaagatggacctgggtgaggatggactgactgatatcgtagtaggagcg
cgtggtacagttgttgtcttgaggtccagaccggtcctcagcgtctctgctcatctccac
ttccatcccgcagagatcagcactgataactttgactgtctggcaaaagagataatttcc
cccatggtcacgttaacagcctgctttaacatggcagaggcaacaaagagtaaagctgag
gtgctgagtgcagggatgaacgtctcctactcgctggatgtggatccagtgagacagagg
agccgagccttttacagtgacacaaacaaaggggccagaagacttctctctacagtggag
ctgagaaaggagcggacttgcttcaaccactcagtctacatgacacaatgcgtgatcgac
acattatcgcccataatcatccaattagttttttctcaatctgaaagccaacaagagagt
cttactgccattctgaacactgacagtcctacacaggctgtggtcgaggtgccctttgaa
aagaactgcaaagaaaatgaaacctgtgtggcagagcttgaggtggacttcaactttatc
acatcaactttattagtggtggaccagagttacttcaacgtgactataagactgtccaat
cacggggatgactcatacaacaccagtctaactctcctctaccctcctggcctctcattt
tccattatgcatcttctgaagtctacaaggagaacggtgttcagctgtggtggtctggaa
ggtgaaatggacagaactacatgcagtgtgagcctccctgtctaccgtagtaaaaccaca
gcagtgttcaccagtaaattccatattttgaatacatacgactggaacaacacaatggag
atgaccgtcatcggcctgagtgacaacggaaactcaaccaatagttcccttaccaggacc
atccctgttcaatttgcagttgacctggtagcaaaagcccttccccaagactccaccact
tacatgaactttactctggaggacacatcacctaaaagactggtgaatgtatacgaggtg
cagaacttgggatttaagtctgtaccaatcacagtcaccttcactttcccaactaagctt
gagcacagatttgaaatgaaggactaccaaatatctgtcttacagaaccatactcaatgt
ggaaagattatcaattcaacaacagagtactgctctccagaaaaatactgcaagtccatc
gagtgtgaaagtttccttttggagaagtttttgacagttacatttgtgctgtctggaaat
gtttccttcaaggacctcaatcaacatgcaaggaacttgtcattgccaaagaaattcact
ggggatagagaaacagtccatttcatcagttttgtcaaactcagctatgacaaaaaacga
tatgtccagacagcgagtgacccaagggataactcttcaagcttccaccaaacacagatt
gatgttcaggctgagctcatcattcctccccataaaaacctgataatagggacaggagtt
ggagtaggactcttcctcctgatcatcatcacaatggccatgtatatgatgggatgcttc
cagagaaaaagccttgagaatgaagagaatgaaggggaatag

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