Oncorhynchus kisutch (coho salmon): 109872213
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Entry
109872213 CDS
T09179
Name
(RefSeq) glutamate decarboxylase 1 isoform X1
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki00250
Alanine, aspartate and glutamate metabolism
oki00410
beta-Alanine metabolism
oki00430
Taurine and hypotaurine metabolism
oki00650
Butanoate metabolism
oki01100
Metabolic pathways
Module
oki_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
109872213
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
109872213
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
109872213
00430 Taurine and hypotaurine metabolism
109872213
Enzymes [BR:
oki01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
109872213
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Beta_elim_lyase
SepSecS
Chlam_OMP3
DTX3L_a-b
Motif
Other DBs
NCBI-GeneID:
109872213
NCBI-ProteinID:
XP_020318954
Ensembl:
ENSOKIG00005049323
LinkDB
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Position
LG27:9393579..9429174
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AA seq
588 aa
AA seq
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MATSEPTAAGGDQDPNSANLRPSSTNYDAWMQGCTRKLGMKICGFLQKNNSLGEEGRLAG
SLSERQKNLFSCVNSDRDARFCRTETDFSNMFARDLLPAKNGEEATMQFLLELVDILTNY
VRKSFDRSTKVLDFHHPHQLLEGMEGFNLELSDQPESLEQILVDCRDTLKYGVRTGHPRF
FNQLSTGLDIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQLTLKKMREIIGWPPGEGDGI
FSPGGAISNMYSVMIARYKYFPEVKTKGMSAAPRLVLFTSEHSHYSIKKAGAALGFGSEN
VVLLSTDERGRVIPADLEAKILDVKQKGYHPLFVNATAGSTVYGAFDPINEIADICEKYN
MWLHVDGAWGGGLLMSRKHRHKFSGVERANSVTWNPHKMMGVPLQCSAILVREKGILAGC
NSMCAGYLFQPDKQYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTIGFEQHIDKCLDLS
QYLYDKIRNREGYEMVFDGVPQHTNVCFWYIPPSLRGMEHNSKEYREKLHKVAPNIKAMM
MESGTTMVGYQPQGQKVNFFRMVISNPAALQSDIDFLIDEIERLGRDL
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggccacgtctgaaccgacagccgctggcggggaccaggaccccaactccgccaattta
cgaccttcatccacaaactatgacgcgtggatgcaaggatgcacgcggaaactggggatg
aagatctgtgggttcctgcagaagaataacagtctaggggaggaaggccggctcgcaggc
tcgctctcagaacgccagaagaacctgttctcctgtgtcaacagcgaccgggatgcgcgc
ttctgccgcactgagaccgatttctccaacatgtttgcgagagatttacttcccgccaaa
aatggagaagaggccactatgcagttcttattggaacttgtggacatcctcaccaactac
gtcaggaagtcgtttgaccgttccaccaaggttctggacttccaccatccgcatcagctg
cttgagggcatggagggcttcaacctcgagctctctgaccagccagagtcccttgagcag
atccttgtggactgcagggacacgctcaagtacggcgtgcgaacaggtcatccgcggttc
ttcaaccaactctctactgggctggacatcattgggctggctggggagtggctcacctct
acagccaacacaaacatgttcacctatgagatcgctccagtgtttgtcctgatggagcag
ctgacgctgaagaagatgagagagattattggctggcccccaggagagggggacggaata
ttctcaccagggggtgccatctctaacatgtacagtgtgatgatcgctcgctacaagtac
ttccctgaggtcaagaccaagggcatgtctgccgctccccgtctggtgcttttcacatca
gaacatagccactactctatcaagaaggcaggggcagctctgggctttggctcagagaac
gtggtcctgctgagcacagatgagagggggagagttattcctgctgatctagaagctaag
atcctcgatgtcaagcagaagggttatcatccactgtttgtgaatgctacagctggttcc
actgtttacggagcatttgaccccatcaatgagatcgctgacatctgcgagaaatacaac
atgtggttgcacgtagacggtgcatggggaggtggtctcctgatgtccaggaagcatcgc
cataagttcagtggtgttgagagggctaactctgtcacgtggaatcctcacaagatgatg
ggagtgcctctacagtgctccgccatcctggtcagagagaagggtattctggcgggctgt
aactcgatgtgtgcagggtacctgttccagcctgataaacagtatgatgtcagctatgac
acgggtgacaaagccatccagtgtgggcgccacgttgacatctttaagttctggctcatg
tggaaggccaagggcaccataggatttgagcagcacattgacaagtgtctggacctgtct
cagtacctctacgacaagatcaggaacagagagggatacgagatggtgttcgatggagtg
ccccagcacaccaatgtatgtttctggtacattccacccagcctgagaggcatggaacac
aacagcaaagagtatcgagagaaacttcacaaggtggcgcccaatatcaaagcaatgatg
atggagtctggtacgaccatggtgggctaccagcctcagggccagaaggtcaacttcttc
cgcatggtcatctccaaccctgcagccctccagtcagacatcgacttccttattgacgag
atcgagaggctggggcgtgacctgtag
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