Oncorhynchus kisutch (coho salmon): 109873013
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Entry
109873013 CDS
T09179
Name
(RefSeq) sialidase-3-like isoform X1
KO
K12357
sialidase-2/3/4 [EC:
3.2.1.18
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki00511
Other glycan degradation
oki00600
Sphingolipid metabolism
oki01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
109873013
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
109873013
Enzymes [BR:
oki01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.18 exo-alpha-sialidase
109873013
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Gene cluster
GFIT
Motif
Pfam:
BNR_2
BNR_3
BNR
Motif
Other DBs
NCBI-GeneID:
109873013
NCBI-ProteinID:
XP_020320077
Ensembl:
ENSOKIG00005049685
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All DBs
Position
LG28:complement(7564169..7569733)
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AA seq
437 aa
AA seq
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MEEQVFSMFCTLSVLPRQFTDMQEPGHLAMGNTSSRSYFPGIKMQPAKTTLFKREQTGTT
YRIPALIYLKESQTFLAFAEKRSSPSDIDAKLIVMRRGTQQNGSTQWSESQELLSACLPD
HRTMNPCPVYEKNTKTLFLFFICILGNTPEHHQICTGKNKAHLCYITSNDEGQSWSQTKD
LTESVIGKTVRRWATFAVGPGHGIQMESGRLIIPTYAYYIHCKCFSFPFPFTVQPHALSI
YSDDFGQTWQRGRMLQRKSCECEMAEIIDHEGSSHLYCNARHRGHRVEALSESSGVYFDK
PRLAPRLVEPCHGGCQGSVIGFPAPEQGEEGMGGTTSPPLASDTQTWLLFTHPTNKRTRK
DLGVYLNRSPLHTSGWDQPWIIHSGPSGYSDLAYIEDTEHFACLMECGENSELEQIAFVS
FPLSDVMQTVDEKGNTF
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggaagagcaggtgttctcaatgttttgtacactcagtgtattaccacggcagtttaca
gatatgcaggaaccaggacatttagctatggggaatacctcatcaaggagttatttcccg
ggaatcaaaatgcaacctgctaaaacgactctgttcaaacgggagcaaactgggacgaca
tacagaataccagctctcatctacctaaaagagagtcagacgttccttgcctttgcagag
aagcgctcttcccccagtgacattgatgcaaaacttattgttatgaggagaggcactcaa
caaaatggatccactcagtggtcagaatcccaggagctattatcagcatgtttaccagac
caccgcaccatgaacccctgcccggtgtatgagaagaataccaagactctattcctattt
ttcatctgcattttgggtaacactccagagcaccatcagatctgtacaggcaagaataag
gcacacctgtgttacatcaccagtaatgatgagggccagagctggagccagacaaaggac
ttgacagagagtgtgataggcaaaacggtcagaaggtgggctacatttgctgtgggacca
ggccatggcattcaaatggagagtggaagattgatcattcctacctatgcctattatatc
cactgcaaatgcttctccttccccttccccttcacggtacaaccacatgctctctcaata
tacagtgacgacttcggtcagacatggcaaaggggcaggatgcttcaaagaaagtcctgt
gaatgtgagatggcagagatcatagaccacgagggcagcagtcacctgtactgcaacgcc
cgccatagaggtcacagagtggaagctttgagtgagagcagtggggtttactttgacaag
ccccgcttggctccaaggttagtggagccgtgccacggtggttgccaaggcagtgtgatt
ggcttccctgcccctgagcaaggtgaagagggtatgggtggtaccacatcaccaccactg
gcctcagacacgcaaacctggctactcttcacccacccgaccaataagaggacgaggaaa
gacttgggagtgtatttgaaccgttccccactgcacacgtcaggttgggaccagccctgg
atcatccacagtggacccagtggctactcagacctggcctacattgaggacacggagcac
tttgcttgcctgatggaatgtggtgagaatagtgagcttgaacagattgcctttgtgtct
tttcccctcagtgatgtcatgcagaccgttgacgagaaaggaaataccttctag
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