Oncorhynchus kisutch (coho salmon): 109874355
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Entry
109874355 CDS
T09179
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04020
Calcium signaling pathway
oki04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
109874355
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
109874355
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oki04040
]
109874355
Ion channels [BR:
oki04040
]
Ligand-gated channels
Glutamate (ionotropic)
109874355
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
109874355
NCBI-ProteinID:
XP_031665148
Ensembl:
ENSOKIG00005036255
LinkDB
All DBs
Position
LG29:complement(23123677..23152246)
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AA seq
972 aa
AA seq
DB search
MRLFLLAVFLSCSCARAGCEPKIVNIGAVLSQKRYEQVFKDAVTQANQIYGRDKFKLTAI
SVTHKPNAIQMALSVCEDLISNQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVVGLTT
RMSIYSDKSIHLSFLRTVPPYSHQAHVWFDMMREFRWNHIILIVSDDHEGRAAQKRLETL
LEERETKNKKRNYENLDQLSYDNKRGPKAEKVLQFSQETNLTALLLEAKELEARVIILSA
SEEDAAAVYKAARFLNMTGSGYVWLVGEREMSGKALSEAPDGLIGLQLINGKNESAHIND
AVAVVAQSIQELFEKENITEPPRGCVGNTNIWKTGPLFKRVLMSSKYPEGLTGRVEFNDD
GDRKYAHYSILNYQKSRLIQVGIYNGTQVVMNNQRKIIWPGGETEKPRGFQMSTRLKIVT
IHQEPFVYVKPTEQDGTCKEEKTLNGVADIKKVICTGPNETIPGNTTGRPIVPQCCYGFC
IDLLIKLAGTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTI
NNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYL
LDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGF
AMIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVEL
STMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFG
IGMRKDSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFML
VAGGIAAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDSKEASGSQAVGASMT
PSLPSSSLETQDDRKSGRAEPPDPKKKASFRSISTSLASSIKRRRSSKDTQYPPTDITGQ
LNLSDPSVSTVV
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttgtttctgctggcggtgttcctctcgtgctcctgtgcgcgggctggctgcgag
ccaaagatagtgaacatcggagccgtcctgagccagaagaggtacgagcaagtctttaag
gatgcagtgacccaggcgaaccagatatacgggagagataaattcaagttgaccgccatc
tccgtaacgcacaaacccaacgctatccagatggctctctccgtctgcgaggacctcatc
tccaaccaggtgtatgccatcctggtgagtcatcctccccagtccaacgaccacctcacc
cccacgcctgtgtcctacaccgcaggcttctaccgcatccctgttgtgggcctcaccaca
cgcatgtccatctactccgacaagagtatccacttgtcttttctgcggactgtccccccg
tactcccaccaggctcacgtgtggttcgacatgatgcgagagtttcgatggaaccacatc
atcctgatcgtcagcgatgaccacgaggggcgggccgcgcagaaaagactggagacccta
ctggaggagagggaaacaaagaataaaaaaaggaactatgaaaacctcgaccaactgtcc
tatgacaacaagcgaggaccaaaggcagagaaagtcctccagttcagccaggagactaac
ttaactgcgctgcttctagaggccaaagagctggaggctcgcgtcatcatcctctccgcc
agtgaagaggacgctgctgcagtttacaaggctgcccgtttcctcaacatgacgggctcg
ggttacgtgtggctggtgggagagcgggagatgtcgggtaaagccctgagtgaggcacca
gatggtctcattggcctccagctcatcaacggcaagaacgagtcggcccacatcaatgac
gcagtggctgtggtggcccagtccatccaggagctctttgagaaggagaacattactgag
ccgcccagaggctgcgtgggaaacaccaacatctggaagaccgggcccctcttcaaaagg
gttctgatgtcatcaaagtacccagagggcctcactggacgagtggaattcaatgacgat
ggcgacaggaagtacgctcactacagcattctcaactaccagaagagtcgactcattcaa
gttgggatttacaatggaacacaggtggtgatgaataatcagaggaagatcatctggccg
ggaggagagacagagaaaccgcggggctttcagatgtccacgagactaaagatagtgacc
atacaccaggagccctttgtgtatgtgaaacccactgagcaggatggaacctgcaaggag
gaaaaaaccttaaatggagtggcagatattaaaaaggtgatctgcactggaccaaatgag
accatcccaggtaacacaacaggacgtccaattgtacctcaatgttgttatggattctgt
attgacctacttatcaagttggctggaaccatgaactttacctatgaagtacacctggtg
gctgatgggaaatttggaacacaggagcgggtgaacaacagcaacaagaaagagtggaat
ggcatgatgggagagctcctggggggtctggcagatatgatcgttgccccgctgacgata
aacaacgaacgagcccagtacatcgaattctccaaaccgtttaagtaccaaggcctaacc
atccttgttaaaaaggaaatccctcgcagtacactggactcgttcatgcagccgtttcag
agcacactgtggctgctggtgggtctttcggtgcatgtggtggcggtgatgctttaccta
ctagaccggttcagcccgtttgggaggtttaaagtaaacagtgaagaagaagaagaagac
gccctcaccttgtcgtcagccatgtggttctcctggggagtgttgcttaactccggtatt
ggagaaggcgcgccgcgcagcttctcagcgagaatcttgggcatggtgtgggccggcttt
gccatgatcatagtggcatcgtatactgccaacctggctgccttcctggtgctggaccgg
cctgaggagcgcatcaccggcatcaacgacccgaggctgaggaacccatcagacaagttc
atctatgccacagtgaagcagagctctgtggacatctacttccggcggcaggtggagctt
agcaccatgtaccgccacatggagaagcacaactacgagagtgccgctgaggctatccag
gccgtgcgcgacaacaagctgcatgctttcatctgggactctgcggtgctggagtttgaa
gcctcgcagaagtgcgacctggtgaccacgggagagctgtttttccgttcgggctttggc
ataggcatgcgcaaggacagcccctggaaacagaatgtgtccctggccattctcagttcc
catgagaatggcttcatggaagatctagataaaacctgggtgagataccaggagtgtgac
tcacggagcaatgccccagccacactcacctttgagaacatggcaggagtgttcatgctg
gtggctggaggcatagcagcagggatcttcctcatctttattgagatcgcctacaagcga
cacaaagacgcccgaaggaagcagatgcagctggcctttgcggccgtcaacgtctggagg
aagaacctgcaggacagtaaggaggcctctgggagccaagctgtgggcgcatcgatgacc
ccatcattaccctcttcctctctagagactcaggatgataggaaaagtggtagagcagag
ccccccgaccccaaaaagaaagcctcttttaggtccatcagtacctccctggcctccagc
atcaagagacgtaggtcatccaaagacacgcagtacccacccaccgacatcacgggccag
ctcaacctgtccgacccgtctgtcagcacggtggtgtga
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