Oncorhynchus kisutch (coho salmon): 109887305
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Entry
109887305 CDS
T09179
Name
(RefSeq) farnesyl pyrophosphate synthase-like isoform X1
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki00900
Terpenoid backbone biosynthesis
oki01100
Metabolic pathways
Module
oki_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
109887305
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
oki01006
]
109887305
Enzymes [BR:
oki01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
109887305
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
109887305
Prenyltransferases [BR:
oki01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
109887305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
MAAL_C
Motif
Other DBs
NCBI-GeneID:
109887305
NCBI-ProteinID:
XP_031693436
Ensembl:
ENSOKIG00005000578
LinkDB
All DBs
Position
LG2:3452859..3456832
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AA seq
363 aa
AA seq
DB search
MFILSACGDSSCSNGTHHSGAVQSDPQLFEAQFEELVTELTEQDLTDSVLADALNRLREV
LHYNTPGGKRNRGLSVIGSLRELVPPTELTQDAVRRALLVGWCIELLQAFFLVADDIMDA
SVTRRGQPCWYKRERVGLDAINDSFLLEGSIYRLLRRHCRAQPYYVHLLELFTETSFQTE
LGQALDLMTAPPGQIDLNRFTMERYKAIVKYKTAFYSFYLPVAAAMYMAGIDSEEEHNNA
KHILLEMGEFFQIQDDYLDCYGDPAVTGKIGTDIQDNKCGWLVVTALGVMTPEQRAELES
CYGRHDSVEKVKALYNTLQMPTLYHQYEDDSYQRLQKLIARHAQNLPHAVFLNFAKKIYK
RNK
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgttcatcctgtctgcttgtggtgacagtagttgcagcaacgggacccaccactcgggg
gcggtgcagtcagacccacagctgtttgaggcccagtttgaggagctggtgaccgagctc
acagagcaggacctcacagactctgtcctcgctgacgctctcaacagactccgagaggtg
ttgcattacaacactcctggaggaaaaagaaacagaggtctgtctgtgattggctctttg
agggagcttgttcctcccactgagctgacccaggatgctgtgcgacgggccttgctggtt
ggctggtgcattgagctgctccaggcgttcttcttggtagctgatgacatcatggatgct
tcagtgactcggagaggtcagccctgctggtacaagagggagagagtgggtctggatgcc
atcaatgattctttcctcctggagggatccatctacagactactgcgcagacactgtagg
gcacagccctactacgtacacctattggagctcttcactgagacgtccttccagaccgag
ctgggccaggcactggacctgatgaccgctcctcctggtcaaatagacctcaaccgcttc
accatggagagatataaggccatagtaaagtacaagactgccttctactccttctacctc
cctgtggcagcagccatgtacatggcgggtatcgacagtgaagaggaacacaacaacgcc
aaacatatcttactggagatgggagagttcttccagatacaggatgactacctggattgc
tatggcgacccggcggtgacagggaagattggaacagacatccaggacaacaaatgcggc
tggctggtggtgaccgctctaggggtcatgaccccggaacaaagggcagagctggagtca
tgttatggtcggcatgacagtgtggagaaggtgaaagcactgtacaacaccctacagatg
cccaccctgtaccaccaatacgaagacgacagctatcagcgcttacagaaactcatcgcg
cgtcacgcccaaaaccttccacacgcagttttcctcaactttgccaagaaaatctacaag
agaaacaagtga
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