Oncorhynchus kisutch (coho salmon): 109887424
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Entry
109887424 CDS
T09179
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C-like
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04020
Calcium signaling pathway
oki04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
109887424
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
109887424
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oki04040
]
109887424
Ion channels [BR:
oki04040
]
Ligand-gated channels
Glutamate (ionotropic)
109887424
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
NMDAR2_C
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
109887424
NCBI-ProteinID:
XP_031655706
Ensembl:
ENSOKIG00005017827
LinkDB
All DBs
Position
LG20:complement(12452945..12488525)
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AA seq
1258 aa
AA seq
DB search
MGASLEQQIVCMFKLMEEYDWGDFVVITSMLPGYETFVDYVRSYTDTSYFLWRLQDILSL
EMSIGTSDVRAKRMLQQIDSQVLVAYCSHEEAQYLFQVAGEVGLLGPGYIWILPSLALGN
TESPSPSSFPIGVIGVITDQWRKSLRQRVREGVAIVAKGAESFKRHQGFVPEGHSDCNTP
VTHIDNNTLFRHMLNVTWERKDLSFNSDGYLTNPSMVIIALNRDRQWDKVGTLERGILQV
RYPVWPRYGSFLEPVSDDRHLTVATLEERPFVIVENVDPDTGTCVRNTVPCRRQSNRTES
LVGHSEPYTKLCCKGFCIDILKKLSRTIKFSYDLYLVTNGKHGKMISGIWNGMIGEVFYR
KADMAIGSLTINEERSEIIDFSVPFVETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFV
MCLTVVAVTVFVFEYFSPVGYNRSLVSAKAAGGPTFTIGKSVWLLWGIVFNNSVPIENPK
GTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEQYIDTVSGLSDKKFQKPQEHYPPFRFG
TVPNGSTERNIRSNYPDMHAHMVKYNQKGVEDALNSLKTAKLDAFIYDAAVLNYMAGKDE
GCKLVTIGSGKVFATTGYGIALQKDSRWKRPIDLALLQFLGDGDTQRLETVWLSGICQNE
KNEVMSSKLDIDNMAGVFYMLLVAMGLSLLVFSWEHLLYWKLHKELDKSPRMDFLLAISR
GIYSCFNGVEEPDLPNLANPDLTANYAQANMLKMLRTAKDLVNSAQVETSLDHASKTIEH
WGRHGGSLPVHIPQQGTTETVPGGFAYVTENTHLPPERPLSPQYCTLGVVTSVNQQRGLA
RPTPLRYTLPARTSSLYDRPLPVSSLICPHLDLAGGDRLSSYPHPSTGRLYVEPQHLSHP
RSPFIPYSELQLPDIYLSSHPPSAVSHPPHTEPSKRKRRSKSLLSGETGRGGGQRRRRRE
EKTVCLAELRANHLQENHVSPHMPDSLYPGAVLCPGEEGCGGSWPLPLEELVLAGRRRRH
RRPSFLRATWGSEQIRQPDDTPPTSLDSQSHSALPDLFPRVMVDQETPTKLYNPTPFRNN
LCYPAASPRQHAYLHIRQDQRKGNSRKKLRHSHSTHLPTYREAVLGGQGGGGGVGLGVVR
RTTSLLSRQYNDYLTSYPGLPLYHSPLNFQTHSPASSNHPSPGTYRIPSPVCQLLACGGG
CRSQRGLLYQDSLYGAYGGAQDPDIEPQRGEGLVGLRSEDRPCVTRPWGKVSSLESEV
NT seq
3777 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcatcactggaacagcagattgtctgcatgttcaagttgatggaggagtatgac
tggggagactttgtagtcatcacaagcatgttgccgggatacgagacatttgtggactat
gtacgctcctacacggacacttcctacttcctgtggaggctgcaggatatcctgtctctg
gagatgtctatcgggaccagcgacgtccgcgccaaacgcatgttacagcagattgattcc
caggtactcgtagcctactgctcccatgaagaggcccagtacctgttccaggtagcaggg
gaggtgggtctattggggcctggctacatctggatcctcccctccctcgcgttgggcaac
acagagagcccttcacctagcagcttccccataggagtgattggcgtcatcaccgaccaa
tggaggaagagcctgaggcagcgggtcagagagggagtggccatagtggccaaaggggcg
gagagtttcaagaggcatcaggggtttgttcccgagggacacagcgactgcaacacacca
gttacacacattgacaacaacacactgttcagacacatgctgaacgtgacatgggagcgt
aaggacctgtcgtttaatagtgatggttacctgacaaacccttccatggtcatcatcgct
ttgaacagagacagacagtgggacaaggtggggacattagagcggggtatcctccaggtg
cgttatccggtgtggcctcgatatggtagtttcctcgagccggtatcagatgatcgccac
ctgacggtagccactctggaggagaggcccttcgtcatcgtagagaacgtggaccccgac
acgggaacctgtgtacgcaacaccgtgccctgccgacgccagtccaaccgcaccgagagt
cttgtgggtcactcggagccctacaccaagctgtgctgtaaggggttctgcatagacatt
ctgaagaagctgtctcgcaccatcaagttctcctacgacctctacctggtcactaacggg
aaacatggaaagatgatcagcggcatctggaacggcatgatcggagaggtgttctacagg
aaagcagacatggccataggttctctcaccataaatgaggagcgttctgagatcatcgac
ttctccgtgccattcgtcgagaccggcatcagcgtcatggttgcccgtagcaatgggact
gtctccccctccgccttcctcgagccctatagcccagcggtgtgggtgatgatgtttgta
atgtgcctgaccgtggtagctgtgaccgtattcgtgttcgagtacttcagtcctgtcggc
tacaaccgcagcttggtcagcgctaaagcggcaggaggtcctaccttcaccatagggaag
tcagtgtggttgctttggggcatcgtgttcaataactcagtccccatcgagaaccctaaa
ggaaccaccagtaagatcatggtgctggtgtgggccttcttcgcggtcatcttcctggcc
tcctacaccgccaacctggctgccttcatgatccaggagcagtacatagacactgtgtct
ggactgtctgacaagaagttccagaagcctcaggaacactaccctccattccggtttggg
acggtccctaacggcagcacagagaggaacatcaggagtaactaccccgacatgcacgca
cacatggtcaaatacaaccagaaaggagtggaggatgccctcaacagccttaagacagcg
aagctggatgcttttatctatgatgctgcggtgttgaactacatggcagggaaggacgag
ggctgtaagcttgtgactattggctctgggaaggtgtttgctacaacgggctatggtatc
gccctgcagaaagactctcgatggaaacgaccaattgacctggccttattgcagttcctg
ggagatggtgacacccagcgcttggagacagtctggctgtcaggcatctgtcagaatgag
aagaacgaggtgatgagcagtaagctggacatagacaacatggccggggtcttctacatg
ctgctggtggccatggggctcagtctgctggtgttctcctgggaacatctactctactgg
aaacttcacaaggaactagacaaatctcccaggatggacttcctgctcgccatcagcagg
ggtatctacagttgcttcaacggggtggaggaaccagacctccctaacctggccaaccca
gacctgacagctaactatgcccaggctaacatgctcaagatgctacgcactgctaaggac
ctggttaactccgcccaagtcgagacctcactggaccacgcctccaagaccatagaacac
tggggacgccatggcggcagcctgccagtccacattccgcagcaaggcaccacggaaaca
gtcccgggagggttcgcttatgtcacagagaatacacacctgccccccgagcgccccctc
agcccacaatactgcacgctgggtgtagtgacatctgtgaaccagcagagggggctggcg
agacccacaccgctacgatacacgctcccggctcgtacttcttctctctacgacaggcca
cttcctgtttctagtctcatttgccctcaccttgacctggctgggggggaccgcctctct
tcttatcctcacccctccacaggtaggctctatgtggaaccccaacacctttcccacccc
cgctctcccttcatcccctatagtgagctccagctcccagacatctacctctcctctcac
ccaccctctgctgtctcccatcccccccacacagagccctccaagaggaagaggaggagc
aagagcctcctctcaggggagacaggaagaggaggaggacagaggaggcggcgcagggag
gagaagacggtgtgcctggctgaactccgggccaaccacctccaggaaaaccatgtctcg
ccccacatgcctgactccctgtacccaggagcggtgctctgtcctggggaagagggatgc
ggtggctcctggcctcttcctctggaggagctcgtcctagcaggcagacggcggcgccac
cgacggccatctttccttcgagccacctggggcagcgagcagattcgccagccggacgat
actccgcctacatccctcgatagccaatcacattctgctttaccagacttatttccccgc
gtcatggtcgaccaagaaactcccactaaactctacaaccccaccccgttccggaacaac
ctatgctatcctgccgcctcaccccgccaacatgcctatcttcatataaggcaggaccag
aggaaaggaaactcacgtaagaagctgcggcactcacactccacccacctccccacctac
agggaggccgtgctggggggccagggagggggaggtggggtaggcctgggggtggtccgg
agaaccaccagcctgctcagcagacagtacaatgactatctaacctcctaccctgggctg
cctctataccacagccccctcaacttccagacccattccccggcgtccagcaaccacccc
agccccggtacataccgtatccccagccctgtatgccagctcctggcctgtggaggtggc
tgtcgaagtcagagggggttgttgtaccaggacagtctgtatggagcctatggaggggcc
caggatccggacatagagccccagagaggagagggcttggtagggttgaggtctgaggac
agaccctgtgtgactcggccctggggaaaagtctctagtctggagtcagaggtctga
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