Oncorhynchus kisutch (coho salmon): 109889081
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Entry
109889081 CDS
T09179
Name
(RefSeq) vascular cell adhesion protein 1 isoform X1
KO
K06527
vascular cell adhesion molecule 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
109889081
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
oki04090
]
109889081
04091 Lectins [BR:
oki04091
]
109889081
CD molecules [BR:
oki04090
]
Proteins
109889081
Lectins [BR:
oki04091
]
I-type lectins (Siglecs)
109889081
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
C2-set_2
C1-set
V-set
ICAM_N
Ig_C17orf99
REJ
Pedibin
RPOC_hybrid
Motif
Other DBs
NCBI-GeneID:
109889081
NCBI-ProteinID:
XP_020335841
Ensembl:
ENSOKIG00005026454
LinkDB
All DBs
Position
LG4:complement(14757320..14778276)
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AA seq
816 aa
AA seq
DB search
MSLLWIVILPVTAFAFHVELKPKSAFFRVGDRQELRCSVKDCNEKVTMSWALLGDKPMFA
KIHTSGSESVAAFDPVMTVHDDILLCKVSCGALNKQQRVVVKVYSALRSTFDITAFPEAP
VISGYDHLLLGQSNTLTCEVIDAYPVEHLRLEWLRGDSMLQTDAESVVSTYRFTPTPEDK
ETSITCRASHDQDGVPDEEKTKETTVSLTVLYAPQNISISEPTAVRVGSSLTLSCHAEGN
PRPDTQWKAIGPDGQAVIVGQSEELVLTEMTLVDAGQYECVVSNTIGNITASVNIIVQAP
PTNTTITVSPASEVKEGESVTVSCLSDGAPVVRMVLRRLSEDQEVELQSSNGFSTSFTLS
SALLADSALYQCQAFNEHGSQKVSALLSVEEYPLEVAMDVGVTAEMGSNLVLSCRAWGCP
QPAFYWRSMLDMSVHSRAHTQDSLSQLYLGPLGLINEQAYTCEAKCGSVIKAKHAEVKVF
SFPSDPIIENTGPFLEHGVGIFFCLVANVYPASLLQIQWLDGEIELASEMGQYSSELQNV
TSTLSFSIGPEDQGRQITCRVSLQMDEVPQSGRERQAVTVLELHYAPRGTTITVSPGNEV
KEGESVAVSCLSDRVPVGRMVLRRLSEDQDIELQSSNGSSTSFTLSSALLADSALYRCEA
FNELGSQRASTYITVKAPPRNTTVLIYPSAEVQEGQNVTICCHSVSFPPPAVVLRKLDNG
TELYSPDGNFLLVNLTPNDTGLYQVNVTNDLGYETEIFSINVIEKHFSTSPDWNHVVIPA
VCVGIMVTTTGLILDYLRRARRKGFYELAKCNPGSA
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgttatggatagtgatactaccagtaacagcctttgcatttcatgtggagcta
aaaccaaagagtgcatttttcagagttggtgataggcaggagctgcgatgttcggtgaag
gattgtaacgaaaaggttactatgtcctgggctttgctgggggataagcccatgtttgct
aaaatacacacctcaggatcggaatccgtggcggcctttgaccctgtgatgacagtacat
gatgacatacttctctgcaaagtcagttgcggagcattgaacaaacaacagcgtgtggtt
gtcaaagtgtactctgccctacgatcgacatttgatattacagcatttccagaggcacct
gtcatatcaggctacgaccatcttctcttgggccagtccaacactctgacatgtgaggtg
atagatgcttatcccgtggagcacctgcgacttgagtggctgcgaggagacagcatgctc
cagacagacgcagagtccgttgtatctacctacaggttcacgccaaccccagaggacaaa
gagacaagcatcacatgcagagcctctcacgatcaggatggtgtgcctgatgaagagaag
accaaggaaaccaccgtatctctcacagtgctttatgcgccacagaatatatcaatatct
gagccgactgctgtgagagttggctccagtctcacgttgtcatgccatgctgaagggaac
cccagaccagatacacagtggaaggccattggtccagatggacaggctgttattgtgggg
cagagcgaggagcttgtccttacagagatgacactggtggatgctggtcaatatgagtgt
gtggtgagcaacaccattggaaacatcacagccagcgtgaacatcattgttcaagctccc
ccaaccaacaccaccatcacagtgagcccagccagtgaggtgaaggaaggggagagcgtg
acggtgtcctgcctgtcggacggagctccggtggtacgtatggtgctgaggagactctct
gaggaccaggaagtagaactccagtccagcaacggcttctccacctccttcaccctctcc
tctgccctgctagcagactctgctctctaccagtgccaggccttcaatgaacatggcagt
cagaaggtcagcgccttgctctctgttgaagagtatcccctggaggtggcgatggatgtg
ggggtgacggctgagatgggatccaacctggtgctctcctgccgggcttggggctgtccc
cagccagccttctactggaggagcatgctggacatgtcggtccatagccgtgcacacacc
caggactccctctcccagctctacctgggcccacttgggctgatcaacgagcaagcctac
acctgtgaggccaagtgtggctctgtcatcaaggccaagcacgctgaggtcaaggtcttc
tctttcccctcggaccctatcatcgagaacactggcccctttctggaacacggtgttggc
atctttttttgtttggtagccaacgtctacccagctagtctcctgcagatccagtggctt
gatggggaaatcgagctagcctccgagatgggacagtattccagtgaactccagaatgtg
acgtcaacgctttctttctcgattggaccggaggaccagggcagacagatcacctgcaga
gtcagtcttcagatggatgaagtccctcagagtgggagagagaggcaggcagtgactgta
ctggagctccactatgcccccagaggaaccaccatcacagtgagcccaggcaatgaggtg
aaggaaggggagagcgtggcggtgtcctgcctgtcggacagagttccggtgggacgtatg
gtgctgaggagactctctgaggaccaggatatagaactccagtccagcaatggctcctcc
acctccttcaccctctcctctgccctgctagcagactctgctctctaccggtgcgaggcc
ttcaatgagctcggcagccagcgagctagcacatacattacagtcaaagcacctcctagg
aacacaacagtcctgatatatccatctgctgaggtgcaggaaggccaaaatgtcaccatc
tgctgtcactctgtcagtttccccccacctgctgtggttttaaggaaactggataatggc
acagagctctactccccggatgggaacttcctgctggttaaccttacgcccaatgataca
ggcctataccaggtgaatgttaccaatgacctgggttatgagaccgagatcttcagcatt
aacgtcatagagaagcacttcagtacttcaccagactggaaccacgtagtcattcctgct
gtctgtgtgggtatcatggtgaccaccacgggcctaatcctggactacctgaggagagcc
aggaggaagggcttctatgagctggcaaagtgtaatcccgggtctgcatag
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