Oncorhynchus kisutch (coho salmon): 109890950
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Entry
109890950 CDS
T09179
Name
(RefSeq) transcription factor E3 isoform X1
KO
K09105
transcription factor E3
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
109890950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109890950
Transcription factors [BR:
oki03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
109890950
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MITF_TFEB_C_3_N
DUF3371
HLH
Motif
Other DBs
NCBI-GeneID:
109890950
NCBI-ProteinID:
XP_020338720
Ensembl:
ENSOKIG00005000908
LinkDB
All DBs
Position
LG5:complement(34692103..34705346)
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AA seq
448 aa
AA seq
DB search
MSSRVLLRQQLMREQAQEQERREAQQQNSVAQLRATDSTPAIYVTLPPMAARQPPAQVPV
EVLKVQSHLENPTKYHIQQSQRQQVKEYLSTTLGNKVAPQILGVSPLPLSSSAPEMTPTA
LSAPNSPMALLNLGSKKEEIDGVIDDIISLESSFNDDFMTLIDLGLQLPSTLPGNLLDVY
HSPGMAAPTLTVSNSCPADLTNIKREYSDTKALVKERQKKDNHNLIERRRRFNINDRITE
LGAIIPKSSDPEMRWNKGTILKASVDYIRKLQKEQQRAKEVEMRQKKLEHANHSLMLRIQ
ELEIQAQLHGLSSPMSHGLSSDPSLLQQQHLQQGDHKLGPSAGEACSQTFLSLGAAAMAQ
PVLTSSPPSSDSPVVVTISSPLDLGSVSFTELDDPSNAGLYLDVGLGDIIMDEGYTLSPE
RVDPLFFVSPGASKTSSRGSSFSMEEDL
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgcgtgtgctgcttcggcagcagctgatgcgggaacaagcccaggaacaagag
agacgggaggcccagcagcagaactctgtggcgcagctcagggcaactgactccacccct
gccatctatgtcactctgcccccaatggctgctcgccagccacccgcacaggtgcccgtg
gaggtgttgaaggtacagagccatctggagaacccaaccaagtatcacatccagcagtct
cagaggcagcaggtgaaggagtatctctccaccacccttggcaataaggtggcacctcaa
atcctaggtgtatctcccttgccactgtctagctctgcccctgagatgactcccacggcc
ctcagtgctccaaacagcccaatggctttactcaatctgggatccaagaaagaggagata
gatggcgtaattgacgacatcatcagccttgaatcaagtttcaatgatgacttcatgacg
ttaattgacttgggtctacagctgcctagtacactccctgggaacctcctggatgtatac
catagtcctggaatggcagcacctaccctcactgtcagcaactcctgccctgcggatctg
accaatattaaaagggaatactctgataccaaagcgctggtgaaagagagacagaagaag
gacaaccataacctcattgagaggaggcggaggtttaacatcaatgaccgcataacggag
cttggggccataatacccaagtcaagtgacccggagatgcgctggaataagggcaccatt
ctgaaggcctcggtggactacatcaggaagctgcagaaggagcagcagagagccaaggag
gtagagatgcgtcagaagaagctggaacatgctaaccacagcttgatgctgcgcatccag
gagttggagatacaggctcagctccatggcctctccagtccgatgtcccatggcctgagt
tcagacccctccctccttcagcagcagcaccttcagcagggagaccataaactggggccc
agcgctggagaggcctgctcccaaacctttctcagcctgggggcagcagccatggcacag
cctgtccttacctcctccccaccttcctctgactcccctgtggttgtgaccataagcagc
cccctggacctgggcagtgtaagcttcaccgagctggatgacccctccaatgctgggctg
tacctagacgtggggctgggggacatcatcatggacgaggggtacacactgtccccagag
agggtggacccactgtttttcgtgtcaccaggtgcctcaaagaccagcagtcgtgggagc
agcttcagtatggaggaggacttgtag
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