Oncorhynchus kisutch (coho salmon): 109892385
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Entry
109892385 CDS
T09179
Name
(RefSeq) adenomatous polyposis coli protein isoform X1
KO
K02085
adenomatosis polyposis coli protein
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04310
Wnt signaling pathway
oki04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
109892385
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
109892385
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oki01009
]
109892385
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oki03036
]
109892385
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oki04812
]
109892385
Protein phosphatases and associated proteins [BR:
oki01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109892385
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Centrosome formation proteins
Other centriole associated proteins
109892385
Cytoskeleton proteins [BR:
oki04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
EB / APC
109892385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm_APC_u3
APC_basic
APC_r
EB1_binding
APC_rep
APC_u5
APC_N_CC
SAMP
APC_u9
APC_u14
Arm
APC_15aa
Suppressor_APC
APC_u15
APC_u13
Sec7-like_HUS
DUF5798
Motif
Other DBs
NCBI-GeneID:
109892385
NCBI-ProteinID:
XP_020340472
Ensembl:
ENSOKIG00005003218
LinkDB
All DBs
Position
LG6:complement(15732750..15785093)
Genome browser
AA seq
2788 aa
AA seq
DB search
MAAASYDQLLKQVEALKMENSNLRQELEDNSNHLNKLETEASNMKEVLKHIQGSIEEDST
DSSGQIDLLERLKEISLDPNTYPGVKLRSQPSSMQGSGSGRSGDSSPMGSLGSLPKRGLS
NGGRDGAGYLEELEKEKSLLMAELEKEEKKKDQYYAQLQNLTKRIDSLPLTENQFSLQTD
MTRRQLEYEARQIRAAMEKQLGTCQDMEKRAQVRVTRIQQIEKDILKIQQHVQSPPAEPE
SKHDPAAQDEAGHASGDSGGPSAGCSQGSSSRLDQDSASEMSLGGGSYSVPRRLTSHLGT
KVEMVYSLLSMLGTHDKDDMSRTLLAMSSSQDSCIAMRQSGCLPLLIQLLHGNDKDSVLL
GNSRGSKEARARASAALHNIIHSQPDDKRGRREIRVLHLLEQIRVYCETCWEWQENHERG
VDQDKNPMPSPVEHQICPAVCVLMKLSFDEEHRHAMNELGGLQAIGELLQVDCEIYGLTS
DHYSVTLRRYAGMALTNLTFGDVANKATLCSMKGCMRAMVAQLKSESEDLQQVIASVLRN
LSWRADVNSKKTLREVGSVRALMECALEVQKESTLKSVLSALWNLSAHCTENKADICAVE
GALAFLVSTLMYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQILRENSCLQTLLQHLK
SHSLTIVSNACGTLWNLSARNAKDQEALWEMGAVSMLKNLIHSKHKMIAMGSAAALRNLM
ANRPAKYKDANIMSPGSSLPSLHVRKQKALIEELDSQHLSETFDNIDNLSPKASHRGKPS
RHKQNVYSDYDGVSRSDGFSPNSVPVRSPYVNTPVLSSPSPRDNPRGNIDSVRAERDRGQ
DRDRQRGAPSGFHPDHDSKRMQMPATTAAQIAMVMEEVNSIHLLTGLDDRSPETPNQDPH
CTTAAHGHSNVYPYTKTDHSGRPCPMPKLEYKASNDSLNSVNSTDGYGKRGQMKPSVDSY
SEDDEGKCCVYRKYPADLAHKIHNANHMEDDDGEVDTPINYSLKYSDEQLNSGRQSPSQN
ERWARPKHMEEMKQTDQRSVRSQSPGYPMYTDGNSEGEEKLKYKPRFVQSEMQQGFRSRN
TNQHQQDQSNTGPTQGMNKKMNNQTMCQSVDDYGDDKPTNYSERYSEEEQQDDQPTNYSM
KYNKGPHTEQPIDYSLKYSDTSSQKSMFSHSKSSSTQSSVKDHLSQDGSTSSVTSKKNVG
RQMQLHPSSAQTRSGPTRPGQKNTTCKPPTVNQETLQTYCVEDTPICFSRGSSLSSLSSD
EDEMEGCKRNVNAASNYPTLPISEKESTGSHAQEQGTTEGQSVQYVRIKPPRTSQVHGDG
SRHHKAVEFSSGAKSPSKSGAQTPKSPPEHYVQETPLMFSRCTSVSSLDSFESNSIASSI
QSELCSGMPSGIISPSDLPDSPGQTMPPSRSKTPPPPQHPPPMKHKKVPPPPPPRADLAP
RHAAVHSAVQRVQVLPDNDTLLHFATESTPDGFSCASSLSALSLDEPYIQKDNELKIMSP
VHEDNQGNEAEHEHDDTTESPSQEMHSPGEVEKDILDDSDDDDIEILEACINSAMPTKSS
RKPKKQSPSNTTSRIPPPTAHKPSQLPVYKLLPSQTRGQQKTVGFTHGEDMPRIYCIEGT
PINFSTATSLSDLTIDSPPNELANTERCAPPCAEVFSSQIRDTIPEGESTDEKDGGVTSS
FTQAAAVENEGDDILAECISSAMPKGKIHKPFRVQKMNDQLQHPSSASPVSLVKQEVEKK
KPTSPVKPMPQSSEYRARMIKKPQPPFNFVSYPDKNKETKTLEPKMASRNFPDKPPNADE
RPRPGFAFDSPQNYTPIEGTPYCFSRNDSLSSLDFEDDEPDLSKEKAQLRKDKDQRKVST
KNRGESSPRTNRANVPLTAPTPMQQKQAVFPQPSKENVGPVPDEKQKFSIEDTPMCFSRN
SSLSSLSDIDQENNNKDLQPKEVEDVTQVEATSKPQASGYAPKAFHVEDTPVCFSRNSSL
SSLSIDSEDDLLQECISSAMPKKKKQTARNKGGNDQGVATEEKSMDRILAEEPDITLDLT
DTHSPVSEQALSPDSESFDWKAIQEGANSIVSSLHQAAASLSRQGSSDSDSILSLKSGIS
LGSPFHLPLNSEDNKSASDKGRPRILKPGEKSTLEAQKKEKEEEAAKALKGGKKVYKSLI
TGKPRASAETPASLQQRPTAPSVPMISRGRTMIQVPGVRSSSPSTSPVQKKPPPRGPASV
SKTPPTQGQNSSNSPRSIKPPAKSDPSPAKDQPGSQSGSSKASSRSGSRDSTPSRPAQQS
LTTRPMQSPGRSSVSPGRNGLGASNKLSQVPRTASPSTLSTKSSGSGRMAYTSPGRPMGQ
QTPPKQTGLTRSTSGIPRSESASKSLNQCAVAGPSKKQDLSRMSSTKSSGSESDRSEKPA
LVRQSTFIKETPSPTLKRKLEESASFESLSPSSTSQSQTPVSSPSLPDMSLTCQGSNWKK
SPQNPNSSENGDEKPQRGGKHDISRSHSESPSRLPNLNRKGTWKRENSKHSSSLPRVGTW
KRTGSSSSILSASSESSEKGKSEDERQPLSPAQRSPHGKDGNPLKGTWRKMKDSEMSQSE
GRDSSSIESMDTMAMGHQMSPAVSKTEDVWVRIEDCPINNPRSGKSPTANIPPVIDSVIL
KMPSVDLLTSETHPKHSSNESVNALRLGSETNLNLFRSSESIDKKGPDIKPAQSNPSIVP
EAHELSLAERTPFSSSNSSKHSSPSGAVAARVSPFNYTPSSRKSSADSATLPRPSQIPTP
VSVTNSAKKRETKGESAGESGSYIVTSV
NT seq
8367 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagcgtcttatgatcagctgctgaagcaagtggaggcactgaagatggagaac
tccaaccttcggcaagagcttgaggacaactccaaccacttgaacaaactggagactgaa
gcctcaaatatgaaggaggtgctgaaacacatacagggaagcattgaagaagactctacc
gattcatccggacaaatcgatctcctagaaagactgaaagaaattagcctggatcctaac
acttacccaggggtgaagctgagatctcagccgtcttccatgcagggttcaggctctggg
cgttcaggggacagcagccccatgggttccttgggctccctccccaagagagggctgtcc
aatgggggcagagacggcgctggctacctggaggagcttgagaaggagaagtccttattg
atggcggagctggagaaagaggagaagaagaaggaccagtattacgcacagctgcagaac
ctcaccaagaggatcgacagcctaccactgactgagaatcagttctccctgcagacggat
atgacccgtaggcaactggagtacgaggcgaggcagatcagagctgccatggagaaacag
ctgggaacctgccaggatatggagaagagggcacaggtgagggtgactcgtattcagcag
atagagaaggacatactgaagatccaacagcatgtccagtctccacctgcagaaccagag
agcaagcatgacccggctgcccaggatgaggcaggccatgcttcaggggacagtggtggg
cctagcgctgggtgttctcagggttccagctctcgcctggatcaggactctgccagtgaa
atgagtttgggtgggggtagttactctgtgccccgcagactgaccagtcacttgggcacc
aaggtggagatggtttactcccttctttccatgctggggacccatgataaagatgacatg
tctcgcactctgctagccatgtccagctcccaggacagctgcatcgccatgcgccagtca
ggctgtcttcccttactcatccaactcctccatggcaacgacaaggactcagtgctgctg
gggaactcccgaggcagcaaggaggcccgggcgagagccagcgccgccctccataacatt
atccactcccagcctgacgataagagagggcgcagagagatcagagtgctgcacctcctg
gaacagatcagggtttactgcgagacctgctgggagtggcaggagaaccatgagagggga
gtggaccaggataaaaaccccatgccctctcccgtggagcatcagatctgcccagcggtg
tgtgttctaatgaagctgtcctttgatgaagagcacaggcacgctatgaatgagctcggg
gggctgcaggctataggggagctcctccaagtggactgtgaaatatacggcctcaccagt
gaccactacagcgtcactctgaggagatacgctggcatggcccttaccaacctcaccttc
ggggacgtggccaataaggccactctatgttccatgaagggatgcatgagggccatggtg
gctcagctgaagtctgagagtgaggatctacagcaggtgattgccagtgtgttgaggaac
ctgtcctggcgtgcggatgtgaacagtaagaagaccctccgtgaggtgggcagtgtcagg
gctctgatggaatgtgccttggaggtacagaaggagtctactctgaagagtgtcctcagt
gccctgtggaacctgtcagctcactgcactgaaaacaaagctgatatctgtgctgtagag
ggggctttggccttcctggttagcactttgatgtaccgaagccaaactaacaccctcgcc
atcattgaaagtggaggaggcatcttgcgcaatgtgtctagtctcattgctacaaatgaa
gatcatagacaaatcctgagagagaacagctgtcttcagacactcctgcagcacctgaag
tctcacagcctgactattgtgagcaacgcgtgtggcacgctgtggaacctctcggcccgc
aatgcaaaggaccaggaggccttgtgggaaatgggtgctgtgagcatgctgaagaacctc
atccactccaagcacaagatgatcgctatgggcagtgccgcagcactgaggaacctcatg
gccaacaggcccgccaaatacaaggatgccaacatcatgtcacctggatctagcctgccc
tctcttcacgtcaggaaacagaaagccctgatcgaggaactggactctcagcacctctcg
gagacgttcgacaatattgacaatttaagccccaaggcgtcccacaggggtaaaccaagc
aggcacaagcagaatgtctacagtgattacgatggtgtctctagatcagacgggtttagc
cccaacagtgtgcctgtgcgctccccttacgtgaacacaccagttctgtcgagcccgtca
cccagagacaacccaagggggaacatagacagtgttagggccgagagggatcggggccag
gacagagacagacagaggggtgcacccagtggtttccacccagatcatgactctaagaga
atgcaaatgcccgccacaacagctgctcagattgccatggtgatggaggaagtgaacagc
attcacttactgactggcctggatgaccggtcaccagagaccccaaatcaagaccctcac
tgtacaactgcagcacatggtcattcaaatgtatatccctacactaaaaccgatcactcg
ggcagaccatgtccaatgcccaagttggaatacaaggcatccaacgacagtctcaacagc
gtaaacagcactgacggctatggcaaaagaggacagatgaagccatctgtggactcatac
tctgaggatgatgaggggaagtgttgcgtctatagaaaatatcctgcagaccttgctcat
aagatccacaatgccaaccacatggaagatgatgacggagaagttgacacacctatcaac
tacagcctaaagtattctgacgagcagctgaactctggtcggcaaagtccaagccaaaat
gagagatgggcgaggcctaagcacatggaggagatgaaacagacagatcagaggtctgtg
cgatctcaaagcccaggctaccccatgtacacggatggcaacagtgagggggaggagaaa
ttgaagtacaagcccaggtttgtgcaatcagaaatgcaacaaggattcagatcaaggaac
accaaccaacaccaacaagatcaaagcaatactggtcccactcaaggaatgaacaaaaag
atgaacaaccagactatgtgccagtctgtggatgattacggtgatgacaaaccaaccaat
tacagtgagcgatactcagaggaagaacaacaggatgaccagccgaccaattacagtatg
aaatacaacaaggggcctcatacggaacaaccaattgattacagtctgaagtactctgac
acctcctcccaaaaatccatgtttagtcattcaaagtcatcctccactcagagctcagtg
aaagaccatctaagccaagatggttcaacatcatccgtgacatccaaaaagaatgtaggg
agacaaatgcagctacatccatcctcggctcaaacgaggtcagggccaactcgaccaggc
cagaagaacacaacatgcaaacctcctaccgtcaatcaagagaccctacagacgtactgt
gttgaggacacacccatctgtttctcaaggggtagctctctgtcatccttgtcctcagat
gaggacgaaatggaaggctgcaagaggaatgtgaatgctgctagcaactacccaactctt
cccatctctgagaaagagtccactggcagtcacgcccaagaacaaggcacaaccgagggc
cagtctgtgcagtatgtccgaataaagcctccaaggactagtcaagttcatggagacgga
tccagacatcacaaagccgttgagttttcatcaggagctaaatcaccatctaaaagtggt
gcccagactcccaaaagccccccagaacactatgtgcaggagacgcccctcatgttcagc
agatgcacatctgtaagctctctggacagctttgagagcaactccattgctagctctata
cagagtgaattgtgcagcgggatgcccagtggaatcatcagcccaagtgatctgcccgac
agccctggtcagaccatgcctccgagccgaagcaaaacgccaccaccccctcaacatcca
ccaccaatgaaacacaaaaaggtgccgccgccaccgccgccgagggcggatttggctcca
aggcatgctgctgtacactctgctgtccagagagtccaggtgcttccggataacgacacc
ctcctacactttgcgacagagagtaccccagatggattctcttgtgcatccagcctcagt
gctttaagcttagatgaaccttacattcaaaaagataatgagctcaagattatgtctcct
gttcacgaagacaaccagggaaatgaggctgagcatgagcatgatgacactacagaatcc
ccaagccaagagatgcattcacctggtgaggtagaaaaagacattttggatgattcagat
gatgacgatatagaaatactggaggcttgcataaactcagccatgccaacaaagtcatcg
agaaaacccaaaaagcaatcaccttccaacactacttctagaataccaccacctactgcc
cataaaccaagccaacttcctgtgtacaagttactcccttcacaaacccgaggacaacag
aagactgttggcttcacccatggagaggacatgcctaggatttactgcatagagggaacc
cctataaatttttcaacagccacatctctcagcgacctcaccattgattcacccccaaat
gagctggccaacactgaacggtgtgctcctccttgtgcagaagtattctccagtcaaata
agggatactattccagaaggggaaagtacagatgaaaaagatggaggtgttacttcatcc
ttcacacaagctgccgctgtagaaaatgaaggggatgacatcttagcagagtgtatcagt
tcagccatgccaaaaggtaaaatccataagccctttagagtacagaaaatgaatgatcaa
ctacagcacccttcatcagcttctcctgttagtctagtcaaacaagaggttgaaaagaag
aagcccacatcccctgttaaaccaatgccacagagtagtgagtacagagctaggatgatt
aaaaaaccccagccacctttcaactttgtttcataccctgataaaaacaaagaaaccaaa
acgcttgagccaaaaatggcctccagaaatttcccagataaaccaccaaatgcagatgag
cggccacggccaggatttgcttttgactcgccacagaattacacaccaatagagggtaca
ccctattgcttttcacgcaatgactccctgagttccttggatttcgaggatgatgaacct
gatctctcaaaggaaaaggcacaacttagaaaagacaaagaccagagaaaagtgtcaacg
aaaaaccgtggagagtcatcccctagaacaaacagggcaaatgtaccactgactgctcca
acacctatgcagcagaagcaggcagtctttccacaaccatccaaagaaaacgtggggcca
gtgccagatgagaagcagaagttttccattgaggacacaccaatgtgtttctctagaaac
tcctctctcagctcgttaagtgacattgaccaagagaacaacaacaaagacctccagcca
aaagaagtggaggatgtaactcaggtagaagctacttctaaacctcaagcctctggttac
gcaccaaaagcctttcatgtagaagacacccctgtgtgtttctcaagaaacagttcactc
agctcactaagcattgattcagaagatgaccttctacaagagtgcatcagttcagccatg
ccaaaaaaaaagaaacaaacagccagaaataagggggggaatgaccaaggagttgccact
gaggagaaaagtatggatagaattttagctgaggagcctgatatcacattggatctcact
gatacacatagtccagtttctgaacaagccttatctccagactctgaatcttttgattgg
aaggccatccaagagggtgccaattccatcgtcagcagtttgcaccaggcagctgctagc
ctctctagacaaggctcatctgactctgactcaatcctctccctcaaatctggaatatcc
cttggctccccttttcacttgcccttaaattcagaggataataaatctgcatctgacaaa
ggacgcccacggatattaaagcctggtgaaaagagcactttagaagcccaaaaaaaagaa
aaggaagaggaggcagcaaaagctcttaaagggggcaagaaagtctacaaaagtctcata
acaggaaaaccacgtgccagcgctgagaccccagcctcattacagcagaggccgactgcc
cctagtgttcccatgatttctcgtgggaggacaatgatccaggtccctggcgttagaagc
agttctccaagcacaagcccagtccaaaagaagcctccaccccgtggtccagcctctgtc
tcaaaaactcctcccactcaagggcagaattccagtaactcacccagaagcatcaaacca
cctgctaaatctgatcctagtccagccaaggatcagcctggatctcaatcgggatcaagt
aaagcttcatcacgatctggatccagagactccacaccatccagaccagctcagcagtcc
ttgaccaccagacccatgcagtcacccggtcgctcctctgtgtcacctggaagaaatggt
ctcggcgcttcaaacaaattatcccaagtgcctcgcactgcttctccaagcacattgtca
actaagtcttctggttctggcaggatggcctacacctcccctgggagaccgatgggtcag
caaactccacccaagcagactggcttgacgagaagcactagtggaatccctaggagtgaa
tctgcctcaaagagtctgaaccagtgtgcagttgctggcccttctaagaagcaggatttg
tccaggatgtcgtccacaaagtctagtggaagtgagtcagaccggtcggagaaacctgcc
ctagttcgccagtcaacgttcatcaaagagacccctagtccaacactgaagaggaaattg
gaagagtctgcttcttttgagtctctgtccccctcctctaccagccagtctcaaacgcct
gtgtcgagtccgtctttgccagatatgtcgttaacttgtcaaggaagcaactggaaaaag
tctcctcagaatccaaattcctccgaaaatggggatgagaagcctcaaagaggagggaag
catgacatctccaggtcccattcagaaagcccctctaggctccctaatcttaacaggaaa
ggtacatggaagagggagaacagcaaacactcctcctctctcccaagggttggcacctgg
aagagaaccggcagctcatcttccatcctttctgcctcctctgagtcaagtgaaaagggc
aagagtgaggatgaacgacagccactgagtccagcccaaaggtccccacacggcaaagat
ggaaaccctttaaaaggaacatggaggaagatgaaggatagtgaaatgtctcagtcagaa
ggccgtgattcttcctccatagagtccatggacaccatggccatggggcaccaaatgagc
cctgcagtttccaagactgaggatgtgtgggtgaggattgaggactgtcccattaacaac
ccgaggtctggaaaatcaccaacagcaaacatccctcctgtaattgacagtgttatactc
aaaatgccctctgttgatctcttgacaagtgaaacccatccaaaacattcctcaaatgaa
agtgtaaatgctcttaggctaggttcagagactaatttaaacttgtttaggagcagtgag
agtattgataagaaagggccagacatcaagcctgctcagagtaacccaagcattgtccca
gaggcccatgaactgtctcttgctgaacgcaccccttttagctcctccaattctagcaaa
cacagctcaccgagtggggctgtggcggctagggtcagccctttcaactacacccctagt
tccaggaagagcagtgctgacagtgccacactaccacgaccctcacagatacccacgcct
gtcagtgtaactaacagtgcaaaaaagagagagactaaaggagaaagtgctggtgaaagt
gggtcctacattgtaacctcagtttaa
DBGET
integrated database retrieval system
