Oncorhynchus kisutch (coho salmon): 109897359
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Entry
109897359 CDS
T09179
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2B-like
KO
K05210
glutamate receptor ionotropic, NMDA 2B
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04020
Calcium signaling pathway
oki04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
109897359
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
109897359
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oki04040
]
109897359
Ion channels [BR:
oki04040
]
Ligand-gated channels
Glutamate (ionotropic)
109897359
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
SBP_bac_3
SUIM_assoc
Motif
Other DBs
NCBI-GeneID:
109897359
NCBI-ProteinID:
XP_031690190
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All DBs
Position
LG10:59917502..59931266
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AA seq
1048 aa
AA seq
DB search
MGAVSSTTFYNSMWFVYGSFVQQGGEVPYTTLATRMMMGVWWLFALIVISSYTANLAAFM
IQEEFVDQVTGLSDNKFQNPYAYSPPFRFGTVPNGSTERNIRKNYPDMHEYLVKYHQGGV
QDALVSLKAGKLDAFIYDAAVLNYAAGRDDGCKLVTIGSGYIFATTGYGIALQKGSHWKR
QVDLAILAIIGDGEMEELEAIWLTGICHNEKNEVMSSQLDVDNMAGVFYMLGAAMALSLI
TFIAEHAFYWQLRFCFMGYCTGKPGFVFSISRGIYSCIHGVQIEEKSSSALDSPSVTMNN
TQSNILRLLRTAKNMASLSGVNGSPHSALDFIRRESSVYDISEHRRSLAGHSDCKPPYLP
EDNMFSDYINEVERTFGNLHLKDSNLYQDHYLHHHGGSALGLSGPPLNRPHSLGSNSSLE
GGMFDCDSLGGGVAPIFTTQPRSALTHRNMSKFDLIASQNPPSGPGFKSGLSDLYGKFSF
KGGASSSGYIPGHDRYCGGGGREDDGNIRSDVSDISTHTVTYGNLEGNAKKRKQYRDSLK
KRPASAKSRRELDEIELGYRRKPYHTGYHHYHGHRSSSPPLLASERKRGGGGNAGSTSYL
FRDKESVRDFYLDQFRPKDGVPQWEHVDLTDGPGGGGGGGGGNCTSLVSVDDFLKQNKPK
KSESKSGGGTSGAGLAGGDWECRNCRASGGGVKQMSMHGSGAGERGGGYGGGVSCGSSGG
GGNSRPSSATCMRCEGCKKTGNLYDISEDNNHLLEQMGGGKGGGMGAVGLSGGAQPQSQA
QRRKSAGFGKPLRRQHSCDTFVDLQKEEAVGVRGVMGDLGGGGGGMGGAGMSGMLPPPRS
VSLKEKERYMEGVSPFAHIFERHGGSEREKERDRDPLFYGGEMAKEAGSPFGLFRGGEGL
HRRSVGERDMRDRERAMMEGGGGGTYSLSKSLYPDRVNQNPFIPTFGDDQCLLHGAKQYY
MKKQQQQQQQMPPKNSRSDFRGSVGLTSFLPATATAGVMSTVAPRFPMDLCLGGNLHGST
LGVGPIQRPFNGSNGHVYEKLSSIESDV
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgggtgctgtctcctccaccaccttctacaattccatgtggttcgtctatggatccttc
gtccagcagggtggtgaagttccgtataccaccctggccacgaggatgatgatgggggta
tggtggctctttgctctaatcgtcatctcctcctacacagccaacctggctgccttcatg
atccaggaggagtttgtagaccaggtcacgggactgtctgacaacaagttccagaacccg
tatgcatactcccctccattccgttttgggacggttcctaacggttcaacagagaggaac
atcaggaagaattaccccgacatgcacgagtacctggtgaaatatcaccaaggaggagta
caggatgcactggtcagcctcaaagcaggtaaactggatgccttcatctatgatgctgct
gtgttgaactacgctgctggcagagacgatggctgtaagctggtcaccatcggcagcggg
tacatcttcgccaccaccggctacggcatcgctctgcagaaagggtcgcactggaaacga
caggtggacctggctatactggctatcataggagatggtgagatggaggagttggaggct
atctggctaacggggatctgtcacaatgagaagaacgaggtgatgagcagccagctggac
gtggacaacatggccggcgtcttctacatgctgggggcggccatggctctgtcgctcatc
accttcatcgccgagcatgccttctactggcaactgcgcttctgcttcatgggctactgc
acgggcaagccaggcttcgtcttctccatcagcaggggcatctacagctgcatccacggg
gttcagatcgaggagaagagcagctcagctctcgactctccatcggtcaccatgaacaac
acccaatccaacatcctgcgtctgctccgaaccgctaagaacatggcctccctgtccggg
gttaacggctcgcctcacagcgccctggacttcatccgtcgtgagtcatctgtctacgac
atctccgagcaccgccgcagcctggcaggtcactcggactgcaagcctccatacttgccg
gaggataacatgttcagcgactacatcaacgaggtggagaggacgttcgggaacctccac
ctgaaggacagcaacctgtaccaggaccactacctgcaccaccacggaggctctgccctg
gggctcagcggcccgccacttaacagaccccacagcctgggcagcaacagctctctggaa
gggggcatgtttgactgtgacagtttaggtggaggagtggcacccatcttcaccacccag
ccacgctctgccctgacccacaggaacatgagtaagtttgacctgattgccagtcagaac
ccaccctccgggccgggcttcaaatcgggactgtcagacctgtacggaaagttctccttc
aagggaggggcctctagctcaggttacatccccgggcacgacaggtactgtgggggaggg
ggcagagaggatgacggaaacatccgttcagatgtttcagacatctccactcacacggtc
acctacgggaacctggagggcaacgctaaaaagcgtaagcagtatcgcgacagcctgaaa
aagaggcccgcctcggccaagtcgagacgagagctggatgagattgagctgggctaccgg
agaaagccctaccacacaggctaccaccactaccatggccaccgctcctcctccccgccc
ctactggcctccgaacgcaaaagaggaggaggcggcaatgcagggagcacatcctacctg
ttccgtgacaaagagagtgtgagggatttctatttggaccagttccgccccaaagatggt
gtcccccaatgggaacatgtggatctgacagacggtcctggaggggggggtggaggcggc
ggggggaactgtacaagtttggtgtcagtggacgacttcctgaaacaaaataaacccaag
aaatcagagtctaagagtgggggcggcacatcaggggcggggttggcaggaggagactgg
gagtgtcgaaactgccgtgccagcggaggaggggtcaagcagatgtcaatgcatggcagc
ggggcgggggagaggggaggcgggtacggtggaggggttagttgtggatcctcggggggt
ggagggaacagccgtcccagctctgccacctgcatgcgctgcgagggctgcaaaaagaca
ggcaacctgtacgacatcagtgaggacaacaaccacctcttggaacagatggggggtggg
aaaggcggaggcatgggggctgtggggttaagtggaggtgcccagcctcaatctcaagcc
cagcgtaggaaatctgccggctttggaaagcccctccgacggcaacactcgtgcgacacc
ttcgtagaccttcagaaagaggaggcagtcggagtcaggggggtcatgggggatctagga
gggggcggtgggggcatggggggtgcaggaatgagcgggatgttgcctccacccagaagt
gttagtttaaaagagaaggagcgctatatggagggtgttagccccttcgcccacatattt
gagaggcatggaggctcagagagggagaaggagcgagacagagaccctctgttctacggt
ggtgagatggccaaagaagcagggtcgccgtttggcttgttccgaggtggtgagggcctt
caccgccgctcagtgggggaaagggacatgagggaccgagaaagagccatgatggagggc
ggtggaggaggaacctactccttatccaaatctctctacccggatagggtcaaccaaaac
ccctttattccaacctttggtgacgaccagtgtctcttgcatggcgccaaacaatactac
atgaaaaagcaacaacagcagcagcagcagatgcccccaaaaaacagccgaagtgacttc
cggggctccgtgggtttgacatctttcttgccagcgactgccactgctggggtcatgtcc
accgtggcccccaggttccctatggacctgtgtctgggagggaacctccacggctccacg
ctgggtgtggggccaatacagcgcccgttcaatggcagcaacgggcacgtgtacgagaaa
ctctccagcatagagtcagacgtgtga
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