Oncorhynchus kisutch (coho salmon): 109898684
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Entry
109898684 CDS
T09179
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C-like isoform X1
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04020
Calcium signaling pathway
oki04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
109898684
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
109898684
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oki04040
]
109898684
Ion channels [BR:
oki04040
]
Ligand-gated channels
Glutamate (ionotropic)
109898684
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
NMDAR2_C
Motif
Other DBs
NCBI-GeneID:
109898684
NCBI-ProteinID:
XP_031690519
Ensembl:
ENSOKIG00005019193
LinkDB
All DBs
Position
LG10:complement(63395563..63475099)
Genome browser
AA seq
1437 aa
AA seq
DB search
MGVRLGHLSDSPWWWPLLLLLLLCTAPWCQGRPFATPLPAVNVAVVFSGSAYQQEIKGRL
SRENFMDLPLEVNPITVLVNNTNPRALLTRICDTLAANRVHGVVFEDNIGSEAVAQILDF
IALQTAVPIVGISGGSAMVLPHKGDGSTFLQLGSSIEQQINGMFKVMEEYNWDSFVVITS
LYPGYEVYVDYVKTFTDTSYFMWELQDVLTFDMSADGMNDIRARRLLQQIDAQVLLVYCS
HEEAQYLFRMAGEAGLLGPGYIWILPSLAVGNPDMPPPNSFPVGLISIITDRWRMSLRKR
VRDGVAIVVKGVQSFHKQRGFIPEGHNDCHSPVRASSNDTLFRHMLNVTWEHNDFSFNPE
GYLINPAMVIITLDRERQWDKVGNYEMGILQMRYPVWPRYGTYLEPVSDNRHLTVATLEE
RPFVIVEAVDPMTGTCVSNTVPCRRQSNKTETIVGHTEPYTKLCCKGFCIDILKKLSRTT
KFSYDLYLVTNGKHGKLVRGSWNGMIGEVVYKRADMAIGSLTINEERSEIIDFSVPFVET
GISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFIFEYCSPVGYNRSLVSA
KGECQLRPPFPLPLPSRISKGRKSRKNPGGPTFTIGKSVWLLWGIVFNNSVPIENPKGTT
SKVMVLVWAFFAVIFLASYTANLAAFMIQEQYTDTVSGLSDKKFQKPQEQYPPFRFGTVP
NGSTERNIRSNYPEMHAHMVKYNQKGVEDALNSLKSGKLDAFIYDAAVLNYMAGKDEGCK
LVTIGSGKVFATTGYGIALQKESRWKRPIDLALLQFLADGDTQKLQTVWLTGICRNEKKE
VMSSKLDIDNMAGVFYMLLVAMGLSLLVFSWEHLLYWKLRHSVRKSERLDFLLAISRGIY
SCFNGVEDSDRNGNLQNPDVTANYTQANMLKMLQTAKDIVTSTRVENSLDNATKTIENWS
RRGADNVRVGLPPRVATTIDMGHSRLPYISSITDNHSPYPQRALASTFPIHYSDSATQPL
LDKSRVVTRPTPLRYTLPARGSHHFYERTLPISSLSSPHIAMRDPAPPSTSSHNPHPSSR
LYVESQPRHPTSPFVPYREFQVPDIYVEHHKGPLGRKFSYPPDHMGRKKRSHSYVFSEAQ
DTRGRNDYDEPTSCLAELRANHLLNNHAPSASTMACMGGHYPSGSASCNSCMKPYLEPEM
ENVPLLGKDKVNRRASFLKATWSSDRIRQLGEKPSTSTMPDLFPRVVVANPKPHKLYGSQ
GNNLCYPLAAEPAYLDPAHMRSYPYKQQKLKCSQSTRLPSYREAILQNAAALRRSSSTVV
HRHYSTYLNSYTDLPVYVGPLPQGPGPFYDKDMCHLFPCASHCPNNNALVPRMGDRQVVY
QNNMFGGYEGAVGRSREEPPLPGSGSRDRREVLVARRVNSPYVPKTWGRVSSLESEV
NT seq
4314 nt
NT seq
+upstream
nt +downstream
nt
atgggcgttcgtctaggccacttgagcgactccccgtggtggtggccgctgctgctgctg
ttgctgctctgcactgccccctggtgccaaggtcggcctttcgcaacgcccttgccagca
gtcaacgtggcggtggtgttcagtggctcggcctaccagcaggagatcaaggggcgtctc
agcagggagaacttcatggacctgcccttggaggtgaatcccatcacagtgctggtaaac
aacaccaaccctcgggccctgctcacacgcatctgtgacacactggcggccaaccgtgta
catggtgtggtgtttgaagacaacatcggctcggaagccgtggcacagatcctggacttc
attgccctgcagacggccgtgccaatcgtgggcatcagcgggggctccgccatggtcctg
ccacacaagggcgacggctccacgttcctccagctgggctcctccattgagcagcagata
aacggcatgttcaaggtgatggaggagtacaactgggacagcttcgtggtcatcaccagt
ctgtacccgggctacgaggtctatgtggactatgtcaagaccttcactgacaccagctac
ttcatgtgggaactgcaggacgtgctgaccttcgacatgtctgccgacggcatgaacgac
atccgggcacggcgcctgctgcagcagatcgacgcccaggtactgctggtatactgctcc
cacgaggaggcccagtacctgttcagaatggccggagaggccggcctgctggggcctggc
tacatctggatcctccctagccttgccgtggggaacccagacatgcccccaccaaacagc
ttccctgtgggcctcatcagcatcatcaccgaccgctggcggatgagcttgaggaagagg
gtgcgggatggggtggccatcgtggtcaaaggggtgcagagcttccacaaacagaggggc
ttcatccccgagggccacaacgactgccacagccctgttagggcatcttctaatgataca
ctgttcaggcacatgttaaacgtaacatgggaacacaacgacttctcgttcaaccctgaa
gggtacctgatcaacccggctatggtcatcatcaccttagatcgagagagacagtgggat
aaggtggggaactatgagatggggatcctgcagatgagatacccggtgtggcctcgctac
ggcacctatctggagcccgtatcagataacagacacttgactgtggccacactggaggaa
cgtccctttgtcatagtggaggctgtcgaccccatgactgggacctgtgtcagcaacact
gtgccctgccgccgccagtccaacaagacagagactattgtaggtcatactgagccctac
accaaactgtgctgtaagggtttctgcatagacatcctgaagaagctgtcccgcaccacc
aaattctcctacgacctctacctggtcaccaacgggaagcacggcaagctggtcagaggc
agttggaacggcatgatcggagaggtggtatacaagcgggcggacatggccattggctcg
ctgaccataaacgaagagcgctcagaaattatcgacttctccgtgccgtttgtggagacg
gggatcagtgtgatggtcgccaggagcaatgggaccgtctcaccctctgcctttcttgag
ccctacagtccggcggtgtgggtgatgatgtttgtgatgtgcttaacggtggtagctgtc
acagtgtttatctttgagtactgcagccctgtggggtacaaccggagtctggtgagcgcc
aagggtgagtgtcagctccgaccacctttccctctacctctaccctcccgtatcagcaaa
ggtagaaagtcacggaaaaatcccggaggccccaccttcactattgggaagtctgtgtgg
ctgctgtggggcatcgtcttcaacaactctgttccaattgagaaccccaagggcaccacc
agcaaggtcatggtcctggtatgggccttcttcgctgtcatcttcctggcctcctacact
gccaacctggcagccttcatgatccaggagcaatacactgacacagtctctggactgagt
gacaaaaagttccagaagccacaggagcagtatccaccgtttcgttttggtacggtccca
aatggaagcacagagaggaacatccggagcaactaccctgagatgcatgcccacatggtc
aaatacaaccagaagggtgtggaggacgccctcaacagcctcaaatcagggaaactggat
gccttcatctatgacgctgctgtgctgaactacatggcaggtaaagacgagggctgtaag
ctggtgaccatcggcagtgggaaggtctttgccaccactggctacggcatcgccttgcag
aaggagtcccgatggaaacgtcctatagacctggccctgctccagttcctagcggatggt
gacacacagaagctgcagacggtgtggctcacagggatctgtcgtaacgagaagaaggag
gtgatgagcagtaagctggacatagataacatggcgggcgtcttctacatgctgctggtg
gccatgggactcagtctcctggtgttcagctgggaacatctgctctactggaagctgaga
cactctgtacgcaagtctgaacgcctcgacttcctgctcgccatcagcaggggaatctac
agctgcttcaacggtgtggaggactctgaccgcaacggaaacctgcagaaccctgacgtc
accgccaactacacccaggccaacatgctgaagatgctgcagacagccaaggacatcgtg
acctcgaccagagtggagaactccctggacaatgccaccaagaccatagagaactggagc
cggcgaggagccgacaatgtgcgggttggcctgccgcctcgggtggcaaccactatagac
atgggccacagccgcctgccctatatctccagcatcacggacaaccactcgccctacccc
cagagggcgctcgcttccaccttccccatccactactcggacagcgccacccagcccctg
ctggacaaatccagggtggtgacgcggcctaccccactacgctacacccttccggcccgt
ggcagccaccacttctacgagagaaccctacccatctccagcctcagcagcccccacatc
gccatgagggaccctgctccccccagcacctccagtcacaacccacaccccagcagcagg
ttgtatgtggagagccagccccggcaccccacctccccatttgtcccctacagagagttc
caggtgcctgacatctatgtggaacaccacaaggggcccctgggacggaagttcagctac
ccccctgaccacatgggcaggaagaagaggtcccacagctacgtgttttctgaggcccaa
gacaccagggggaggaatgactatgatgagccaacctcctgtctggctgagctgagggcc
aaccacctcctgaacaaccatgccccttctgcatcaaccatggcctgcatggggggccac
taccccagtggcagcgccagctgcaactcctgcatgaagccctacctggagcctgaaatg
gagaatgtgcccttgctggggaaggacaaggtcaaccgccgggcctcttttctcaaggcc
acctggagcagtgacaggatccgccagctgggcgagaagccctccacctccactatgcct
gatctgttcccccgcgtagtggtggccaaccccaagccccacaagctgtatggcagccag
gggaacaacctgtgctaccccctggcagctgagcctgcctacctagacccggctcatatg
cgttcctacccctacaagcaacagaagctcaagtgctcccagtccacccggctaccatcc
tacagggaggctatcctgcagaacgcagccgccttgcggcgctcttcctccactgtggtg
cacagacactactccacctacctgaactcctacacagacctgcctgtatacgtggggcca
ctgccccaggggccagggccgttctacgacaaggacatgtgccacttgttcccctgtgca
agccactgccctaacaacaatgcccttgtgccccgtatgggggaccgacaggtagtgtac
cagaacaatatgtttgggggctacgagggcgcggtggggcgatcgcgagaggagcccccc
ctgcccgggtctgggagcagggatcggagggaggtcctggtggccagaagagtcaacagt
ccctatgtgccaaagacctggggcagggtatccagtctggagtctgaggtctga
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