Oncorhynchus kisutch (coho salmon): 109902341
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Entry
109902341 CDS
T09179
Name
(RefSeq) sphingosine 1-phosphate receptor 1
KO
K04288
sphingosine 1-phosphate receptor 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04068
FoxO signaling pathway
oki04080
Neuroactive ligand-receptor interaction
oki04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
109902341
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
109902341
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
109902341
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
oki04030
]
109902341
04090 CD molecules [BR:
oki04090
]
109902341
G protein-coupled receptors [BR:
oki04030
]
Rhodopsin family
Lipid
Sphingolipid
109902341
CD molecules [BR:
oki04090
]
Proteins
109902341
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
DUF3278
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
109902341
NCBI-ProteinID:
XP_031642170
Ensembl:
ENSOKIG00005016263
LinkDB
All DBs
Position
LG13:42437888..42441887
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AA seq
372 aa
AA seq
DB search
MGDSMYSDLIARHYNFTGKLRKVEQDSRLKADSVVFIIVCCFIILENVLVLLTIWRTKKF
HKPMYYFIGNLALSDLLAGVVYTANILLSGANTYKLTPTQWFFREGSMFVALAASVFSLL
AIAIERHLTMLKMKLHNNGNTCRVFMLISTVWLIAAILGGLPIMGWNCIQSMPSCSTVLP
LYHKTYILFCTTVFSVILMAIVVLYARIYALVRTRSRKLVFRKVSNGRGGGSASSKSSEK
SMALLKTVIIVLSCFIACWAPLFILLLLDVACDIRMCAILYKAEWFLALAVLNSAMNPLI
YTLTSNEMRRAFLKTLMCCSVCTRPSGKFSRPIMGAEFSRSKSDNSSHPNKDEPEYSPRE
TVVSSGNITSSS
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgggtgactcaatgtattccgacttaatagccagacactacaacttcacagggaagctc
cggaaagtggagcaggattccagactcaaagcggactctgtggttttcatcattgtatgt
tgcttcattatccttgagaatgtcttggtcctgcttaccatttggaggaccaagaagttc
cacaaacccatgtactactttattgggaacttagccctatcagacttgctggctggtgtg
gtgtacactgccaacatcctgctgtcaggtgccaacacatacaaactgacccccacacag
tggttcttccgggaggggagtatgtttgtggccctggcagcctcagtcttcagcctgctg
gccatcgccatcgagcgccacctcaccatgctgaagatgaagttgcacaacaatggcaac
acgtgccgtgtcttcatgctcatcagcaccgtgtggctgattgcagccatcttgggcggc
ctgcccatcatgggctggaactgcatccagagcatgcccagctgctccaccgtactgccg
ctctaccacaagacctacatcctgttctgcaccaccgtcttcagtgtcatcctcatggcc
atcgtggtcctgtacgcgcgcatatacgccctggtgcgcacccgcagccgcaagctggtg
ttccgcaaggtctccaacggccgcggcgggggtagcgctagcagtaagagctcggagaag
tccatggccctgctgaagaccgtgatcatcgtgctgagctgtttcattgcctgctgggct
ccactcttcatcctcctgttgctggacgtggcctgcgacatccgcatgtgtgccatcctg
tacaaagccgagtggttcctggccctggccgtgctcaactcggcaatgaaccccctcatc
tacacgctcaccagcaacgagatgcgccgcgccttcctaaaaacgctcatgtgctgcagt
gtctgtacccggccctctggcaagttctctcggcccatcatgggtgcagagttcagccga
agcaagtcggacaactcgtcccaccccaataaggacgagccagagtactcgccaagggag
accgtcgtatcctctgggaatatcacctcctcttcttaa
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