Oncorhynchus kisutch (coho salmon): 109902726
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Entry
109902726 CDS
T09179
Name
(RefSeq) nucleoprotein TPR-like isoform X1
KO
K09291
nucleoprotein TPR
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109902726
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109902726
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109902726
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
109902726
NCBI-ProteinID:
XP_031641650
Ensembl:
ENSOKIG00005047953
LinkDB
All DBs
Position
LG13:24412828..24450626
Genome browser
AA seq
2376 aa
AA seq
DB search
MATVLLQALERAEIAKLPKAVQNKLEKLFSDLQYEIDSLKSHQEQFRVDSEQQFFEKVQR
LEQSQEQFVTQTEQHHKLREEFTKIDEELKSVLEKNKEYEINQEKLTSEQAQLCKAKNEL
EAEKRELVRTLERRSQEVAYLSEDLQRLNDKVAEVNASKMGLQLKLDELESSEVNIKYRE
KRMEQEKELLRGQTAWLNAELKAKSEELLALSRQKGNQILELKCSLENKEDELNRVQEQV
TSLKTSNEGLQKQAEDIINKLKEDKEQQASMEEKFRNELNANIKLSNLYKGAAADSESKS
EELSGAVEELQKLLKDAGEANKALEVRLQEMDDCRDNEAAALKERIINLEKELENANELL
SDTKLKGSAGAASVLSEETITTMSPTAVAVAKIVKPGMKLTELYTAYVETQEALQLERVE
NKRVNKYLDDIVQEVEAKGPILKRQRDEHERMQKSVASLSSKLEQAVKEVHRLQKVTDEA
NKRSSVLERDNQRSDVQLADMGQQIRVLLIELEEARGNHVGHDEEVSSADISSTSEVITQ
HLVTFRGVEELQQQNQRLLVALRELSEAQEREEEETTGTKCSELECSLEKAQAELEALRE
QRSHQMQLAESIVRQRDMYRVLLAQATGVSFPQQGAAAAEEFSSTPRRSPAATPTTPTGI
ITMATESTEVVEAKAALRQLQEVFSSYKRERSESDKTLMEQSEKLQKQVSDQRFQNAKIS
TQLEFTSKRYEMLQDNVKGYRKEIASLMEKGQKMAAAAQTCEQTVHTMTQDLRVAQEKLN
MAEGRAESLRKEREMLKLVESRLTQEKETMQTQQRGQNMLLTNLKTIEATLERSETDTRQ
RLNAQIEKQEREIGQLQKRLEHEVEQRHLLSRNQDLQLMDAKRQLETQTALLQKTRDQLS
AAQLEVSSLRLQQGSGEGGRLSLSSPPTPMGIRGFQVSEGDSEDLHGRLKQAETRAEELT
EQLRTATSSMELYRAMAQSLEESLDKEMQVTEQARSAIEERVKEAQEQHRQLEKKLLEAE
KEKQGLQEEKMKALASVEQQVAVLRRSLSSVQADHQEALQMAAVAAAQEQQAMLDSQEQA
KLASEAQDKYEREMMLHAADVESLQAAKAQALQAATLRQQLEERAQRASAQLLEARVSWE
EQERILKEEMSKVVSRSEELQRQNSLLHEQIQTMSCKMAATLQRQANESPLNISLTEEGK
SQDQVLEILRFVRREKEIAESRFEVAQGESLRHRLRVEHLERELRELQESLSAERERMQV
TAKTLAKHDELMKKTETMSVLMETNKMLREEKERMEQELQQTQAKVRKLESDIMPMQESN
AELSEKSGMLQAEKRILEEDIKRWKARTQHLVSQQKDTDPEEYKRLHSEKEAHLKRIQQL
TEETGRLKAEVARSGGSVTSLQSQVQMLREGLGKVSSDRDALRRSMEAKNLDIQEKFRTI
TQVKKIGRRYKTQYEELKVEHDKMVFEAASTPAQEQEAQQASAQELQGLKDSLGQAETRT
KDLEGQLDNLNKVVGEREAEVRGSQEQASRLQTELTRLRQELQEKASQEDTLRQQMAEKE
EKTRKAFVGAKQRINQLMGSKDQLQKENEELKQQREELEVRVSALKSQYEGRLSRQEREL
RDLREQQERHGEQRDEPLEQGPSKAQEQQRTTEQRGPLKTTQAADRGSTSTSEPPTANIK
PTPLGAQGPSKPPAIPGNKPTPRASIRPMITPATVPTPTPTATVMPTTQVENQEAMQSSE
GPPEHVTVYGSASGSVRSTSPNVQTTNPMLVVQQTQTQTTAFVQPTQQQSLPHTEPANQE
QPPAPVMEAAPSSQMERPSTSTAVFGTVSATPGTSSMSKRPREEEQDSPYGPDTDTPQED
PSEPPIPKKLRIIQRVDPEEPEAQEEVLAEGSAEGLVPGESQEAPETSQVVEEYPVLEEA
EEGAASQSVPVELLLSETAFISFSYDANEEPPQHDVIVIVTDSESEDEQQEEVEVEEDEE
EEPDYEEEEDDDDDEEDEEEDEDDGGMGDEGEESNEGSRDGNEAYEGDDTEGPDGTDPGT
ETEESLGASDSTQRPADSQTHSFEGSSSMEAFSSDPTSSAPRMHQSPRRAPHPLPPRLNI
NQERGPPAQVQRPMRRQSVGRVPQLTPGMASGGVSHNIGQHFFDDDDRMVPSTPTLVPPH
RSDSFAEAIHSPQVAGVPRFRFGTPEDLMPQTTTSHSDLGHLASQGGLGMYDSPLFLPGH
EDESGGLSVPTTPLQVAAPVSIFAEVPPSDGTEHTSQSVPMVTTSTPGLVVAEGPSPGDE
RADVFMAPGGDLVEVSLEPVMSRAGEIEEPTQVSDDCGLPSTSQELSSSSADTSRTQPKP
SRPGHSRQLQRWTENRMRRGTLPSRGVTGTGRRFAR
NT seq
7131 nt
NT seq
+upstream
nt +downstream
nt
atggctacagtgctacttcaagcgttggagcgcgctgagatagcgaagctaccaaaagct
gttcaaaataaactagaaaagttattttctgatctgcaatatgaaatagattccctcaag
tcacaccaggagcaatttagagtcgatagcgaacaacagttctttgagaaagtgcaacgt
cttgaacagagtcaggaacagtttgtgacccagactgaacagcaccacaaactccgagag
gagttcaccaagatcgatgaagaactcaagagtgtactagaaaagaataaagagtatgaa
atcaaccaagagaagttgacatctgaacaggcccagctctgtaaagccaaaaatgaactg
gaggcagagaagcgggagcttgtacgtacattggagaggagatcccaggaagtggcctat
ctgagtgaggacctgcagcgcctcaatgacaaagtggcggaagtcaatgcctcaaagatg
gggctgcagctcaagttggatgagcttgaatcctcagaggtcaacatcaagtaccgtgag
aagcgtatggagcaggaaaaggagctgttgcgaggccagactgcctggctgaacgcagag
ctcaaggctaaaagtgaggagctgctggctctttcacgccagaagggcaaccagatcctg
gagctgaagtgcagcttggagaacaaagaggatgagttgaacagagtccaggaacaagtg
accagtttgaagacttcaaatgaaggccttcagaagcaggctgaagacataatcaacaaa
ctgaaagaggataaggagcagcaggctagcatggaggagaagtttagaaacgagctgaat
gccaacataaagctctccaacttgtacaagggagctgctgcagactctgagtccaagagt
gaggaattgagtggggctgtagaggagctgcagaagctgctgaaagatgctggagaggcg
aacaaggccctagaggtgaggttgcaggagatggatgactgtcgggacaatgaggctgct
gcgctgaaggagaggatcatcaatttggaaaaagaactggagaacgccaacgaactgctg
tccgacaccaagctcaaaggctctgccggtgcagcctcagtgctgtcagaggaaacgatt
accaccatgtccccgaccgcagtcgccgttgccaagatagtcaaacctggcatgaagctg
actgagttgtacacagcgtatgtggagacccaggaggcactgcagctggagcgtgtggag
aacaagcgggtgaataagtacttggatgacatagtgcaggaggtggaggctaagggtccc
atcctcaaacgccagagggatgagcatgagcgtatgcagaaatctgtggccagcctttca
tccaagctggaacaggcagttaaggaggttcaccgtctgcagaaggtgactgacgaggcc
aacaagcgctcttctgtcctggagagagacaaccagaggtctgatgtgcagcttgcagac
atggggcagcagatccgtgtcctactcattgagctggaggaggcgcgtggtaaccatgta
ggccacgacgaggaggtgagctctgctgacatcagcagcacgtcagaggtcatcacgcag
cacctggtgacgtttcgtggggtggaggagctccagcagcagaaccagcgcctcctggtg
gccctccgagagctcagcgaagcacaggagagggaggaggaagagaccactggcaccaag
tgcagtgagctggagtgcagtctggagaaggcccaggcagagctggaggctctgcgagag
cagcgtagccaccagatgcagctggctgagtccatcgttaggcagagagatatgtacaga
gtgctgctggcccaggccaccggagtcagcttccctcagcaaggtgcagcagctgctgag
gagttctctagcaccccccgccgctccccagccgccacccccaccacacccactggaatc
attactatggcaaccgagtcaaccgaggtggtagaggccaaggcagccctccgacagttg
caggaagtgttctcttcctataagagggagaggtctgagagtgacaagaccctgatggag
cagagtgagaagctacagaagcaggtgtctgatcagagattccagaatgccaagatatcc
acccaactggagtttacctccaagaggtatgagatgcttcaggataatgttaagggctac
aggaaggagattgcctctctgatggagaagggacagaagatggctgctgcagcccagacg
tgtgagcagactgttcacaccatgacccaggacctgagggttgcccaggagaaactaaac
atggcagagggtcgtgctgagagcctcaggaaggagagagagatgctgaagttagtggag
tccagactgacccaggagaaggagaccatgcagacccaacaacgaggacagaacatgctg
ctcaccaatctcaagaccatagaggccacgttggagcgctccgagacagacaccaggcag
cgtctgaacgcccagatagagaagcaggagagggagatcggccagctgcagaagagactg
gagcacgaggtggagcaacgccacctgctgagcagaaaccaagatttgcagctgatggat
gccaagaggcagctggagacccagacggccctgctccagaagaccagggatcagctgagt
gctgcccagctggaggtgagctctctcaggctgcagcagggcagtggagagggtggtcgt
ctgtccctgagctccccgcccactcccatgggcatcagaggtttccaggtttcagaaggg
gactctgaagatctgcatggccgcctgaagcaggcagagacacgggcagaggagctgaca
gagcagctgaggacagccacctccagcatggagctgtacagagccatggcccagagccta
gaggagtccctggacaaggagatgcaggtgacagagcaggctcggtctgccattgaggag
cgtgtgaaggaagcccaggagcagcaccgtcagttggagaaaaagctcctggaggcagag
aaggagaagcagggcctgcaggaggagaagatgaaagccctggcctccgtggagcagcag
gtggctgtgctgagaaggagtctgagcagtgtgcaggcggaccaccaggaggctctacag
atggcggcggtggcagcagcccaggaacagcaggccatgctggacagccaggagcaggca
aagctggcgtcagaggcacaagataagtatgagcgtgagatgatgctccatgctgcagac
gtggagtccctccaggcagccaaggcccaggccctgcaggcagccacgctcagacagcag
ctggaggagagggcccagagagcctctgctcagctgctggaggccagagtctcctgggag
gaacaggagaggatcctcaaggaggagatgtctaaggtggtgtctcgttctgaagagctg
cagaggcagaacagcctcctccatgaacagattcagaccatgagctgcaagatggccgcc
accctgcagcgccaggccaacgagagccctctgaacatctccctcacggaggaaggcaag
tctcaggaccaggtccttgagatactcaggtttgtgcgccgagagaaggagatagcggag
tctcgattcgaggtggcccaaggagagagtcttcgccataggctgagagtagagcacctg
gagagagagctgagagaactacaggagagccttagtgctgagagagagcgaatgcaggtg
acagctaagaccctggctaagcacgatgagctgatgaagaagaccgagaccatgagtgtc
ctgatggagaccaacaagatgctgagggaggagaaggagaggatggagcaggagctccag
cagacacaggctaaagtgcgtaagctggagtccgacataatgcccatgcaggagtccaac
gctgaactgagtgagaagagcggcatgctgcaagcagagaagaggattctggaagaggac
atcaaacgctggaaggccagaacacagcacctggtgagccaacagaaggacacagaccca
gaggagtacaagcgtctccactctgagaaggaggctcacctcaaacgcatccagcagctc
actgaggagacgggcagactcaaggctgaggtggccaggagtggcggctcggtgacgtcc
ctccagagccaggtgcagatgctgcgtgagggtctggggaaggtgagctctgacagggat
gctctgaggaggagtatggaggccaagaacctggacatccaggagaagttccgcaccatc
actcaggtcaagaagatcggacgccgctacaagacacagtatgaggagctcaaggtggag
cacgacaagatggtgtttgaggcagcgtccaccccagcccaggagcaggaggcccagcag
gcctcagcccaggagctccagggtctgaaggactccctgggacaggctgagacccggacc
aaagacctggagggacagctggacaacctcaacaaggttgtgggtgagcgtgaggcggag
gtgcgcgggtcgcaggagcaggcctccaggctgcagacagaactgaccaggctgagacag
gagctgcaggagaaggcctcccaggaggacaccctcagacagcagatggctgagaaggag
gagaagaccaggaaggcctttgtcggggccaagcagaggatcaaccagcttatgggctcc
aaggaccagctgcagaaggaaaatgaggagctgaaacagcagagggaggagctggaggtc
agagtcagtgctctgaagtcccaatacgagggccgtctgagccgccaggagagggagctg
cgggacctgagagaacagcaggagagacacggagagcagagggatgagcctcttgaacag
ggtcccagcaaggctcaggaacagcagaggaccacagagcagcgaggaccactgaagacc
acccaagctgcagaccggggcagcaccagtacctctgagccccctactgccaatatcaag
cctacccctctgggtgctcaaggccccagcaagccccctgccatccccgggaacaagccc
accccccgggcaagcatcaggcccatgatcacccccgccaccgtgcccacccccacccct
actgccaccgtcatgccaaccacacaggtggagaaccaggaagccatgcagtcatccgag
ggcccgcctgagcatgtgactgtttacggcagtgccagcggttcagtacggtcaaccagc
cccaatgttcagaccaccaacccaatgctggtggtccagcagacccagacccagaccaca
gccttcgtccagccaacacagcaacagagcctgccccacactgaaccagccaatcaggag
cagcccccggccccagtaatggaagcggcacccagttcgcaaatggagaggccgtcgacg
tcaacagccgtgtttggtacagtttcagccacgccaggaacatcttccatgtccaagaga
cctcgtgaggaggagcaggacagcccttatgggcctgacacagacaccccccaggaggac
ccctctgaaccccccatccccaagaagctacgcatcatccagagagtcgacccagaggag
ccagaggcccaggaggaggtgctggctgagggcagtgcagagggactggtgcctggagag
agccaggaagccccagagaccagccaggtggtggaggagtacccagtactagaggaggct
gaagagggtgcagcgtctcagtctgtccctgtagagctgctcctgtccgagaccgcattc
atctcattttcatacgacgccaacgaagaacccccccagcacgatgtcatcgtcatagtg
accgactctgagagcgaggacgagcagcaggaggaggtggaggtggaggaggatgaggaa
gaggaaccggactatgaggaggaggaggatgacgacgacgacgaggaggacgaggaggag
gatgaagatgatggagggatgggggatgagggggaggagagcaatgaagggagcagagat
ggcaatgaggcatatgaaggcgacgacacagagggtcctgatgggacagacccaggcacg
gagacggaagagagtctaggagcatctgactccacccagcgcccggctgactcccagaca
cacagcttcgagggcagcagcagtatggaagccttctcaagtgacccaaccagctctgct
ccccgaatgcaccagtctccacggcgagcaccccatccgctgcccccccgcctcaacatc
aaccaggaacggggaccccctgctcaggtacagcgccccatgcgtcgccagtcggtaggc
agagtccctcagctcacccctgggatggccagcggcggagtaagtcacaatattggacag
cacttttttgacgatgatgacaggatggttcccagtactcctactctggtgccgccacac
cgctctgacagctttgcagaagctatccattctccccaggtggctggtgtaccccggttc
aggttcggcaccccagaggacctgatgccccagaccaccacctcccactctgacctggga
catctggcatcacaaggaggtcttgggatgtatgatagtcctttgttcctgcctggtcat
gaggatgagtctggtggcctcagtgttcccaccacacccctgcaggtggctgccccagtg
tccatatttgcagaggtcccgccatctgacggcacggaacacacctctcagtctgttccc
atggtaaccacctcaaccccaggcttggtggtggccgaaggaccaagtcctggggacgag
agggctgatgtcttcatggcgccggggggagaccttgtggaggtgtctctggaacctgta
atgtctcgggcgggggagatagaggaacctacccaggtctcagatgactgcggcctgcct
tctaccagccaggaactctcctccagctctgcagacactagtaggactcagcccaaaccc
tctagaccaggacacagccgacagctccaacgctggacagagaaccgcatgaggagaggg
acgttgccatcacggggtgtaactgggactgggaggagatttgcccgataa
DBGET
integrated database retrieval system
