Oncorhynchus kisutch (coho salmon): 109905223
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Entry
109905223 CDS
T09179
Name
(RefSeq) beta-1,4-galactosyltransferase 1
KO
K07966
beta-1,4-galactosyltransferase 1 [EC:
2.4.1.22
2.4.1.90
2.4.1.38
2.4.1.-]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki00052
Galactose metabolism
oki00510
N-Glycan biosynthesis
oki00513
Various types of N-glycan biosynthesis
oki00514
Other types of O-glycan biosynthesis
oki00515
Mannose type O-glycan biosynthesis
oki00533
Glycosaminoglycan biosynthesis - keratan sulfate
oki00601
Glycosphingolipid biosynthesis - lacto and neolacto series
oki01100
Metabolic pathways
Module
oki_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
oki_M00075
N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
109905223
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
109905223
00513 Various types of N-glycan biosynthesis
109905223
00515 Mannose type O-glycan biosynthesis
109905223
00514 Other types of O-glycan biosynthesis
109905223
00533 Glycosaminoglycan biosynthesis - keratan sulfate
109905223
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
109905223
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
oki01003
]
109905223
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109905223
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oki04147
]
109905223
Enzymes [BR:
oki01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.22 lactose synthase
109905223
2.4.1.38 beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
109905223
2.4.1.90 N-acetyllactosamine synthase
109905223
Glycosyltransferases [BR:
oki01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
109905223
Membrane trafficking [BR:
oki04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
109905223
Exosome [BR:
oki04147
]
Exosomal proteins
Exosomal proteins of breast milk
109905223
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_7N
Glyco_transf_7C
Glyco_tranf_2_2
Motif
Other DBs
NCBI-GeneID:
109905223
NCBI-ProteinID:
XP_020358074
Ensembl:
ENSOKIG00005012681
LinkDB
All DBs
Position
LG15:34096358..34116673
Genome browser
AA seq
351 aa
AA seq
DB search
MRDSVNFSVLHRTCKLVVLLCFFHISVTFIFYVRSLDFRFAFAKHDQTASKDTVPDAFET
NHFSVDNVTTITKELGKCPDTSPLLVGPLRIEFSNPVSLDVVRKENPNLKNGGRFKPKDC
VALQKVAIIIPFRNRDEHLKFWLYYLHPILQRQQLDYGVYVINQDGDEVFNRAKLLNVGY
SEALKEYDYGCFVFSDVDLIPMDDRNTYRCFSQPRHLSVSMDKFGFRLPYNQYFGGVSSM
SKEQFLKINGFPNNYWGWGGEDDDIFNRLNSKGMTISRPSGAVGKCRMIRHNRDGGNEDN
PQRFDRIAHTKETMNKDGIKTLSYKVVKVEKDQLYTKITVDVGKKMTLQTN
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgcgggattcagtgaatttcagtgttctccatagaacctgcaagttggtcgtccttcta
tgttttttccatatttcggtcactttcattttttacgtgaggtcgttagattttcgtttt
gcatttgcgaagcacgaccaaactgcatcaaaggacacagtaccggacgcgtttgaaacg
aaccacttttctgtagacaacgtgactacaatcaccaaagagcttggaaaatgtcctgac
acatcgccactgcttgttggcccactgcgaattgagttctccaacccagtcagcctggac
gtggtaaggaaggaaaaccccaatcttaagaatggggggcgcttcaagcccaaagactgc
gtggccctccagaaggtggccatcatcatccctttccgcaaccgcgacgagcacctcaag
ttctggctctactacctccaccccatccttcagcgccagcagttggactatggcgtctat
gtcatcaaccaggacggcgatgaagtctttaaccgtgccaagctcctcaacgttggctac
tcggaggccctgaaggagtacgactacggctgctttgtgttcagtgacgtggacctcatc
cccatggatgaccgcaacacctacaggtgcttcagccagcccaggcacctgtctgtttcc
atggacaagtttggcttcagattgccgtacaaccagtactttggaggcgtgtcgtcaatg
agcaaggagcaattcctcaagatcaacggcttccccaacaactactggggctggggagga
gaggacgacgacattttcaacaggctgaactccaaggggatgaccatctcacggcccagc
ggagccgtggggaaatgcaggatgatccgccacaaccgggatggtgggaacgaagacaac
ccacagaggttcgaccgcatcgcccacaccaaggagaccatgaacaaagatggcataaaa
accctgtcgtacaaagtggtcaaagtggagaaggatcaattatacaccaaaattactgtg
gacgtggggaaaaaaatgactctgcaaaccaattaa
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