Oncorhynchus kisutch (coho salmon): 109907987
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Entry
109907987 CDS
T09179
Name
(RefSeq) laminin subunit beta-2-like isoform X2
KO
K06243
laminin, beta 2
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04510
Focal adhesion
oki04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109907987
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109907987
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
LAMININ_IV_B
Laminin_N
F5_F8_type_C
EzrA
Alanine_zipper
Motif
Other DBs
NCBI-GeneID:
109907987
NCBI-ProteinID:
XP_020361905
Ensembl:
ENSOKIG00005033497
LinkDB
All DBs
Position
LG17:58122553..58171257
Genome browser
AA seq
1800 aa
AA seq
DB search
MHASLVMFICDPMEKLTESPFVTPAALAYATAREPDHAHGCTHGSCYPATGDLLVGREKS
LKASSTCGSRKKDPYCIVSHLQDEKKCFQCDSRRPYDPVYNTISHRIENVITTFKPHRKK
SWWQSENGKPDVFIQLDLEAEFHFTHLIMIFKTFRPAAMVIERSADFGRNWQVYRYFAYD
CASVFPGVSKGPLRKVDDVICESRYSDIEPSTEGEAIYRVLDPAIHIEDPYSPNIQNQLK
ITNLRVNFTKLHTLGDNLLDSRVEIKEKYYYAMYELVVRGNCFCYGHASECAPIDGIKDE
EGMVHGRCVCKHNTKGLNCELCDDFHSDMPWRPAEGRNTNACKKCNCNGHSNQCHFDMAV
YLATGNAGGGVCDHCLHNTMGRNCEMCKPFYYKDLSRDIRDPGVCTACDCDPDGSLNGGI
CDGHDEPSLGMIAGQCRCKDHVEGHRCDKCKSGFFGLSAANPRGCQPCQCDPRGTVSESP
KCDPVSGDCFCKRLVTGRSCDLCLPEHWALSHDMNGCRDCDCDVGGATDNHCSMENGQCR
CRSHMMGRQCTQVESGWYFMALDHYTYEAELAILGQGCSVEQREHQPGRPATWTGTGFAK
VPEGSSLEFSINNIPYSMEYDLLIRYEPQMPRDWGEVRVTIIRPGPIPTSSPCGNTIPAD
DMLTVSLPAGSRFVVLPPPVCMERGVSYTLRFEFSRYLDGNSILILGTTAANILVDSISL
IPRYSSLEMFIGGDPASIARKQSYERYRCHEGAKSVTRPQISNVCAKLITSMSAIINHGA
LPCLCDPQGSVSSVCDTHGGQCRCRPNVIGLRCDQCAPGTYGFGPAGCKACECNLEGAVT
RSCDQLTGQCPCRPGAFGQRCDGCQAGHWGFPNCKRCLCNGHAEECHQRTGACLNCRDNT
GGDKCDRCANGYYGNPVLGTGMGNQCRACPCPDGPNSGRHFAASCYQDNRNRQVVCNCNQ
GYTGSRCEECAPGYYGNPSQPGGRCQPCRCSNNIDMSDLDACDRRTGECKKCLYNTEGPD
CGVCKSGYYGDASRRNCRKCTCSFLGTEHTQCTARDECVCQRATGQCQCLPNTIGLTCDH
CKPNYWNLASGRGCEACGCDPNNAVNSACNEFTGKCQCRDGFGGKTCTDCQENYWGDPRI
QCRVCDCDPRGIETSQCDQKSGHCVCQQGVSGVRCDQCARGFSGQFPNCQPCHQCFGDWD
RVVQDLAVRTKTLSERAQEIQTTGLTGAYEKAFRDLEKKLAQAQGIVNARNTTAEAVSSL
MELIEDLRSQIGETTDTLNRLEGDLTSVQNSNVEASNELSALEREAKQLNLTSDQLHRQL
DILKNSNFLGAYDSIHSSYNKSRDAERRANQSTTTTPSTVSQSADTRRKTERLISAKKDD
FNRKNAANKRALGDLNAKAQTLDMKKINEKVCGTPGDAPCAESLCGGAGCRDDEGNRHCG
GLNCNGAVAMADNALERSKHAEKELNKAMGEVEELFHKVADAKTKAEEAKSKAQAALDKA
TNTKNKVERSNNDLRDLIKQIRDFLMQEGADPDSIETVANRVLELSIPASPQQIRHLAEE
IKDRVRSLSNVDAILQQTQDDVRKAEQLLQEAKKARNRAEGVKSTAETVKQALEDAKKAQ
ATAEKAIQRARADIGETEARLAQIESETSSSEHDLNDAMDRMGNLGREINALKLKRAHNS
VAAARAEETATMARDKANEAKQILDGELMDKYHTVQELVDTKAKTVQEAKKKAERLRDEA
KELLKDAQNKLQRLAELEKDYEENQKTLEGKAQQLDGLEDKMKAILNDINKQIQIYNTCQ
NT seq
5403 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcgtcactggtaatgttcatatgtgatccaatggagaagttgactgaatctccg
ttcgtcactccagctgccctggcatatgccactgcccgggagccagaccacgcccacggc
tgtacccatggcagctgttacccggcaacaggagacctgttggtgggccgtgagaagagc
ctgaaggcatcatctacatgcggctccaggaagaaagacccctactgcatcgtcagtcac
ttacaggatgagaagaaatgtttccagtgtgactctcgccgcccatatgatcctgtctac
aacaccatcagtcaccgcattgagaacgtcatcacaacgttcaaaccacaccgcaagaag
tcatggtggcagtcggagaatggaaagcctgatgtcttcattcagctggaccttgaggca
gaattccattttactcatcttatcatgatcttcaagacatttcgcccagcagccatggtg
attgagcgatcggcagattttggacgtaactggcaggtgtaccgctactttgcctacgac
tgtgcctcggtcttccccggggtatctaagggacccctacgcaaagtagacgacgtcatc
tgtgagtcgcgctactctgacatcgagccgtccacagagggagaggcaatctacagagtt
ctggaccctgccatccacattgaggacccctacagccccaacattcagaaccagctgaag
atcactaacctgcgtgtgaacttcaccaagctgcacactctgggagataacctgctggac
tcccgcgtggagatcaaggagaagtactactatgccatgtacgagctggtcgtccgcggc
aactgcttctgctatggccacgcctccgagtgtgcccccatcgatgggatcaaggatgag
gagggcatggtccatgggagatgtgtctgcaagcacaacacgaagggtctgaattgtgag
ctgtgtgatgacttccatagtgacatgccctggagaccggctgagggacgcaacaccaac
gcctgcaagaaatgtaactgtaacggccactccaaccagtgtcactttgacatggcggtt
tacttggccacgggcaatgccggcggtggcgtctgtgaccactgtctccacaacaccatg
ggacgcaactgtgagatgtgtaaaccattttactacaaggacctcagtagggacatcaga
gaccccggggtctgtactgcctgtgactgtgatcctgatggttccctgaatgggggcatc
tgtgacgggcatgacgagccatccctgggcatgatcgctggacagtgccgctgtaaggac
cacgtggaagggcatcgctgtgacaaatgcaagtctggcttctttggcctgagtgcagca
aacccccgcggctgccaaccctgccagtgtgaccccaggggtactgtttcagagagccca
aaatgtgaccctgtgagcggggactgcttttgcaagcgactggtcaccggacgcagctgt
gacctgtgtctgccagaacactgggcactgagtcatgacatgaatggctgcagagactgt
gactgtgatgtgggcggagccacagataaccactgctctatggagaatggccagtgccgc
tgtcgtagtcatatgatgggccgtcaatgtacccaggtggagtctgggtggtacttcatg
gctctggaccactatacctatgaggctgagttggccatattgggacagggctgcagtgtg
gagcagagggagcaccagcctgggcgccctgccacctggactggcactgggtttgccaag
gtcccagagggcagcagcctggagttctccatcaacaacatcccctactccatggagtac
gacctcctcatacgctatgagccacagatgccacgggactggggggaggtccgtgtgacg
atcattcggccagggcccattcccaccagcagcccttgtggaaacaccatccctgcagac
gacatgctcactgtgtccctgcctgcaggatccaggtttgtcgtgctgcctccacctgta
tgcatggagagaggagtgagctacactcttcgctttgagttcagtcgctatctggatggg
aacagtattctcattcttggtacaaccgctgccaacattttagtggactctatctccctg
atccctcgttactcctccctggagatgttcattggcggtgaccccgcctccatcgctagg
aagcagagctacgagcgctaccgctgccacgagggggccaagagcgtgacacgcccccag
atcagcaacgtctgtgccaaactcatcaccagcatgtcagccatcattaaccatggagcc
ctgccttgcctgtgtgacccccagggatcagtcagctcagtgtgtgacacgcacggaggt
cagtgtcgctgtaggccaaacgtgattggacttcgctgtgaccagtgtgctcctgggacg
tacggctttggacctgcaggatgtaaagcatgtgagtgcaatctggaaggtgcggtcact
cggtcctgtgaccagttgactgggcagtgcccgtgccgcccgggtgcgttcgggcagcgg
tgcgatggctgccaggcaggacactggggcttccccaactgtaagcgatgcctgtgtaat
ggacatgctgaggagtgccaccagaggaccggagcctgtctcaactgcagggacaacact
ggaggggacaaatgtgacaggtgtgccaacggttactacggcaacccagtgttgggcaca
ggtatgggtaaccaatgtcgggcctgcccttgcccagatggcccaaacagcggacgccac
ttcgctgcctcctgttaccaggacaaccgcaacagacaggtggtctgcaactgtaaccaa
ggatacacaggttcccggtgtgaggagtgcgcccctggttactacggtaacccctcccag
ccaggtgggcggtgccagccgtgcaggtgcagtaataacattgacatgtcagatctggat
gcgtgtgaccggcggacaggagagtgtaagaagtgtctctacaacacagagggaccggac
tgtggcgtgtgcaagagcggttactatggagacgcctcgcgacgcaactgcagaaagtgc
acctgtagcttcctgggcacagagcatacccagtgtacagcgcgggatgagtgtgtctgc
cagcgtgccacggggcagtgccagtgtttacccaacaccatcggcctgacatgtgaccac
tgtaagcccaactactggaacctggctagtgggcggggctgtgaggcctgcggctgtgac
cccaacaatgctgtcaactcggcctgcaacgagttcactggaaagtgtcagtgtcgtgat
ggattcggtggaaagacctgcacagactgccaagagaactactggggagaccccaggatc
cagtgcagagtctgtgactgtgaccccaggggcatagagacatcccagtgtgaccagaag
tcaggccactgtgtgtgtcagcagggggtgtcaggcgtgcgttgtgaccagtgtgcgagg
ggcttctcaggccagttccctaactgccagccctgccatcagtgctttggggactgggac
cgggtggtgcaggacctggctgtccgaaccaagaccctgtcagagcgggctcaagagatc
cagaccacgggcctgactggagcctatgagaaggccttcagagacctggagaagaagctg
gcacaggcccagggcatcgtcaacgcccgcaacaccaccgcagaggcagtcagcagcctg
atggagctcattgaagacctcaggtctcagataggtgagaccacagacacactgaatcgt
ctggagggagacctgaccagtgtgcagaacagcaacgttgaggccagtaatgagctcagt
gctctggagagagaggccaaacagctaaacctgacctcagatcagctccaccgtcaactg
gacatcctcaagaactccaacttcctgggtgcatatgacagcatccacagctcctataac
aagtcccgtgatgcagagcggcgagccaaccagtcaaccaccaccacgcccagcactgtt
agccaatcagcagacacacgccgcaagacagaacgcctcatctctgccaagaaagatgac
ttcaaccgtaagaacgctgccaacaagcgagccctgggggacctcaatgccaaggctcag
accctggacatgaagaagatcaatgagaaggtctgtgggacccctggcgatgccccctgt
gcagagagcctttgcggaggagcaggttgccgtgacgatgaggggaataggcactgcgga
ggcctgaactgcaacggtgccgtagcgatggcagataacgccctggagaggtccaagcac
gcagagaaagagctgaacaaagccatgggggaggtagaggagctcttccacaaggttgca
gatgccaagaccaaggcggaggaggcgaagagtaaagcccaggcagctctggacaaggcc
accaacaccaagaacaaggtggagcgctccaacaatgacctgcgggacctcatcaagcag
atccgggacttcctcatgcaggagggtgcggatccagacagcattgagacggttgccaac
cgtgtcctggagctgtccatcccagcctcaccacagcagatcagacacctggcagaggag
atcaaggaccgggtccggagcctctccaacgtagacgccattctgcaacagacacaggac
gatgtgcgcaaagcagagcagctgctgcaggaggccaagaaggccaggaatcgggcagag
ggggtgaaatccacagcagagacagtaaaacaggcacttgaggatgctaagaaggcccag
gccacagcagagaaggccatacagcgggctcgggctgacattggtgaaacggaagctcgg
ctagcacagattgagtctgagacctcaagcagtgaacatgacttgaatgatgccatggac
cgcatgggcaacctaggtcgggagattaatgctctgaagctcaaacgtgcccacaacagc
gtggcagcagctcgagctgaggagacagccactatggcacgggacaaagccaatgaggct
aagcagattttagatggcgagctgatggataagtatcacacagtgcaggagttggtggac
acgaaagccaagaccgtccaggaggcgaagaagaaagcagagcgcctaagagacgaagcc
aaagagctactgaaggatgcccagaacaagcttcagagactagcagagctagagaaagac
tatgaagagaaccagaaaacgttggagggcaaagcccagcagctggacggcctagaagac
aagatgaaggctatcctcaacgacatcaacaaacagatccagatctacaacacctgtcag
taa
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