Oncorhynchus kisutch (coho salmon): 109909980
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Entry
109909980 CDS
T09179
Name
(RefSeq) glycogen debranching enzyme isoform X1
KO
K01196
glycogen debranching enzyme [EC:
2.4.1.25
3.2.1.33
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki00500
Starch and sucrose metabolism
oki01100
Metabolic pathways
Module
oki_M00855
Glycogen degradation, glycogen => glucose-6P
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
109909980
Enzymes [BR:
oki01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.25 4-alpha-glucanotransferase
109909980
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.33 amylo-alpha-1,6-glucosidase
109909980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
hDGE_amylase
GDE_C
hGDE_central
hGDE_N
Alpha-amylase
Motif
Other DBs
NCBI-GeneID:
109909980
NCBI-ProteinID:
XP_031652278
Ensembl:
ENSOKIG00005038159
LinkDB
All DBs
Position
LG18:complement(61131056..61162389)
Genome browser
AA seq
1535 aa
AA seq
DB search
MVRSRQTRVLFLNDMERLERTLFRLEQGFELQFRLGPTLQGRHVQVHTNYPAEGEKFDRV
KFWPLNWINPTGREDDSDKYCKLDLQVAGSYQYYFCAGTEEKTGSGYIVVDPVLRVGADN
HVLPLDCIAIQTYLAKCLGPLDEWQDRLRVAKETGYNMIHFTPLQKLGMSRSCYSLADQL
ELNPEFSTEGKNYTWMDVGNLVEKLKKEWNMVCITDVVYNHTAANSRWLCLHPECGYNLV
NSPHLKPAWVLDRALWHLTCDIADGKYSGHGVPAHIENEHQLHMLRGVLWDEIYPRTKLW
EFYQVNVEKAVEQFRKLLQAGGKAVRLENEDKKRLRILPDPHGRRFGNTVDMTSALETFI
PNGNEPSSIQECCNWLRNRLEELNVESYKEMHYHEEQATNCIVGNVVYERLADHGPKLGP
ITRNHPVVCGYFTFPFEDNLTFDQEMQLMSQTDKACHFLAHNGWVMSDDPLRNFAEPGSN
VYLRRELICWGDSVKLRYGEKPADCPYLWAHMKKYTEITAQHFAGVRLDNCHSTPLHVAE
YMLERARELKPDLYVVAELFTGSEELDNVFVTRLAITSLIREAMSAGDSHEEGRLVYRFG
GEPVGSFVQPSLRPLVPSIAHAMFLDVTHDNECPVQIRSAYDSLPSSAIVSMASCATGST
RGYDELVPHQISVVKEERFYPKWNSEAKPSSAGEVNSQSGIIAGKLALNMLHQELASKGF
SQVYVDQVDEDIVAVTRHCPSTHQSVVAVCHTAFRNPKTYQYRQEVPPMCIPGKIEEVVL
EARTVERIAGSYQKDRKSINGLPDHTLEIREHIQLHDSKIVKQDDVMCKGRSEFVQEIEF
EHLSPGSVIVFRVSLDPRSQELVGVLRRHLVQFSDHYKTGSMPDNNAPAILTTPLAAIMS
KVTLADMNVLLFRCDAEEQEDGGGCYNIPSWMSLKYGGLQGLMSVMGDIRPKNDLGHPFC
DNLRRGDWMIDYVSNRLVIKGGALGEVGKWFQAMFTYLKHIPRYLVPCYFDSIIVGAYTT
ALDIVFNKMSNFIQTGSTLVKQLALGSVQMCGVGLHPALPPLAPTLLDVPYRLNGVTNEK
EQCCVSLAAGLPHFAAGMVRCWGRDTFMALRGLMLVTGRHLEARNIILAFAGTLRYGLIP
NLLGQGTGARYNCRDAVWWWLQCIQDYCNMVPDGVNILMCPVSRMYPTNVSQPQPAGAWI
QPLYDVIHEAMTRHMQGTEFRERNAGPQIDRNMTDEGFNVEAKVNEDTGFVYGGNRFNCG
TWMDKMGESDKAHNKGIPATPRDGSAVEIVGLCKSTVRWLVDLHTHGFFPYATLTILSDG
RNISVPYEEWNRKIQENFEKMFYVSHNLQDPNEKHPDLVHKRGIYKDSYGASSPWCDYQL
RPNFAITMVVAPELFTVERAWEALEMAETKLLGPLGMKTLDPDDMKYCGVYDNTLDSENF
NVAKGFNYHQGPEWLWPVGYFLRAKLYFAKKMGPEIYDKTVYLVKNVLSRHNIHFERSSW
KGLPELTNENGQYCPFSCETQAWSIATILEVLHDL
NT seq
4608 nt
NT seq
+upstream
nt +downstream
nt
atggttcgaagcagacagaccagagtactgttcctgaatgacatggagcgactagagagg
actctgttccgactagagcaaggctttgagctccagttccggttggggcccactctgcag
gggaggcatgtgcaggtccacactaactaccctgcggagggagagaagtttgaccgggtt
aagttctggcctctgaactggataaacccaacggggagagaggatgactcggacaagtac
tgcaaactggacctgcaggtggcagggtcctaccagtattacttttgtgctgggactgaa
gagaagactggtagtggctacatagtggtggacccagtgctgcgtgtgggtgctgataac
catgttctacccctggactgtattgccattcagacatacctggccaagtgcctggggcct
ctggacgaatggcaggacaggctcagggttgccaaggagaccggttataacatgatccac
ttcaccccgctgcagaagttagggatgtctcgctcctgctattctctggccgaccaactg
gagctcaacccagagttctctactgaagggaagaactacacctggatggatgtgggcaac
ctggtggagaaactgaagaaagagtggaacatggtctgcatcactgacgtggtctacaac
catacagctgctaacagtaggtggttatgtctacaccctgagtgtggctataatctggtg
aactcgccccacctgaagccagcctgggtgctggacagggctctgtggcacctcacctgt
gacatcgcagacgggaagtacagtggccatggtgttcctgctcacatcgagaatgaacac
caactccacatgctgcgaggtgtcctctgggatgagatctaccccaggaccaagctgtgg
gagttctaccaggtgaacgtggagaaggctgtggaacagttcaggaagctgcttcaggca
ggaggcaaagcagtgagattagagaatgaggataagaagcgtctgaggatcctcccggac
ccccatggtcgacgcttcggtaacaccgtggacatgacctcagccttggagaccttcata
cccaatggcaatgagccctcatccatccaggagtgttgtaactggttgaggaacagactg
gaggagctgaatgtggagagctataaggagatgcactaccatgaggaacaggccaccaac
tgcattgtgggaaatgtagtgtacgaacgccttgcagaccacgggcctaagttgggacct
attaccaggaatcatccagtggtgtgtggatatttcaccttcccgtttgaggacaacttg
acctttgaccaggaaatgcagctgatgagccagacagacaaagcgtgtcacttcctggcc
cacaacggctgggtgatgtcagacgaccccctgaggaactttgctgagccaggctctaac
gtgtacctgaggagggagctgatctgctggggagacagtgtgaagctgcgttacggtgag
aaaccagcggactgtccctacctgtgggcccacatgaagaagtatacagagatcacagcc
caacactttgcgggcgtgcgcttggacaactgtcactccactcctctacatgtggccgag
tacatgctggagagagctcgcgagctgaagcctgacctgtatgtggtggctgagctgttc
acaggcagcgaggagctggacaatgtctttgtcactagactggccataacctccctcatc
agagaggctatgagtgcaggggacagtcatgaggagggcaggctggtctacaggtttggt
ggagagcctgtgggctctttcgtccagcccagcctcagacctctggtgccctctatcgcc
catgccatgttcctggatgttacccatgacaacgagtgccctgtccagattcgctctgcg
tacgactccctcccgagctctgctattgtctccatggccagttgtgctacaggcagtact
agaggatatgacgagctggtccctcaccagatctctgttgtgaaggaggagcgcttctat
ccaaagtggaactcagaggccaagccctcctctgcaggggaggtgaactcccagagtggt
atcatcgctgggaaactggccctcaacatgctgcaccaagaactggcctctaagggcttc
tcgcaggtctatgtggaccaggtggatgaggacatagtggcagtaaccagacattgcccc
agcacacaccagtctgtggtagctgtgtgtcacactgccttcaggaaccccaagacctat
caatatagacaggaggttccccccatgtgcatcccaggtaaaatagaggaggtggtactg
gaggccaggactgtggagaggatagctgggtcgtaccagaaagaccggaagagcatcaac
ggtctccctgaccacacattagagatcagagaacacatccagctacatgacagcaagatt
gtgaaacaggatgatgtcatgtgtaagggccgcagtgaatttgtccaggagattgaattc
gaacacctcagccctggtagtgtgatagtgttcagggtgagtctggaccccaggtcccag
gagctggtgggggttctgaggagacacctggtccagttcagtgaccattacaagacgggc
agtatgcctgacaacaacgccccagccatactcactactcctctggcagctattatgtcc
aaggtgaccctggcggacatgaacgtgttgctgttccgttgtgacgctgaagagcaggag
gacggtggaggctgctacaacatcccttcctggatgagtctcaagtacggaggcctgcaa
ggtctgatgtcggtgatgggggacattcgtcccaaaaatgacctgggacaccccttctgt
gacaacttgagacggggagattggatgatcgactacgtcagcaaccggctggtcatcaag
ggaggagcactgggcgaggtaggcaagtggttccaggccatgtttacctatctgaagcac
atccctcgctacctggtgccatgctacttcgactccatcattgttggggcttataccacc
gccttggatattgtgttcaataaaatgtcaaacttcatccagaccggttccaccctggtg
aagcagttagctctgggctcagtacagatgtgtggagttggcctgcaccccgcccttccc
cccctggcacccacgctgcttgacgtgccctaccgtctcaatggggttaccaacgagaaa
gagcagtgctgtgtgtcactggctgcaggtcttcctcattttgcggctgggatggtccgt
tgctggggccgggacactttcatggcactgcgaggtctgatgctggtgacaggaagacac
ctggaggccagaaacataatcctggcgttcgctggcaccctgaggtatggcctgatcccc
aacctgctgggacaggggactggcgcccgctataactgccgtgacgcagtatggtggtgg
ctgcagtgcatccaggactactgcaacatggtgcctgacggagtcaacatcctcatgtgc
cctgtgtcaaggatgtatcccaccaatgtgtcccagccacagcccgctggagcctggatc
cagcccctgtatgatgtcattcatgaggcgatgacgcgtcatatgcaggggacggagttc
agggagaggaacgctggaccacagatagatcgcaacatgaccgatgaagggtttaatgtt
gaggccaaggtgaatgaagacactgggtttgtctatggaggaaatcgcttcaactgtggg
acatggatggacaagatgggagagagtgacaaggctcataacaaaggaatcccagctaca
cctagggatggctctgcagtggagatagtgggtctctgtaagtccacagtgcgctggtta
gtggaccttcatacgcacggcttcttcccttacgcaaccctaaccatccttagtgatggt
cgtaacatctctgtgccctatgaagagtggaacagaaagatccaggagaactttgagaag
atgttttacgtgtctcacaaccttcaggaccccaatgagaaacacccagacctggttcac
aagagaggcatctacaaggacagctatggggcctccagtccctggtgtgactaccagctc
aggcccaactttgctatcaccatggtggtggctccggagctgttcacagtggaaagggcc
tgggaggcactagagatggcagagactaagctgctcggccccctgggaatgaagacctta
gatccagatgacatgaagtactgtggtgtctacgataatactctggatagtgagaatttc
aatgttgctaagggcttcaactaccatcaaggacctgagtggctctggccagtcggctat
ttcctaagagccaaactgtactttgccaagaagatggggccagagatatacgacaagact
gtgtacctggtgaagaatgtcctctctaggcataacatccacttcgagagatcatcttgg
aagggtctacctgagctgactaatgagaatggccagtactgtcccttcagctgtgagact
caggcctggtctatcgccaccatactggaggtcctgcatgatctgtag
DBGET
integrated database retrieval system
