Oncorhynchus kisutch (coho salmon): 116352948
Help
Entry
116352948 CDS
T09179
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2B-like
KO
K05210
glutamate receptor ionotropic, NMDA 2B
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04020
Calcium signaling pathway
oki04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
116352948
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116352948
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oki04040
]
116352948
Ion channels [BR:
oki04040
]
Ligand-gated channels
Glutamate (ionotropic)
116352948
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
116352948
NCBI-ProteinID:
XP_031683466
Ensembl:
ENSOKIG00005012113
LinkDB
All DBs
Position
LG6:76098636..76124791
Genome browser
AA seq
1286 aa
AA seq
DB search
MHPKLVIILLDKMRQWDKVGKWENGSLSMKYHVWPRFEIYSGAESREDDHLSIVTLEEAP
FVIVEDVDPLSGTCMRNTVPCRRQLQTMLAGNKTVDSGIYIKRCCKGFCIDILKKIAKHV
KFTYDLYLVTNGKHGKKINGTWNGMVGEVETKKAHMAVGSLTINKERSEVIDFSVPFIET
GISVMVSRSNGTVSPSAFLEPFSADVWVMMFVMLLLVSAIAVFVFEYLSPVGYNRCLADG
REPGGPSFTIGKAIWLLWGLVFNNSVPVQNPKGWTSKIMVSVWAFFAVIFLASYTANLAA
FMIQEEYVDQVSGLSDKKFQRPNDFSPPFRFGTVPNGSTERNIKNNYKEMHGYMIKFHQK
NVDEALYGLKTGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGKVFASTGYGIAIQKESGW
KRHVDLAILQLFGDGDMEELEAMWLTGICHHEKNEVMSSQLDVDNMAGVFYMLGAAMALS
LITFIAEHAFYWQLRFCFMGYCTGKPGFVFSISRGIYSCIHGVQIEEKSSSALDSPSVTM
NNTQSNILRLLRTAKNMASLSGVNGSPHSALDFIRRESSVYDISEHRRSLAGHSDCKPPY
MPEDNMFSDYINEVERTFGNLHLKDSNLYQDHYLHHHGGSALGLSGPPLNRPHSLGSNSS
LEGGMFDCDSLGGGVAPIFTTQPRSALTHRNMSKFDLIAGQNPPSGPGFKSGLSDLYGKF
SFKGGASSSGYIPGHDRYCGGGGREDDGNIRSDVSDISTHTVTYGNLEGNAKKRKQYRDS
LKKRPASAKSRRELDEIELGYRRKPYHTGYHHYHGHRSSSPPLLPSERKRGGGGNAGSTS
YLFRDKESVRDFYLDQFRPKDGVPQWEHVDLTDGPGGGGGGGGGNCTSLVSVDDFLKQNK
PKKSESKSGGGTSGAGLAGGDWECRNCRASGGGGKQMSMHGSGAGERGGGYGGGVSCGSS
GGGGNSRPSSATCMRCEGCKKTGNLYDISEDNNHLLEQMGGGKGGGMGAVGLSGGAQPQS
QAQRRKSAGFGKPLRRQHSCDTFVDLQKEEAVGVRGVMGDLGGGMGGVGMGGMLPPPRSV
SLKEKERYMEGVSPFAHIFERHGGSEREKERDRDPLFYGGEMAKEAGSPFGLFRGGEGLH
RRSVGERDMRDRERAMMEGGGGGTYSLSKSLYPDRVNQNPFIPTFGDDQCLLHGAKQYYM
KKQQQQQQMPPKNSRSDFRGSVGVTSFLPATATAGVMSTVAPRFPMELCLGGNLHGSTLG
LGPIQRPFNGSNGHVYEKLSSIESDV
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atgcatcccaaactggtcatcatcctactggacaagatgaggcagtgggacaaggtgggg
aagtgggagaacggctccctgtccatgaagtaccacgtctggcctcgctttgagatctac
tcaggggcagagagccgggaggacgaccacctttccatcgttacgctggaggaggctccg
tttgtcatcgtggaggacgttgaccccctcagtggcacgtgtatgaggaacactgtgccc
tgcaggagacagctccaaacaatgctagcgggaaataaaaccgtagactctgggatctat
atcaagcgctgctgtaagggattctgcatcgacatcctgaagaagatcgccaagcacgtc
aagttcacctacgacctctacctggtgaccaatggaaaacacggcaagaagatcaacggc
acctggaacggcatggtgggagaggtggagacaaaaaaggcccacatggcggtgggctcc
ctcaccatcaacaaggagaggtcagaggtaattgacttctcggtgcccttcattgagacg
ggcatcagcgtcatggtgtcccgtagcaacggcaccgtctcgccctctgccttcctcgag
cccttcagtgctgatgtgtgggtgatgatgttcgtgatgctgctgctggtgtctgcgatt
gctgtgtttgtgtttgagtacctcagccctgtgggctacaaccgctgtctggctgacggt
agagagcctggaggaccctccttcaccatcggcaaggccatctggctgctgtggggtctg
gtcttcaacaactctgtcccagtgcagaaccccaagggttggaccagtaagatcatggtg
tcggtgtgggccttcttcgctgtcatcttcctggcctcctacacagccaatctggcagcc
ttcatgatccaggaggagtatgtggaccaggtgtctggactcagcgacaagaagttccag
agacccaatgacttctcccctccgttccggtttgggacggtccctaacggcagcacggaa
aggaacatcaagaacaactacaaggagatgcatggctacatgatcaagttccaccagaag
aatgtggatgaggccctctatggtctgaagactggtaaactggacgccttcatctacgat
gcagcggtgctgaactacatggccgggagggacgagggctgtaagctggtgaccatcggc
agtgggaaggtgtttgcctccacgggctacggcatcgccatccagaaggagtctggctgg
aagagacacgtcgacctggccatccttcagctctttggagacggtgacatggaggagctg
gaggccatgtggctgacggggatctgccaccatgagaagaacgaggtgatgagcagccag
ctggacgtggacaacatggccggcgtcttctacatgctgggggcggccatggctctgtcg
ctcatcaccttcatcgccgagcacgccttctactggcaactgcgcttctgcttcatgggc
tactgcacgggcaagccaggcttcgtcttctccatcagcaggggcatctacagctgcatc
cacggggttcagatcgaagagaagagcagctcagctctcgactctccatcggtcaccatg
aacaacacccaatccaacatcctgcgtctgctccgaaccgctaagaacatggcctccctg
tccggggttaacggctcacctcacagtgccctggactttatccgccgtgagtcatccgtc
tacgacatctctgagcaccgccgcagcctggcaggtcactcggactgcaagcccccgtac
atgccggaggataacatgttcagcgactacatcaacgaggtggagaggacgttcgggaac
ctccacctgaaggacagcaacctgtaccaggaccactacctgcaccaccatggaggctct
gccctggggctcagcggcccgccacttaacagacctcacagcctgggcagcaacagctct
ctggaagggggcatgtttgactgtgacagtttagggggaggagtggcacccatcttcacc
acccagccacgctctgccctgacccacaggaacatgagtaagtttgacctgattgccggt
cagaacccaccctccgggccgggcttcaaatcgggactttcagacctgtacggaaaattc
tccttcaagggaggggcctccagctcaggttacatccccgggcacgacaggtactgtggg
ggagggggcagagaggatgacggaaacattcgttcagacgtttcagacatctccactcac
acggtcacctacgggaacctggagggcaacgctaaaaagcgtaagcagtatcgcgacagc
ctgaaaaagaggcccgcctcggccaagtcgagacgagagctggatgagattgagctgggc
taccggagaaagccctaccacacaggctaccaccactaccacggccaccgctcctcctcc
ccgcccctactgccctccgaacgcaagagaggaggagggggcaatgcagggagcacatcc
tacctgttccgtgacaaagagagtgtgagggatttctatttggaccagttccgccccaaa
gatggtgtcccccaatgggaacatgtggatctgacagacggtcctggaggggggggtgga
gggggcggggggaactgcaccagtttggtgtcagtggacgacttcctgaaacaaaataaa
cccaagaaatcagagtctaagagtgggggaggcacatcaggggcggggttggcaggagga
gactgggagtgtcgtaactgccgtgccagtggaggagggggcaagcagatgtcgatgcat
ggcagcggggcgggggagaggggaggcggatatggtggaggggttagttgtggatcctcg
gggggtggagggaacagccgtcccagctctgccacctgcatgcgctgcgagggctgcaaa
aagacaggcaacctgtacgacatcagtgaggacaacaaccacctcttggaacagatgggg
ggtgggaaaggcggaggcatgggggctgtggggttaagtggaggcgcccagcctcaatct
caagcccagcgtaggaagtctgccggctttggaaagccactccgacggcaacactcttgc
gacaccttcgtagaccttcagaaagaggaggcagtcggagtcaggggggtcatgggggat
ctaggagggggcatggggggtgtaggaatgggcgggatgttgcctccccccagaagtgtt
agcttaaaagagaaggagcgctatatggagggtgttagcccctttgcccacatatttgag
aggcatggaggctcagagagggagaaggagcgagacagagaccccctgttctatggtggt
gagatggccaaagaagcagggtcgccattcggcttgttccgaggtggtgagggcctgcac
cgccgctcagtgggggaaagggacatgagggacagagaaagagccatgatggagggcggt
ggaggaggaacctactccttatccaaatctctctacccggatagggtcaaccaaaacccc
tttattccaacctttggtgacgaccagtgtctcttgcatggcgccaaacaatactacatg
aaaaagcaacagcagcagcagcagatgccccccaaaaacagccgaagtgacttccggggc
tctgtgggtgtgacgtctttcttgccagcgactgccactgctggggtcatgtccaccgtg
gcccccaggttccctatggagctgtgtctgggagggaacctccacggctccacgctgggt
ttggggccaatacagcgcccgttcaatggcagcaacgggcacgtgtacgagaaactctcc
agcatagagtcagacgtgtga
DBGET
integrated database retrieval system
