Oryzias latipes (Japanese medaka): 101155097
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Entry
101155097 CDS
T02443
Symbol
trdmt1
Name
(RefSeq) tRNA (cytosine(38)-C(5))-methyltransferase isoform X1
KO
K15336
tRNA (cytosine38-C5)-methyltransferase [EC:
2.1.1.204
]
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ola03016
]
101155097 (trdmt1)
Enzymes [BR:
ola01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.204 tRNA (cytosine38-C5)-methyltransferase
101155097 (trdmt1)
Transfer RNA biogenesis [BR:
ola03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
101155097 (trdmt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Motif
Other DBs
NCBI-GeneID:
101155097
NCBI-ProteinID:
XP_004086901
UniProt:
A0A3B3I1L5
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Position
20:1139891..1156311
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AA seq
410 aa
AA seq
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METVRVLELYSGIGGMHYALKESGVPAEVVAAVDINTMANQIYKHNFPDTPLWNKSIEGL
TLEDFAGLSVDMVMMSPPCQPFTRIGLQGDVSDPRTKSFLHILHLLPRLHRPPRFILLEN
VKGFETSAARDRLINTLTECGYVFQEIMASPTSVGIPNSRLRYFLIARRSAENMNIHTGS
KVWDVCAQPAEDDLALVSKAACSGTTPPEEKASHGLVLYKLETEMQLQRKTTQNSNPDVK
QIQDFLEAGSQVNVEEYLLPPKTLLRYSLLLDIVQPTSRRSVCFTKGYGRYVEGTGSVLQ
GCMDTEVQSVFTDLELLSEEDRLQRLMSLRLRYFTPREVANLMCFPPCFSFPEHISTIQR
YRVLGNSLNVLLVAKLVQLLFSIQPTHSCENSSSAAPQPPEPRPGSAVDT
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggagaccgtgcgggtgttggagctgtacagcggcataggagggatgcattacgctttg
aaagagagtggggttcctgctgaggtggtggctgctgttgacatcaacaccatggccaac
cagatctacaagcacaacttccctgacacgccgctctggaacaagtccattgagggccta
accctggaggactttgctggcctgtctgttgacatggtgatgatgagcccgccctgccag
cctttcaccaggatcggactgcagggggatgtcagcgatcccagaaccaagagctttctc
cacatcctacatcttctgcccaggctgcacaggccacctcgctttattctgctggagaac
gtgaagggcttcgagacatccgctgccagagatcgactgataaacactctgaccgagtgt
ggatacgttttccaagagattatggcctctcccacaagtgttggaatcccaaattctaga
ctacgatactttctgattgctcgtcgttcagcagaaaacatgaacatccatacgggttca
aaggtgtgggacgtgtgtgcacagccagctgaggacgacttggccttggtgtcaaaggca
gcctgttctggtaccactccaccagaggagaaggcgagccatgggctggttctgtataaa
ctggagacggagatgcagcttcagaggaagacgactcagaacagcaatccagacgtgaag
cagatacaagactttttggaagcgggctctcaggtgaatgtggaggagtacttacttcct
cctaaaacgttactgaggtacagtctgctgttggacatcgttcagcccacatccagacgt
tctgtctgcttcactaaaggatatgggagatacgtggagggaacaggctcagtgctgcag
ggctgcatggacactgaggtccagagtgttttcacagacctggagctgctctctgaggaa
gatcgactccagcggctgatgagtctccgactccgttatttcactcccagagaagtggcc
aacctcatgtgctttcctccctgcttctcatttccagagcacatctccaccatccagcgg
taccgcgtgttgggaaacagtctcaacgttctactggtggccaagctggtgcagttgctg
ttttccatacagccaactcacagctgtgagaactcaagcagtgctgctccacaaccccca
gaaccaaggccaggctcagctgtggacacttaa
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