Oryzias latipes (Japanese medaka): 101156035
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Entry
101156035 CDS
T02443
Symbol
trmt2b
Name
(RefSeq) tRNA (uracil(54)-C(5))-methyltransferase homolog isoform X1
KO
K15331
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ola03016
]
101156035 (trmt2b)
Enzymes [BR:
ola01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
101156035 (trmt2b)
Transfer RNA biogenesis [BR:
ola03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
101156035 (trmt2b)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
PrmA
Methyltransf_4
Methyltransf_15
MTS
Ubie_methyltran
Methyltransf_11
N6_N4_Mtase
Motif
Other DBs
NCBI-GeneID:
101156035
NCBI-ProteinID:
XP_004077162
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All DBs
Position
15:21542617..21546304
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AA seq
491 aa
AA seq
DB search
MGLPGFRLVKSVKISITFALTKPYFQFSTKATTVDKQDKTPATKRRRKSQKNHLWSDNLS
WEERLADAVTPLWRLSYDEQLELKQKHQETTLSQLVGHLSGDPKSSSPVKNKLTFPLLPI
LPSPVRDGYRNKSTFSVNRGADGNTKTVGFYLGTGKQGNIVCVNGDHLLNMPEKHKLVAR
CYQDFIRQSPLDPCLLFHSGGHWREVTVRTNATGHTMAIVYFHPQTLTPEEVAVHQTDLV
DYFMRGPGSVCQLDSLFFQESSMTRCTHEKSPYQLLYGQPHIYETVLGFKFRISPDAFFQ
VNQGAAEVLYGTLRDLISANTEKGEKQGKPTDTLLDVCCGTGAIGITTSPRVEKVIGIEL
IEQAVEDAVHNAALNNVLNCKFISGKAEAVLPGLIVDLSCTGGGLTAVVNPARAGLHYRV
VRALRNQPNIRRLVYVSCKPDGEAMRNFRELCCPPDPQKKLTGEAFSPILAIPVDMFPHT
PHCELVLLFER
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgggtcttccgggcttcaggttagtcaaatctgtcaaaataagcatcacgtttgcttta
acgaagccatattttcagttttctacaaaagccactactgtagataagcaggataaaaca
ccagcaacgaaacggaggagaaaaagtcagaagaatcatctctggtccgacaatctgtcc
tgggaggaaaggctggctgatgcggtcactcctctgtggaggctgagttatgatgagcag
cttgagctgaagcaaaagcaccaggaaacgaccctgtctcagcttgtgggacatctttca
ggtgaccccaagtcctcatcacctgttaaaaataaactcacctttcctctcctgcccatt
ctgccatccccagtaagagatggctaccgcaataagtcgactttttctgtcaacagagga
gcagatggaaatacaaagactgttggattttatttgggcactggaaaacagggaaacata
gtatgtgtaaatggagatcaccttctgaacatgccagagaagcacaaacttgttgccaga
tgctaccaggacttcatccgccagtccccacttgacccctgtttgctgttccactctgga
ggtcactggagagaggtgacggttaggacaaatgctacgggacacaccatggctattgtt
tattttcaccctcaaacgctcactccagaggaagtggctgttcatcagaccgacctggtg
gattactttatgcgcggtcctggatcagtctgtcagctggactcgctattcttccaagag
agctccatgactcgctgcacccatgagaaatcgccgtaccagctcctttatggccagcct
cacatatacgagacggttctgggtttcaagttccgcatttctccagatgcctttttccag
gtgaaccagggagctgctgaggttctttatggcacattgagggacctcatttccgcaaac
actgagaaaggagagaaacaaggaaaacctactgacactcttcttgatgtgtgctgtggg
actggtgccattggtatcactacatccccacgggtggagaaagtcatcggaatagaactc
atagagcaggcggtggaagacgctgttcataatgccgctcttaataatgtgctgaactgc
aagtttatttctgggaaagcagaggcggtgcttcctggtctcatagtggacttaagctgc
acaggtggaggccttacagccgtggtgaacccagctcgagctggccttcactacagagtg
gtcagagctctccgaaaccagcctaacatccgcagactggtctacgtctcctgtaaaccc
gatggggaagccatgaggaacttcagggaactttgttgccctcctgatccacagaaaaaa
ctcacaggagaggcattttccccaatactggctattcctgtggacatgttcccacacact
cctcactgtgaactagtgctgcttttcgaacgctag
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