Oryzias latipes (Japanese medaka): 101157164
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Entry
101157164 CDS
T02443
Symbol
polr3a
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1 isoform X4
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03020
RNA polymerase
ola04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
101157164 (polr3a)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
101157164 (polr3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ola03021
]
101157164 (polr3a)
Enzymes [BR:
ola01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
101157164 (polr3a)
Transcription machinery [BR:
ola03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
101157164 (polr3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
101157164
NCBI-ProteinID:
XP_004080458
UniProt:
H2LYL3
LinkDB
All DBs
Position
19:10742465..10762242
Genome browser
AA seq
1390 aa
AA seq
DB search
MVKEQFRETDVAKKISHICFGMKSAEQMRQQAHIQVVSKNLYSQDTKHTPLPHGVLDHRM
GTSEKDRPCLTCGKNLADCLGHYGYLDLELPCFHVGYFKAVIGILQMICKTCSSIMLTKE
EKLQFLDLLKRPNLAYLQKRGLKKKISEKCRKRTVCLNCSAFNGTVKKCGLLKIIHEKYK
TTKKVVDPFVSEFMQSFDTAIEHNKLIEPLLNRAQENLNPLVVLNLFRRIPDEDIPLLLM
NPEAGKPADLIITRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRMSG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPVHVAKILTYPEMVNKANLELMRKLVRNGPDVHPGANF
IQNRRNQIKRFLKYGNREKIAQELRFGDIVERHMIDGDVVLFNRQPSLHKLSIMAHIARV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALILMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTLKDTFFDRSKACQIVASILVGKDEKVRISLPHPAILKPMALWTGKQI
FSMILRPSKDCPVKANLRTKGKQYCGKGEDLCYNDSFVVIHNSELMCGSMDKGTLGSGSK
NNIFYILLRDWGQLEAANAMSRLARLAPVYLSNRGFSIGIGDVTPGHGLLKAKQDLLDDG
YKKCDEYIEALQTGKLQQQPGCSAEETLEALILRELSVIRDRAGSACLRELDKSNSPLIM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVADSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSMGDIIQF
IYGGDGLDPAAMEGKDEPLEFKRVLDNIRAVYTCPDEPALSQNKLVLTSDAIMKRADFMC
CRDSFLEEIKKFIRSMSERIKKTRDKYGINDNGTSEPKVLYQLDRITPTQLEKFLETCRD
KYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINASKNI
STPIITAQLDVEDDADFARLVKGRIEKTLLGEISEYIEEVFLPDDCFILVKLSLERIRLL
RLEVNAETVRYSICMSKLRVKPGDIAVHGEAVVCVSPRENNKSSMYYVLQSLKEDLPKVV
VQGIPEVARAVIHIDEQSGKNKYKLLVEGDNMRAVMATHGVNGSRTTSNNTYEVEKTLGI
EAARSTIINEIQYTMVNHGMSIDRRHVMLLADLMSYKGEILGITRFGLAKMKESVLMLAS
FEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKADKDPTPVTRPLLFD
HKDFHIPLFT
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggagcaattccgagagacagacgtggctaaaaaaataagccacatctgcttt
gggatgaaatctgctgagcagatgcggcagcaggcccacatccaggtggtcagcaagaat
ctgtacagccaggacaccaaacacaccccactgccccatggagtactggatcaccgcatg
ggaacaagtgagaaagaccgaccatgtttgacttgtgggaagaatctggcagattgtttg
gggcattatgggtatttggacctagaactgccttgttttcatgttggctacttcaaagct
gttataggaatactacagatgatttgcaaaacctgctccagcataatgctgaccaaagag
gaaaaactccagtttctggatctcttgaaacggcccaacctggcttatctccagaagcga
ggcttgaaaaagaagatttccgaaaaatgccgcaaaaggacagtttgtctgaattgttct
gcttttaatggaactgtaaaaaagtgtggcctgttaaagatcattcacgaaaaatataaa
acgaccaagaaagtggtggatccatttgtgtcagagttcatgcagtccttcgatacagcc
atcgaacacaacaaactgatcgaaccgctgttgaaccgagcacaggaaaacctgaatccc
ctggtggtcctgaacctgttcaggaggattccggatgaagacatccctctgctgctgatg
aacccggaagcaggcaaacccgcagacctcatcatcacccgcctcctcgttcctcctctc
tgcatccgaccgtctgtggtcagcgacctgaagtcgggcaccaatgaagatgacctcacc
atgaagctgacggagatcatcttcctcaacgatgtcatcaaaaagcatcgcatgagtgga
gcaaaaacccagatgatcatggaggactgggacttcctccagctgcaatgtgcactttac
ataaacagtgaactttccggcatcccgctcaatatggcaccgaaaaaatggacaagaggt
tttgtgcaaagactcaagggaaagcaaggccgattcagaggaaacctctcagggaaaaga
gtggacttctcaggaagaacggttatttctccggaccccaacctgaggatcgatgaagtg
gccgttcccgtccacgtggctaaaatcctgacgtatccagagatggtaaacaaagccaac
ctggaactgatgagaaagctggtgcggaacggccccgatgttcaccccggagccaacttt
atccagaaccgccgcaatcagattaaacggttcttgaaatatggaaaccgggaaaaaata
gctcaggagttgaggtttggtgacattgtggagagacacatgatagatggagacgtcgtc
ctcttcaatcggcagccatctttgcacaaacttagcatcatggcccacatagccagagtc
aaaccacacagaacgtttcgcttcaacgagtgcgtttgtactccctacaatgctgatttt
gacggagatgaaatgaatctccatcttcctcaaacggaagaagccaaagcagaggccctg
atcctgatggggaccaaagctaatcttgtcactcccagaaacggcgaacctctcattgct
gctattcaggactttttgacaggtgcttacctgttgacgttgaaggacaccttctttgat
cgatcaaaagcctgccagattgtggcatcaatccttgtgggcaaagatgaaaaagtcaga
atctctttacctcacccagcgattctaaagccgatggctctgtggacgggcaaacagatc
ttcagtatgatcctgaggccaagtaaggattgtccagtgaaggccaacctgcggacaaaa
ggcaaacagtactgtgggaagggagaggatctgtgttacaacgactcatttgtggtgatt
cacaacagtgagctgatgtgtggcagcatggacaaaggcaccttgggttcaggctccaag
aacaacattttctacatcttgctgagggactggggacagctggaggccgcaaacgccatg
tcgcgcctggcgaggcttgctccagtgtatctctcaaacagaggattctccattggaatc
ggcgatgtgactccaggccacggtctgctgaaggccaaacaggacctgctcgatgacggc
tacaagaagtgtgatgaatacatcgaagctttgcagacgggcaaattacagcagcagcca
ggctgctcagcagaggagacgctggaggctctcatcttgagggagctttccgtcatcaga
gaccgagcaggcagtgcctgcctcagggagcttgacaagagcaacagtccacttattatg
gctctttgtggatccaaaggttcctttattaacatttctcagatgattgcctgtgtgggc
cagcaggccataagtggctctcgagtccccgacggctttgagaaccgttctctgcctcac
tttgagaaacactccaaactgcctgctgccaaaggctttgtggctgatagtttctattcc
ggtctgactcccactgagttcttcttccacaccatggcgggccgagagggtctggtggat
actgctgtgaaaacggcagagaccggatacatgcagaggcgtctggtgaagtccctagaa
gatttgtgctcgcagtatgacctgacggtgcgcagctcaatgggtgacatcatccagttc
atatacggcggcgatggtctcgacccggctgccatggagggaaaagacgagccgctggag
ttcaagagagtactggacaacattcgggcggtctacacgtgcccggatgagcccgcgctc
agtcaaaacaagctggtcctcacctcagacgccatcatgaaaagagccgacttcatgtgc
tgcagagacagcttcttggaggagatcaaaaaattcattaggagcatgtcagaaagaatc
aagaagaccagagacaagtacggcatcaacgataatggaacaagcgagcctaaggttctg
tatcagctggaccggatcacaccgacacagctggagaagtttcttgaaacctgcagagac
aagtacatgagagcccagatggagccgggctcagcagtgggggctctgtgtgctcagagc
atcggggagcccggcactcagatgaccctgaaaacctttcactttgccggcgtggcgtcg
atgaacatcactctgggggtgcctcgcatcaaagagatcatcaacgcttccaagaacatc
agcacccctataatcactgctcaattggatgttgaagacgacgctgactttgcaaggctg
gtgaaagggaggattgagaaaactcttctcggagaaatttccgaatacattgaagaagtt
ttccttccagatgactgcttcatcctggtgaaattgtctctagagaggatacgactgcta
agattggaggtgaatgccgaaacggtgcgttattccatctgcatgtccaagctgcgcgtc
aagcccggagacattgctgtgcacggcgaggcggtggtttgcgtctcgccacgggaaaac
aacaaaagctccatgtactatgtgctgcagtcgttaaaagaagatcttcctaaggttgtg
gttcaaggaatacccgaggtcgcccgagcggtcattcacatcgacgaacagagtggaaag
aacaaatacaaactcctggtagaaggggacaacatgagagctgtcatggccactcatgga
gtgaatggaagcaggactacttcaaacaacacatacgaggtggagaagactttaggcatt
gaggctgcgcgatccactatcatcaatgagattcagtataccatggtaaaccatggaatg
agcatcgaccggcggcacgtcatgcttctcgcagatttgatgtcttataagggggaaatt
ttaggaattaccagatttggattggctaagatgaaggagagcgtcctcatgctggcctcc
tttgagaaaaccgccgaccatctgtttgatgctgcctactttggacagaaggactctgtc
tgcggagtgtctgagtgcatcatcatgggaatcccaatgaacattggaacaggactcttc
aagctgctgcacaaagctgacaaggatcccactccagtcacaaggccacttctgtttgac
cataaggacttccatatacctctgttcacatag
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integrated database retrieval system
