Oryzias latipes (Japanese medaka): 101158567
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Entry
101158567 CDS
T02443
Symbol
hmgcl
Name
(RefSeq) hydroxymethylglutaryl-CoA lyase, mitochondrial
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola00280
Valine, leucine and isoleucine degradation
ola00650
Butanoate metabolism
ola01100
Metabolic pathways
ola04146
Peroxisome
Module
ola_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
101158567 (hmgcl)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
101158567 (hmgcl)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
101158567 (hmgcl)
Enzymes [BR:
ola01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
101158567 (hmgcl)
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GFIT
Motif
Pfam:
HMGL-like
TGT
Motif
Other DBs
NCBI-GeneID:
101158567
NCBI-ProteinID:
XP_004082429
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Position
22:16771724..16776565
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AA seq
337 aa
AA seq
DB search
MAAVVRLLNRGILSSAMGQHYLALSTVAKVKATGLKAGHALPEKVKIVEVGPRDGLQNEK
SIVPTEAKIHLIDMLSESGLQVIEATSFVSPKWVPQMADQVEVMKGIQRKPGVTYPVLTP
NLKGFQAAVKAGASEVAIFGAASELFSKKNINCSVDESLQRFDEVMRAAKEAAVPVRGYV
SCVAGCPYEGKVAPEKVAHVAKRLYAMGCYEISLGDTIGVGTPGSMVDMLEAVTREVPVS
ALAVHCHDTYGQALANILVALQMGISVVDSSVAGLGGCPYAQGASGNVATEDVVYMLHGL
GIQTGVDLTKLMDAGAFICRTLSRKSSSKVAQATCKL
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgtggtcaggctgctgaacagagggattttaagctcagccatgggtcaacac
tacctggcgttgagcaccgtagcgaaagttaaagcgactggtttgaaagcaggccacgcg
cttccagagaaagtgaagatcgtggaggtgggacccagagatggacttcaaaacgagaag
agcatcgtcccaacagaggctaaaattcatttgattgacatgctgtcagagtcaggcctg
caagtcatcgaggccaccagctttgtttctcctaagtgggttccccagatggcagaccag
gtggaggtgatgaaaggaattcaaaggaaaccaggagtgacctatccggtcctcacgccc
aatctcaagggtttccaggctgctgtaaaggctggagcatccgaagtcgccatatttggt
gctgcatctgagctgttcagcaagaagaacataaactgctcagtggatgagagtttacaa
cgctttgacgaagtcatgagagcagcgaaggaggctgctgtgccagttagaggttatgtc
tcctgtgtcgccggatgcccatatgaaggcaaggtggcacctgagaaagttgcacatgtc
gccaagcgtctgtacgccatgggctgctatgagatctccctgggcgatactataggggtg
gggactcctggtagcatggttgacatgcttgaagctgtgaccagagaggtgccagtcagt
gctctggcggtgcactgccatgacacgtacggtcaggccttggctaacatccttgtcgct
ttgcagatggggatcagtgtggtggactcgtctgtagcaggactggggggctgtccttac
gctcagggcgcctctggaaacgtagcgaccgaagacgtcgtttatatgctgcatggactt
ggaatacagacgggagtggacctcaccaagctgatggatgctggagctttcatctgccgg
accctcagcaggaagagcagctccaaagtggcacaagctacctgcaaactgtag
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