Oryzias latipes (Japanese medaka): 101169801
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Entry
101169801 CDS
T02443
Symbol
hlcs
Name
(RefSeq) biotin--protein ligase
KO
K01942
biotin---protein ligase [EC:
6.3.4.9
6.3.4.10
6.3.4.11
6.3.4.15
]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola00780
Biotin metabolism
ola01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
101169801 (hlcs)
Enzymes [BR:
ola01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.9 biotin---[methylmalonyl-CoA-carboxytransferase] ligase
101169801 (hlcs)
6.3.4.10 biotin---[propionyl-CoA-carboxylase (ATP-hydrolysing)] ligase
101169801 (hlcs)
6.3.4.11 biotin---[methylcrotonoyl-CoA-carboxylase] ligase
101169801 (hlcs)
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
101169801 (hlcs)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPL_LplA_LipB
BPL_N
Motif
Other DBs
NCBI-GeneID:
101169801
NCBI-ProteinID:
XP_004076502
UniProt:
H2LL84
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Position
14:12759960..12789307
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AA seq
916 aa
AA seq
DB search
MLITLCYVYMWVRFHKCYSMLIRNSLFRLSSSSSRFCFSFCPSSVSEPASVPAPPSGPHA
AAPRVIAEDNVFLQLGDKAVYVTEPQVCDDLSKWTVLLGSSLVCGPQIDNISFIIEAAGP
RVGLLSPPTTNKKVLKWSDCCLPLACSPDQPFRAVAQASIDDFTRLGVAFIEGRLQLDDG
LVPLKIVPVLLQARTLSKLLKDQQQQSANSSATKTSVPETLCHHLTVEPQQLQGRKGSLF
LLPEVRRMLEERRGSEPLPSSQVLGPVNNLDESCLRNHHHMEGHAHHLHLSSCNECLELE
NSTILSVKYASAENIPDLPDDGSVDLNSVDEGLDELEHDAKGFFSQGKTLPNVLVYTGGS
QERYQAILKVLSECINVENSIIYPLQPQQALSDPWLENTRLLVLADEGPLTPELQTRFLI
YLNQGGKVLGVGSALCPAGLRLEARDGCHMQVRRLTFTREDSTELEVSILASGKVYIRDP
LGGGEVELWGELKSDAPHPRDMVIVRVTHGEDGGEAVLSQVLFDVTPESQNLDRKGFDEL
KLGNKLRHEILTEILSSLGLNCEPNRTLSESPVHLLATSKEARTSFMKWLQTKSNQNAEF
KISKTSFRLVSSSEVKEGPVSAEGSLALITDSTGSQEWPHFSFETYRKHLKSSLLGNTVL
YAEVTTSTMDLLEGMTLHSPKDVGLIAIAARQIQGRGRGGNAWLSPLGCAMFTLQVQVEL
SSKLGQRIPFLQHLAALAVVEAVCTLPGYQDIDLRVKWPNDIYYSNLLKLGGVLVTSTVL
GSTFYVLIGCGINVTNSNPTVCINDLIQQYNRQNGCSLEPLSCSLLIARTVNCLETLIGR
FQQEGPDGVLPIYYKRWLHSGTHVRLWSDEGPQMEVVSLDDNGFLQVYSQSQGLVSLEPD
GNSFDMLRNLVVIKRR
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgctgataacgctgtgctacgtctacatgtgggtgcgcttccataagtgctactcgatg
ctgatccgcaacagcctgttcagactgagtagcagcagcagccggttttgcttcagtttc
tgcccgagttcagtgtctgagcctgcgtcggtaccagcaccgccctctggaccgcatgca
gccgctccccgagtcatcgccgaggacaacgtcttcctccagctcggagacaaggccgtt
tatgttactgagccccaggtgtgtgacgacctgagcaagtggaccgttcttctaggatcc
tctctggtttgtggtccacaaatagataacatttccttcatcatagaagctgcagggccc
agagtgggacttctttctcctcccacaaccaataagaaagtgctgaagtggtctgactgc
tgcctccctctggcctgcagccctgaccagccgttcagggcggtcgctcaggccagcata
gatgacttcactcgtcttggggtggcgttcattgaaggtcgactgcagctggacgatgga
ctcgtgcctttgaagatagtcccggttcttcttcaagctcgtactctaagcaaactgctg
aaggatcagcaacagcagagcgcaaactcctctgcgaccaaaacatccgtccccgaaacc
ttgtgtcatcacctgaccgttgaaccgcaacagcttcagggccgcaaaggcagcctgttt
ctcctcccggaggtgaggaggatgctggaggagcggcgcgggtcagagccgctccccagc
agccaagtgttgggcccggtcaataacctggatgaaagctgcttgaggaaccatcaccac
atggagggccacgcccatcacctccatctttccagctgcaacgagtgtttggaactagag
aacagcaccatcctgtcggtgaagtacgcgtcggccgaaaacatccccgacctcccggat
gatggatcagtggatctgaacagtgtggatgagggtctggacgaacttgaacatgacgcc
aaagggtttttcagtcaaggcaagaccctcccaaatgttctggtgtacaccggtggcagt
caggagcgctatcaggccatcctcaaggttttatcagagtgcatcaatgttgaaaacagc
atcatctatcctctccagccgcagcaggcactgagcgacccctggctggagaacaccagg
ctcctggtgctggcagatgaggggcccctaacccctgagcttcagacccgctttctcatc
tacctaaaccagggcggtaaggtcttgggggtgggctccgccctctgcccagcaggtctg
cgtttggaagccagggacggttgccacatgcaagtcaggaggctgaccttcaccagggaa
gacagcacagagctggaagtgagcattttggcgagcgggaaggtctacatacgggaccct
ctgggagggggagaggtggagctctggggggagctgaaaagtgacgcccctcatccgagg
gacatggtcatcgttcgggtgacccacggagaggacggaggggaagctgttctttctcag
gtcctctttgacgtcacaccagagtctcagaatttggaccgaaaaggcttcgatgaactg
aagctcggcaacaagctgcggcacgaaatcttgactgagatcctctcctctctggggctc
aactgcgaaccaaaccggactttatccgaaagcccggtccacctgctcgccacctctaag
gaggccagaaccagcttcatgaagtggctgcagacaaagtccaatcaaaatgcagagttc
aagatatccaagacgtctttccggctagtgtcttcctctgaagttaaggaaggtcccgta
tcggctgaaggctctttggccctcatcaccgactccacggggtcgcaggagtggccacac
tttagttttgagacctacagaaaacacctgaagagcagccttctaggaaacaccgtgctg
tatgcagaggtcaccacgtctaccatggatctgctggaaggcatgactctacactctcca
aaggatgttggtttaatagcgatagctgctcgtcagatccagggtagaggtcggggaggg
aacgcctggctcagccctctgggttgcgccatgttcacgcttcaggtccaagtggagttg
agctccaaactgggacagagaattcccttcctgcagcatctggctgctttagctgtggtg
gaggctgtttgcactcttcctggataccaggacatagacttgagagtgaagtggcccaac
gacatctattacagtaacttgctgaaactcggtggggttctggtgacttccactgttctg
ggatcaactttttatgtcctcataggctgtggcatcaacgtaaccaacagcaacccgacg
gtgtgcatcaatgacctgatccagcagtacaacagacagaacggctgcagcctggagcct
ctcagctgctccttactaatcgctcgcaccgtaaactgcctggaaacgctcatcggccgc
tttcagcaggaaggtccagacggcgttctgcccatctactataagagatggctgcacagt
ggaactcatgtgcgtctctggagcgatgaaggaccgcagatggaggtggtgagtctggat
gacaacggcttcctgcaggtctacagtcaaagccagggtttggtctccttggagcctgat
gggaactcgtttgacatgctgaggaacctagtggtcatcaagcggcgctaa
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