Oryzias latipes (Japanese medaka): 101170061
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Entry
101170061 CDS
T02443
Name
(RefSeq) aryl hydrocarbon receptor-like isoform X2
KO
K09093
aryl hydrocarbon receptor
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ola03000
]
101170061
Transcription factors [BR:
ola03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
101170061
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Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS
HLH
PAS_9
PAS_4
Motif
Other DBs
NCBI-GeneID:
101170061
NCBI-ProteinID:
XP_011488315
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Position
21:27987628..28028477
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AA seq
857 aa
AA seq
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MGVQQTSEAARKKIPDAGEVVKSNPSKRHRDRLNGELDRLMDLLPFPEEVRSRLDKLSVL
RLSVGYLRVKSYFKATMKSRNGGRLALGVNGQNGSSLDGGGLSERELLLQSLDGFVMVVT
SDGLVFYVSPTIKDYLGFNQSDVVHQSVFELIHTDDRATFREQLHFALNPPPVAADEQIA
QGHGATVMYNPDQLPPENSSFLERSFVCRFRCLLDNSSGFLALKFQGRLKYLHGQNLQVE
SGGCTRPQLALFAIAMPIQPPSIVEIRAKMLLFKTKHKLDFTPTGVDSRGKIILGYSETE
LCMKGSGYQFIHAADMMYCADNHIRMIKTGESGLTVFRLLSKSKGWLWVKSNAKLTYIGG
RPEFIIAYQQALTNAEGEEYLRQRRLQLPFSCTTGEAILYNTGPTVDVMQFQFDKIFGDS
NMEKDVLPGSLLDSFLQQDEVIYAQRVEPPLPVDQVFMDSHPLLSIASDPRQGGDAPTAE
TPEVKEEQQSILAVVDSLERLAQTGEFEEVLEQLQADDTAEWERALKRFNVGVDLQRTSG
DILTEDIFDYIDSVFQKGEEFLSENPPSCLADSFPASELCEPLPFMAFSAGNGLPPPEQA
PQERPLPAAADGLPPLQQLQLQDIFALSEGLPELAIPDISADISALQNCQQAPVRPAGRP
NVGSVRVQPPDPLQSVVVTANRPQLLPHGDVPSMNFSSPNASTAPAGFPAPMQKQAAISD
PLQPWTQMLPYSGTLQNGHESAALFHGSERQTFQQAAFWQTAPPGSCMMEPRFSSSPSGG
DVPTHSESPQGPCRYRWRGREVGPSAVSKEGAAIHPLTVPPGAELAHNNKHYLNGMAQTK
SDSLFGGPALDVTAYLE
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgggggtccagcagacgtctgaggctgcccgaaagaagatcccggatgccggggaggtg
gttaagtccaacccctccaagcgccaccgggaccggctgaatggggagctcgaccggctc
atggacctcctgccctttccagaggaggtgcgctcccggctggacaagctgtcggtcctc
cgcctcagcgtgggatacctgcgggtcaagagctacttcaaagccaccatgaagagcaga
aacggcgggcgcctcgcgctcggagtgaacgggcagaacgggagcagtctggacggcggc
ggcttgtctgaaagggagctgttgctgcagagcctggacggctttgtgatggtggtcacc
tcggacgggttggtgttttacgtctcccccactatcaaggactacctgggcttcaatcag
tcagacgtggtccaccagagcgtgttcgagctcatccacaccgatgaccgcgccacgttc
agagagcagctccacttcgctctgaacccacctccggtcgccgccgacgagcagatcgca
cagggtcacggcgccaccgtcatgtacaacccggaccagcttcctccagagaactcgtct
ttcctggagaggagctttgtttgtcgcttccgctgcctcctggacaactcctccggcttc
ctggctctgaagtttcagggacggctgaagtatctccacggtcagaacctccaggtggaa
agcggcggctgtacccgacctcagctggctctgttcgccatcgccatgcccatccagcct
ccgtccatcgtggagatccgagccaaaatgctcctctttaagaccaaacacaagctggac
ttcacgcccacgggcgtcgacagcagggggaagattattctggggtattcagagactgaa
ctgtgcatgaaaggctccggctaccagttcatccacgccgcggatatgatgtactgcgcc
gacaaccacatccgcatgatcaaaaccggcgagagcggactgacggtgttcaggctcctc
agcaagtccaaaggctggctgtgggtgaagtccaacgccaagctgacctacattggagga
aggccggagttcatcatcgcgtaccagcaggccttgacgaacgccgagggggaggagtac
ctgcgtcagcggcggctgcagctgcccttcagctgcaccaccggggaggccatcctctac
aacacgggtcccaccgtggacgtcatgcagttccagttcgacaaaatcttcggcgacagc
aacatggagaaggacgtgctgccgggctccctgctggacagcttcctgcagcaggacgag
gtcatctacgcccagagggtggagccgccgctgcccgtcgaccaggtcttcatggacagc
cacccgctgctcagcatcgccagcgaccctcgccagggaggcgacgcccccacggcggag
acgccggaggtgaaggaggagcagcagtccatcctggcggtggtggacagcctggagcgg
ctggcgcaaaccggcgagtttgaggaggttctggagcagttgcaggcggacgacacggcg
gagtgggagcgcgcgctgaagaggttcaacgtgggagtggatctgcagagaacgtccggc
gacatcctcaccgaggacatcttcgattacatcgactcggtgttccagaagggggaggag
tttctgagcgagaaccctcccagctgcctggcggactccttccccgcctcagagctgtgc
gagccactgccgtttatggcgttctctgcggggaacggcctccctccccccgagcaggcc
ccccaggagcgcccgctgcccgcagctgccgacggcctgccgccgctgcagcagctgcag
ctgcaggacatcttcgcgctgtcagaggggctgccggagctcgccattcccgacatctct
gccgacatctcggctctgcagaactgccagcaggcgccggtgaggccggcgggtcgtccg
aacgtcggttctgttcgagtccagccgccggacccgctgcagtcggtcgtggtgacggca
aacaggccgcagctgctcccgcacggcgacgttccctccatgaacttcagctctccgaac
gcatcgacggctccggcgggttttccggcaccgatgcagaaacaagccgccatcagcgac
ccgttacagccgtggactcagatgctgccgtacagcggcacactgcagaacggacacgag
agcgcggccctgttccacggctcagaaagacaaacattccaacaggcggcgttttggcag
acggcgccgcccggtagctgcatgatggaaccgcgcttctcctccagcccatcagggggc
gacgtcccgactcacagcgaatcccctcaaggtccctgccgctaccggtggagaggccgc
gaggtggggccgtccgccgtcagcaaggagggcgccgccatccaccccctgacggtgcca
cccggtgccgaactcgcacacaacaataagcactacctgaacggcatggcgcagacaaag
agcgacagcctctttggtggccctgctctggatgtcactgcatacctggagtag
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