Oryzias latipes (Japanese medaka): 101173552
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Entry
101173552 CDS
T02443
Symbol
grin2b
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2B
KO
K05210
glutamate receptor ionotropic, NMDA 2B
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04020
Calcium signaling pathway
ola04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
101173552 (grin2b)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
101173552 (grin2b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ola04040
]
101173552 (grin2b)
Ion channels [BR:
ola04040
]
Ligand-gated channels
Glutamate (ionotropic)
101173552 (grin2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
101173552
NCBI-ProteinID:
XP_004071999
UniProt:
A0A3B3H4B7
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All DBs
Position
8:20098970..20256114
Genome browser
AA seq
1703 aa
AA seq
DB search
MSLWLAKLKVLLPHCRTMPVSICSSSPTQEQERARFTHPPMSPYLHPHTSAPRCLLLIFL
LLCLLHLPPACQSRREKGGGGGGGHYIPIPQPPPHHMALPNILRGLSIAVVLVGNSSEMA
LAGAREKEDFLHMAPNVELLTMNETDPKSIIKSICDLMTEHWLQGVVFGDDTDQEAIAQI
LDFISAQTHIPILGVRGGSSMIMAAKDDHSMFFQFGPSIEQQASVILNIMEEYDWYIFSI
VTTYYPGYQDFVTKIRSTIENSFVGWELEEVLLLDMSVDDGDSKIQNQLKKLQSPVILLY
CTKEEANTIFEVAHSVGITGYGFTWIVPSLVAGDTDVVPAEFPTGLLSVSYDEWDYGLEA
RVRDGVAIITMATSAMMMDRGPHTLLKSECHGAPEKKTPISGNPNEVLRYLMNVTFEGRN
LSFSEDGYQMHPKLVIILLNKDRQWDRVGKWENGSLSMKYHVWPRFELYGGAANREDDHL
SIVTLEEAPFVIVEDVDPLSGTCMRNTVPCRKQIKKINETKESGIYIKRCCKGFCIDILK
KIAKQVKFTYDLYLVTNGKHGKKVNGTWNGMVGEVVLKNAHMAVGSLTINEERSEVIDFS
VPFIETGISVMVSRSNGTVSPSAFLEPFSADVWVMMFVMLLLVSAMAVFIFEYFSPVGYN
RCLADGKEPHGPSFTIGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASY
TANLAAFMIQEEYVDQVTGLSDKKFQSPNDFSPPFRFGTVPNGSTERNIRNNYPEMHSYM
TKFHQRNVNEALQSLKAGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGYIFATTGYGIAI
QKESLWKRHVDLAILQLFGDGEMEELESLWLTGICHHEKNEVMSSQLDVDNMAGVFYMLG
AAMALSLITFICEHWFYWQLRFCFMGVCSGQPGFVFTISRGIYSCIHGVQIEEKSSSALN
SPSATMNNTHSNIMRLLRTAKNMASLSGVNGSPHSALDFIRRESSVYDISEHRRSLAGHS
DCKPPYLPEDNMFSDYISEVERTFGNLHLKDSNVYQDHYLHHHGSTLGLTGPPPNRPHSL
GGSVSSLEGGMFDCDSLGGGVAPIFATQPCSALTHRNMSKFDLLSGQTPPSGQGFKGGLP
DVYGKFSFKGGASSSTYIPGHSYCGGRGGEEDGNVRSDVSDISTHTVTYGNLEGNAKKRK
QYRDSLKKRPASAKSRRELDEIELGYRRKPYHISHHHYHSQRSASPPFLPPERKRGTGGG
GNNDGNSYLFREKESVRDFYLDQFRPKEGVPQWEHVDLTEGPGSRDGVVGTCTSLVPVED
FLKSKPKKTDSKSGGGSGLAGGEWECRNCRASGGGGGKQMSIHGGGNGGYGSGMGCGSSG
GGNSRPSSATCMRCEGCKKTGNLYDISEDNNHLLEQMGGGTGGGGVGGMVGGPQSQSQVQ
QRRKSGGLGKQLRRQHSYDTFVDLQKEESGGMGSLIGGLGGGGGMSGPGMVGMLPPPRSV
SLKEKERYMEGNSPFAHIFERHGGSERDRDRDPLFYGGDSRKGPGSPFGLFRGGEGPHRR
SIGERDMRDRDRSLMEGGGGAGFSLSKSLYPDRVNQNPFIPTFGDDQCLMHGAKQYYMTK
QQQQQQAAKNSRSDFRSQLSTTTYMPAPASAGVMSNVTPRFPKELSLGGMNHHGSMLGVG
PPRPFNGSNGHVYEKLSSIESDV
NT seq
5112 nt
NT seq
+upstream
nt +downstream
nt
atgagtctttggctggcaaaactaaaggtattactcccccattgcagaaccatgcctgtc
tcaatatgcagctcctccccaactcaggaacaggagcgggctcgtttcacacacccaccc
atgtccccatatcttcacccccacacaagcgctccccgctgtttgctcctcattttcctg
ctgctctgccttctccatctaccaccggcctgccagtcacggagagagaagggcggggga
ggcggtggcggccactacatccctatcccccagccgccccctcatcatatggctctgccc
aacatcttacgcggcctcagcattgctgttgtcttagtgggcaactccagcgagatggcg
ctggcaggagccagagaaaaggaggacttccttcacatggcgcccaacgtggagctgctc
accatgaatgagactgaccccaagagcatcatcaagagcatctgtgacctcatgaccgag
cactggctgcagggcgtggtgttcggagatgacactgaccaggaagctatcgcccagatc
ctggacttcatttccgcccaaacccatatccccatcctcggagtacgtgggggctcctcc
atgatcatggctgctaaggatgaccactccatgttctttcaattcggcccctccatcgag
cagcaggcctctgtcattctcaacatcatggaggagtacgactggtacatcttctccatc
gtcacaacatactacccggggtaccaggactttgtcaccaagattcggagcaccattgag
aacagctttgtgggctgggaactcgaggaggttcttttgctcgacatgtctgtggacgat
ggagattcaaaaatccagaaccagctgaagaagctccagagccccgtcattctgctctac
tgcaccaaagaggaggccaatacaatcttcgaggttgcccactccgttggaatcaccggc
tatggcttcacctggatcgtcccctcactagtagctggagacacggatgtggtgccagca
gagtttccaacaggtcttctctctgtatcctatgacgagtgggattacggtctggaggcg
cgcgttcgagatggcgtggccatcatcacaatggcaacttccgccatgatgatggaccgc
gggcctcacaccttgctgaagtcggagtgccacggagctccagaaaagaagacccccatc
tcaggcaaccccaacgaagtgctcaggtacctgatgaatgtgacgtttgagggccgtaac
ctgtcgttcagtgaggacggataccagatgcaccccaagctcgtcataattctgctcaac
aaagacaggcagtgggacagggtaggtaaatgggagaacggctccttgtctatgaagtac
catgtgtggcctcgctttgagttgtatgggggggcggcgaacagggaggatgaccacctg
tccatcgtgacattggaggaagctccgttcgtcatcgtggaagacgtggatccgctgagc
ggcacctgcatgaggaacaccgtaccctgccggaaacagatcaaaaaaattaatgagaca
aaagagtctgggatctacatcaagcgctgctgtaagggcttctgcattgacattctgaaa
aaaattgccaagcaggttaaatttacatacgacctttacctggtcaccaacggaaaacac
ggcaagaaagtcaacggaacctggaacggcatggtgggagaggtagtgttaaaaaatgcc
cacatggctgttgggtccttgaccatcaacgaggaacgctccgaagtcatcgacttttcc
gtccctttcatcgagacaggaattagcgtcatggtttcccggagtaatggcaccgtttca
ccatcagccttcttagagccgttcagcgctgacgtctgggtgatgatgtttgtcatgctg
ctgctggtgtcagctatggccgtgtttatattcgagtacttcagccctgtgggctacaac
cgctgcctggctgacggcaaagagcctcacggtccatctttcaccattggtaaagcgatc
tggctgctgtggggtctagtcttcaacaattctgtgccggtccaaaaccccaaaggcacc
accagtaaaatcatggtgtcggtgtgggccttctttgctgtgattttcctggcctcctac
actgccaacctggctgccttcatgatccaagaggagtatgtggaccaggtcactggtttg
tcagacaaaaagttccagagtcccaatgacttttcacccccatttcgctttggtacagtt
cccaatggcagtacggagagaaacatcaggaacaactatccagaaatgcattcctacatg
accaagtttcatcagaggaatgtgaatgaagctttgcagagcctgaaggctggcaaatta
gatgcattcatttacgatgcagccgtactgaactacatggctggcagggacgagggctgc
aagctggtgaccattggcagcggctacatctttgccactacgggatacggcatcgccatc
cagaaggagtcgctctggaagagacacgtggacctggccattctgcagctgtttggagac
ggtgagatggaggagctggagtctctgtggctgactgggatctgccaccatgagaagaac
gaggtgatgtccagccagctggacgtggacaacatggctggtgtcttctacatgctgggt
gccgccatggcgctctccctcatcacttttatctgtgaacactggttctactggcagctg
cgcttctgcttcatgggtgtttgctccggtcagccaggctttgtcttcacaatcagcaga
ggcatctacagctgcatccacggagtgcagattgaggaaaaaagcagttctgctttgaac
tccccatcagcaaccatgaacaacacccattccaacattatgcggctcttacgtactgcc
aagaacatggcctctctgtctggggtgaacggatcgccacacagcgctttggacttcatt
cgtcgagaatcctcagtttatgacatctctgagcatcgacgcagcttagctggacattct
gactgcaaacctccgtacttaccagaagacaacatgttcagtgactacatcagtgaggtg
gagaggacatttggcaaccttcacctcaaggatagcaatgtttaccaggatcactacctg
caccaccatggctcaaccctggggctgactggccctccacccaacaggccccacagtctt
ggaggcagtgtgagttccctggaggggggcatgtttgattgtgatagcctcggaggaggg
gtggcccccatctttgccacccagccctgctctgcattgacacacagaaacatgagcaag
tttgacctgctgtccggacagactcccccttcaggccaaggattcaaaggaggactgcct
gacgtgtacgggaagttctccttcaagggcggtgcttcaagttccacgtacatcccagga
catagctactgtggagggaggggaggggaagaagatggaaatgtacgctcggatgtttca
gacatttccacgcacacagtaacttacggaaacttggagggtaatgccaagaagcgtaaa
cagtaccgagacagtctgaagaagaggccggcctctgcaaagtccagacgagagctggac
gagattgagctgggctacaggaggaaaccctaccatatcagtcaccaccactaccacagt
caacgctctgcctccccaccattcttgcccccagaacgaaagagaggaactggaggaggg
ggaaacaatgacgggaactcgtatcttttcagagaaaaggagagcgttagggatttttat
ttggatcagtttcgtcccaaagagggtgtccctcagtgggagcatgtggatttgactgag
ggccctgggagtcgagatggagttgttggaacctgtacctcactggtgccagtggaggat
tttctcaagagtaaacccaaaaagacagattcaaagagtggtggaggatctgggttggct
ggaggagagtgggaatgcagaaactgtcgggccagtgggggaggagggggaaagcaaatg
tccatccacggaggtggaaatggcggctatggcagtggaatgggctgcggttcctcggga
ggaggaaacagccgaccaagctctgcaacttgcatgcgctgcgaaggttgtaaaaagaca
ggaaacctctatgatatcagtgaggacaacaaccacctcttggaacagatggggggagga
acgggtgggggaggagttggaggtatggttggaggccctcagtctcaatctcaggtccag
cagagaaggaagagtggaggacttggtaagcagttgaggcgccaacattcgtacgacaca
tttgtggacctccagaaagaggaatctggtgggatgggaagtttgatcgggggtttggga
ggaggtggagggatgagtggaccaggcatggtgggaatgttgcccccacctaggagtgtc
agtttgaaggaaaaggagcgctacatggagggtaacagtccgtttgcacacatatttgag
cgacatgggggctcagagagagacagagacagagacccactgttttatggaggtgacagt
cgaaaaggtcctggatcaccatttggccttttcaggggtggtgaaggcccccatcgtcgc
tccattggagaaagagacatgagggacagagacagatctttgatggaaggaggaggtggg
gcaggattctctctatccaaatccctttaccctgaccgggtaaaccaaaacccttttata
cccacctttggcgacgatcagtgtctgatgcatggagccaaacaatattacatgacaaag
caacagcagcagcaacaagctgccaaaaacagccgtagtgacttcaggagccagttaagt
acaacgacttatatgccggcgcctgcctcagccggcgttatgtctaatgtgactccccgg
ttcccgaaagagctcagccttggtggaatgaaccaccatggctccatgctgggggttggt
cccccacgtcccttcaatggaagcaatggccatgtgtatgagaaactctccagcatcgag
tctgatgtgtaa
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integrated database retrieval system
