Oryzias latipes (Japanese medaka): 101173962
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Entry
101173962 CDS
T02443
Symbol
slc6a4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ola02000
]
101173962 (slc6a4)
Transporters [BR:
ola02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
101173962 (slc6a4)
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
101173962
NCBI-ProteinID:
XP_004075963
UniProt:
H2MFU2
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Position
13:complement(27549741..27574098)
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AA seq
671 aa
AA seq
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MESKDTMMTSMQTKDKQEYEEDKGSKQPEAQEEEPHENANLPLVDGLADRGPKSVTSGSG
QQVSNGFTTSTPQSPREALGTAVGAVGMPPASGGDTGASAPFGGLRTLVVQQTSLDRPRE
TWSKKMDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLLPYLLMAVFGGVPLFYMELALG
QFHRSGCISIWKHICPIFKGIGFAICIIALYIAFYYNTIMAWALYYLLSSFRPTLPWTTC
TNSWNTVNCYRYLSSDQNVTWSNLSTSPAEEFYTRQVLQVHLSSGLHQLGSVSWQLALCL
LFIFTIVYFSIWKGVKTSGKVVWVTATFPYLVLLILLIRGATLPGAWRGVVFYLKPDWQK
LLSTTVWIDAAAQIFFSLGPGFGVLLAFASYNPFHNNCYKDALVTSSVNCLTSFLSGFVI
FTVLGYMAEMRQQNVDVVAKDAGPSLLFIIYAEAIANMPAATFFAIIFFLMIIMLGLDST
FAGLEGVITAMLDEFPRLLAKRREWFVFGLVCVCYLGALSTLTYGGAFVVKLFEEYATGP
AVITVVLLEVIAVSWFYGTSRFCNDIQVMLGFYPGCFWRVCWVAICPCFLLFIIISFLAF
PPEVKLFNYTYPPWTTVLGYCIGVSSFICVPSYMVYYLLNAKGTFKQRLLKSITPEPSSE
NHRDYIVTNAI
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggagtccaaagataccatgatgacaagcatgcagaccaaggacaagcaggagtacgag
gaggacaaagggagcaagcagccggaggcccaggaggaggagccgcatgaaaacgccaac
ctgcccttagttgatggccttgcagacagaggacccaagagcgtgacctccggctcaggt
cagcaggtgtcgaacggcttcacaacatccacccctcagagtcccagagaggcgctgggc
actgcggtgggggctgtgggcatgccccccgcctccggaggggacaccggggcctcagcg
ccattcgggggcctaagaactctggtggtccagcaaaccagcctggacaggcccagggag
acctggagcaagaagatggacttcctgctgtcagtgatcggctacgccgtggacctggga
aacgtctggcgcttcccatacatctgctaccaaaacggaggaggtgcttttctgctaccc
tacctgttgatggcggtgttcggaggtgtgcctctcttctacatggagctggctctgggg
cagttccatcgcagcggctgcatctccatctggaagcacatctgccccatcttcaaagga
attggctttgccatctgcatcatagcgctctacattgccttctattacaacaccatcatg
gcgtgggccctctattacctgctgtcatcttttcggcccaccctgccctggaccacctgc
accaacagctggaacacagtcaactgctaccgctacctgtcctctgaccaaaacgtgact
tggtccaacttatccacgtcccccgccgaggagttctatactcgccaggtgttgcaggtc
cacctctcatcaggtctgcaccagctgggctctgtcagctggcaactggctctctgtctg
ctcttcatcttcaccattgtttatttcagtatctggaaaggggtcaagacgtctggaaag
gtggtatgggtgacagccacgtttccatatctggttctcctgattctgctcattcgaggg
gccactctacctggggcctggagaggcgtggtcttctatctcaagccagactggcagaaa
ctactcagcaccacagtgtggatagacgcagccgctcagatctttttctccctgggtccg
ggcttcggcgtgcttctcgccttcgccagctacaatccatttcacaacaactgctacaag
gatgcactggtcactagctcggtgaattgcctgaccagctttctgtcaggcttcgtcatc
ttcacagttctgggatacatggcagaaatgcggcagcagaacgttgatgttgtggccaag
gatgcaggccccagtctgttgttcatcatttatgcagaagccatcgcgaacatgcctgcc
gccacgttcttcgccatcatcttcttcctcatgatcataatgttgggtctggacagcacg
tttgctggtttggaaggggtgatcacagcgatgctggacgagtttccgcgtctgcttgct
aagaggcgagagtggtttgtctttgggcttgtgtgcgtctgctacctgggagccctgtct
acgctcacatatggaggagcgtttgtggtgaagctgtttgaagagtatgccacagggccc
gcggtcatcaccgtggtgctgctagaggtcatcgccgtttcctggttttacggcaccagc
cgcttctgtaacgacatccaggtcatgcttggtttctacccggggtgtttctggcgagtc
tgctgggtagccatctgcccctgcttccttctgttcatcatcatcagcttcctggctttt
cctccagaggtcaagttgttcaactacacatacccaccgtggacaactgtgttgggctac
tgcattggggtgtcttccttcatctgcgtgccgtcttatatggtttactacttgctgaac
gcaaagggcaccttcaaacagcgcctcttaaaaagcatcaccccggagcccagcagtgaa
aaccacagagactacatcgtgaccaacgcaatctga
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