Oryzias latipes (Japanese medaka): 101175170
Help
Entry
101175170 CDS
T02443
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04020
Calcium signaling pathway
ola04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
101175170
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
101175170
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ola04040
]
101175170
Ion channels [BR:
ola04040
]
Ligand-gated channels
Glutamate (ionotropic)
101175170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
DUF6724
SIP
Cas_APE2256
Motif
Other DBs
NCBI-GeneID:
101175170
NCBI-ProteinID:
XP_011477897
UniProt:
A0A3P9MJ52
A0A3B3H6I4
LinkDB
All DBs
Position
9:27190085..27277821
Genome browser
AA seq
939 aa
AA seq
DB search
MELRSVLLLAVLHCCSVALCGCEPRLVNVGAVLSQKRYEQVFKEAVSQANALYGKDKFKM
NAISVTHKPNAIQMALSVCEDLISNQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVVG
LTTRMSIYSDKSIHLSFLRTVPPYSHQAQVWFDLMREFRWNHIILIVSDDHEGRAAQKKL
ETLLEERETKTKNRNYENLDQQNFDFRRTPKAEKVLLFNQDTNLTALLLEARDLEARVII
LSASEDEAAAVYKAARQLNMTGSGYVWLVGEREMNGKALNEAPDGLLGLQLINGKNESAH
IADAVAVVAQSLQELFEKENITEPPRGCVGNTNIWRTGPLFKRVLMSSKYPDGLTGRIEF
NDDGDRRFATYSILNYQQKPGRVVQVGIFNGTQVVMNPQRKIIWPGGETEKPVGYQMSTK
LKIVTIHQEPFVYVKPTKSDGTCKEEYTVNGVLIKKVICTGPNGTTPGQPIVPQCCYGFC
IDLLIKLAMSMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTI
NNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYL
LDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGF
AMIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVEL
STMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFG
IGMRKDSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFML
VAGGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDRKSGRAEPEPKTSFR
SITSTSDLKRRMAPGDATPYPTDITGQLNLSDPSVSTVV
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atggagttgcgcagcgtgctcctgctggcggtgctgcactgctgctcggtggcgctgtgc
ggctgcgagccccgcctggtcaacgtcggcgccgtcctgagtcagaagcgctatgagcag
gtgttcaaggaggcggtgagtcaggccaacgcgctctacggcaaggacaagttcaagatg
aacgccatctctgtcacacacaaacccaacgccattcagatggcgctgtccgtctgcgag
gacctgatctccaaccaggtatacgcaatcctggttagccatcctcctcagtccaacgat
catctgactccaacgcctgtctcctatacagccggcttctaccgcattcctgtggttggc
ctaacgactcgcatgtccatctactcagacaagagcatccacctgtcgttcctgaggacg
gtgcccccgtactcacaccaggctcaggtgtggttcgacctcatgagagagttcaggtgg
aaccacatcatcctgatagtcagcgacgaccacgagggccgagccgcccagaaaaagctt
gagacgctgcttgaagagcgcgagaccaagactaaaaacaggaactatgaaaacctcgac
caacagaactttgacttcaggagaacacccaaggcagagaaagttctgctgttcaaccag
gacaccaacctgacagcactactgctggaagccagagacctggaggccagagttatcatc
ctctcagcaagtgaggacgaggctgcagccgtctacaaggcagcccggcagctcaacatg
accggctctggttacgtgtggctggtcggggagagggagatgaacggcaaagctctgaac
gaagctccagacggcctgctgggcctccaactgatcaacggtaagaacgagtcggctcat
attgcggacgccgtcgccgtggttgctcagtctctgcaggaattgtttgagaaagagaac
atcacagagcccccgcgaggatgcgtaggaaacaccaatatctggagaaccggcccgctt
ttcaaaagagtgctgatgtcatcaaagtaccctgatggcttgacgggccgaattgagttt
aatgacgatggagaccggcgctttgctacctatagcatcctgaattatcagcagaaacca
ggccgtgttgtccaggtcggaatcttcaacggaactcaggttgtgatgaatcctcagagg
aagatcatctggcctggaggagaaaccgagaaaccagtgggataccagatgtcaaccaaa
ctgaagattgtgaccatccaccaggaaccttttgtttatgtgaagccaacaaagagtgac
ggaacgtgcaaagaagaatacacggttaatggagtcctgataaagaaagtgatctgtact
ggacccaatgggaccacaccaggtcaacccatcgtccctcagtgctgttatggcttctgc
attgacctgctcatcaagctggctatgagcatgaacttcacctatgaggtacacctggtg
gctgatgggaagtttgggacgcaggagcgggtaaacaacagcaacaagaaggagtggaac
gggatgatgggggagctgctgggggggctagccgacatgattgtggccccccttaccatc
aacaacgagcgcgctcaatacattgagttctccaagcccttcaaataccaggggctcacc
atcctcgtcaagaaggaaatccctcgcagcactctggactcgttcatgcagcctttccag
agcacactgtggcttttagtcggtctgtcggtccatgtggtggcagtgatgctttaccta
ctagaccggttcagcccgtttggaaggttcaaagtgaacagtgaagaagaagaggaagac
gccctcaccttgtcctcggccatgtggttctcttggggagttttgctgaactctgggatc
ggagaaggagctcccaggagcttctcagctaggatcctggggatggtgtgggcgggtttc
gccatgatcatcgtagcatcatatactgccaatttggcagccttcctggtgctggaccgg
cctgaggagcgcatcactggcatcaatgaccccaggctgcgtaacccatcagataagttc
atctatgccacagtgaagcagagctcggtggatatttacttcagacggcaggtggaactg
agcaccatgtaccggcacatggagaaacacaactatgagagcgccgctgaggccatccag
gctgtccgagacaacaagcttcacgccttcatctgggacagtgctgtgttggagtttgag
gcttcacaaaagtgcgatctggttacaacaggagagcttttcttccgctcaggctttggg
attggaatgaggaaagacagtccatggaaacagaacgtttctctggccattctcagttca
catgaaaatggcttcatggaggatctggacaagacttgggtacgataccaggagtgcgac
tccaggagtaatgctcctgcaactctcaccttcgagaacatggcgggcgtgttcatgctg
gtcgccggcggcatcgtggcggggatcttcctcattttcatcgagatcgcttacaaacgt
cacaaagacgcccgcaggaaacagatgcagctggccttcgccgccgtgaacgtgtggagg
aagaacctgcaggataggaaaagtggtagagcagagcccgagcccaaaacctcttttagg
tccatcacttcgacctccgacctcaaacgccgtatggcccccggggacgccacgccgtac
ccgactgacatcaccggccagctcaacctatcagatccgtccgtcagcaccgtggtctga
DBGET
integrated database retrieval system