Oryzias latipes (Japanese medaka): 101175506
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Entry
101175506 CDS
T02443
Name
(RefSeq) hemicentin-1
KO
K06499
carcinoembryonic antigen-related cell adhesion molecule
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ola03037
]
101175506
04147 Exosome [BR:
ola04147
]
101175506
04090 CD molecules [BR:
ola04090
]
101175506
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ola00537
]
101175506
Cilium and associated proteins [BR:
ola03037
]
Other cilia and associated proteins
Stereociliary proteins
101175506
Exosome [BR:
ola04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
101175506
Exosomal proteins of bladder cancer cells
101175506
CD molecules [BR:
ola04090
]
Proteins
101175506
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ola00537
]
Antigens
101175506
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
Ig_5
V-set
Ig_4
C2-set_2
V-set_CD47
Ig_6
PKD
C1-set
Motif
Other DBs
NCBI-GeneID:
101175506
NCBI-ProteinID:
XP_023819896
LinkDB
All DBs
Position
16:21418972..21434116
Genome browser
AA seq
1524 aa
AA seq
DB search
MDNKSEATLGLFLLIMLQRFVVSGGVEVRPSINPAIAGNAVTLSLFPSENIKSGSWSVGQ
SPVVTWQGTHQAVFPSHTGRAFVNISTGALTLTSLTVADSGFYEVVGTDPQLRANTSITV
EESISNVTLKVTQTGLVEFRSSALMTCSVSSGSSLSFLWTNGSSVVTVSDRVQLSNGSST
LRVLNLTRFDSGPYRCSVSNPVSNGTSNTENVTISYGPDNMALSVNGQETTSFAAGSNLS
MLCSAESNPAAQLQWAFKGELVNSTGTWLKLINVSENQTGSYSCLAFNNNTSKYNNITRY
ITISKLVTWSREKFSAEQKMERRLSPAVTLVLILTIISVADRAFSQSTLVSEKVLPVGSN
VTLSGANVSLGTWIYNSSLIAVIFSNQISVSSSWKWRTSINPTNNDLTIRGLNVNDSGEY
KLEDLEHTAVLLKLSVQVPISDASLQASQINLIEFNDTVVFKCFVSAGSFVSYQLLNGKS
TYAPMVNGSLTMPNVTRDNQGPFSCVASNGLGNMSSSSVLLNISYGPDKPMLKVMPEKSV
YMSGSEITLSCSADSSPSATVQWMFNGTNLNKNSQQLKLENVSSNNSGVYECIVHNSVTL
RHNSGSVGVNIMDPITSVVVKNTGGPAILHKSLTLLCQVTGPVQNIQWWKDDQLISPNST
AASADNRTLTFNAVQRSDDGKYVCKAFNAVSNMSSSLFQVTVHYGPERVNISGPNLKKTG
DNVTLSCQAESTPPSLFMWYFKDAVVSNMSTFNSPPLTKELSGQYTCVAFNNITNWKSNV
SINLSVIDPIVNVTITTNKIPVIENELHELTCEVTGDVDEIHWMAKWAELKEDNTTVFHM
NNKTVTFIPVDIDDAGTYHCTAVNVFGNMTSRAYNLVVNYGPRMTTVHGPTAAKAGASVN
LSCTADSNPESSFRWYFNDAVVSNMSQFTTPPLSKELSGQYTCMVFNSVTNKTSNASLML
SVIEPIANVQVQPMNSAVEGRSYNLTCGATGPVDGVYWMKDSKPLQAGSRIIFLMNNKTL
SFMPADRSDMGNYQCVASNAVENMTSNPYILTVNYGPDMVNVTGPSVAKTGQSVSLYCSA
ASAPMSHFTWHVGGSVVANTSEYVTPPLTPSMSGTYVCTAFNNVTNQNRTGYLNLSVVDP
IKKVQVEPEMNSCMEGYSYTLTCNVTGSVDNIYWMKDWMPLQADNRKVFMMDNKTVKFVS
VERSDAGNYSCMAVNSFGNMTSSLYKLVVNYGPDTPVIQGSEFGEVGSNAVFNCSASSTP
PSQFSWWFNDSQVAVTSMFTAGPLTFNMSGNYTCMAHNTATGKNNTNSIMLTVIEAITSI
MIRNYTTPINEKNFSLTCEVVGPYDAIYWMKNGEYLNVSDSCVSQQAMHCTEKNMLHFTP
ITLKDDGKYQCVASNRGAVHMSPEYTPLINYGPMSVTISGPDAGSEGTSVSLRCSADSQP
QCDFQWYFSNQITFVKTGPEITFNVTQMTKGIYMCKATNPVTSISMFQTKAFALGGQASV
MHFAAHGSLMSMSLLVFTAHMLFH
NT seq
4575 nt
NT seq
+upstream
nt +downstream
nt
atggacaacaagagtgaagcaacgctgggactttttctgctgatcatgcttcagcgtttt
gtggtgtctggtggcgtggaggtcaggccttccatcaaccccgccatagccgggaacgcc
gtgacgctgtcgctgtttccgtctgagaacataaaaagtggaagctggtcggtgggacag
tcccccgtggtcacctggcaggggactcaccaggcggtcttccccagccacaccggcagg
gcgtttgtgaacatcagcaccggagctctcactctgacctctctcaccgtggctgactcg
ggcttctatgaggtggtgggaacggacccccagctgagggccaacacttccatcacggta
gaggaatccatctcgaacgtgactctgaaagtgactcagacgggcctggtggagtttcgg
agttcagccctcatgacgtgctcagtctcctctggttcctccctgtcctttctctggacg
aacggcagctctgtggtcacagtcagcgacagagttcagctctcaaatggaagctccact
ctcagagttttaaacttgacccgctttgactctggaccttacaggtgttcagtgtccaat
cctgtcagtaacggcacaagcaatacagaaaacgttaccatcagctatggtccggacaac
atggctctctctgtgaatggtcaggaaacgacttcctttgccgctggatctaatttgagc
atgctctgctctgcagagtccaatcctgcagcccagcttcagtgggctttcaaaggagag
cttgtgaacagcacaggaacatggctgaagctgatcaacgtcagtgagaaccagactggt
tcatattcttgcctggcttttaacaataacaccagcaaatacaacaacatcaccagatac
ataacaatatcaaaattagtcacttggtcaagagagaagttctcagctgaacagaagatg
gagagaagattgagccctgcagtgacgctggtcctaatcctgaccataatatccgtagca
gatcgcgcgttcagccaaagcactcttgtctcagaaaaagttttaccagtgggcagcaat
gtaacactcagtggggccaatgtgtcactaggaacatggatctataacagcagtttgatt
gccgtgattttttcaaatcaaattagtgtaagcagctcttggaagtggagaacatcaata
aatccaactaacaatgatttgaccattagaggcctgaatgtgaacgattctggagaatac
aaattagaagacctggaacatacagctgttcttttaaaactctcagtccaagttcctatt
tctgatgcaagcctgcaagcaagccaaatcaatctgatagaattcaacgacacagtggtc
tttaagtgctttgtgtctgctggctcctttgtgtcctaccaactgttgaatggaaaatct
acatatgcacccatggtaaatggcagcctcaccatgccaaacgtgacccgtgacaatcaa
ggcccgttcagctgcgttgcatcaaatggacttgggaacatgagtagctcatcagtgcta
ctgaacatcagctatggtccagacaagccaatgttaaaagtgatgcccgagaagagcgtg
tacatgtcgggatctgaaatcacactgtcatgctcagcagactccagtccttcagcaaca
gtgcagtggatgtttaatgggacgaatctcaacaaaaacagccaacagcttaaattagag
aatgtttcatcgaacaactctggagtttatgaatgcatcgtccacaactcagtcacttta
aggcacaacagtggaagtgtgggggttaacatcatggatcccattacttctgttgtggtg
aaaaacactgggggccctgcaattcttcataaatcccttacacttctatgtcaagtgact
gggccggttcaaaacattcagtggtggaaagatgaccagcttatttctcctaacagcacg
gcagcatctgctgataaccggacactgacttttaatgcagtccagcgttcagatgatgga
aaatatgtgtgcaaggcttttaacgctgtgagcaacatgtccagcagcctcttccaggtc
acagttcactatggaccagaaagggtgaatatttcaggacctaacctgaagaaaacagga
gacaatgtgacactcagctgccaggcggaatcaaccccccccagcctgttcatgtggtac
ttcaaggatgctgttgtgtccaacatgtccacatttaattcacctccacttaccaaagaa
ctgagcgggcagtacacctgcgtggccttcaacaacatcactaactggaaaagcaacgtc
agcataaacctttcagttattgatccaattgtgaatgtgactataacaacaaacaaaatt
cccgtcattgaaaacgaactgcatgagttaacctgtgaggtcactggagatgttgatgag
attcactggatggcgaagtgggcagaactgaaagaggacaacacaacagttttccacatg
aacaacaagacggtcacatttattcctgtagatattgacgatgcaggaacctaccactgc
acagctgtaaatgtctttggaaacatgaccagtcgtgcctacaaccttgttgtcaactat
ggaccaaggatgacaactgttcatggaccaactgcagcaaaggcaggagctagtgtcaat
ctgagctgcacggcagattccaaccctgagagctccttcagatggtatttcaatgatgct
gtggtctccaacatgtctcagtttaccacacctccactttccaaagaactgagtggccag
tacacctgtatggtcttcaacagtgtcaccaacaaaaccagcaacgcctccttaatgctt
tccgttattgagccaattgcaaatgttcaagtacagccaatgaactctgcagtggaaggt
cggtcctataatttaacatgcggcgcaacaggaccagttgatggcgtttactggatgaag
gattcgaaaccactgcaggcgggcagcagaatcattttcctaatgaacaacaagacactc
tcgtttatgccagcggatcgttctgacatgggaaactaccagtgcgtggcgagtaacgct
gttgaaaacatgactagtaatccctacatcctcactgtcaactatggaccagatatggta
aatgtcactggaccaagtgtagcaaagacaggacaaagtgtcagtctctactgctctgca
gcatcagcccccatgagccacttcacatggcatgttggtggttctgtggttgccaacact
tctgagtatgttactcctcctctaaccccaagcatgagtgggacatatgtctgcacagca
ttcaacaacgtcacaaaccaaaacaggacgggttacctgaacctttctgttgttgacccc
ataaaaaaagtacaggttgagccagaaatgaattcctgcatggagggttattcgtacact
ctaacatgcaatgtaactggatctgttgataacatttactggatgaaggactggatgcca
ctgcaggcagacaaccgaaaagttttcatgatggacaacaagacagtcaagtttgtgtct
gtggaacgttctgatgctggaaactacagctgcatggctgttaacagttttggaaacatg
actagctctctttacaaacttgttgtcaactatggacccgacacacccgtcatccaaggg
tcagagtttggggaagtgggaagtaacgccgtcttcaattgctctgcttcatcaactcct
ccaagtcaatttagttggtggttcaatgactctcaagtagctgttacatcaatgtttact
gctggtcctttgacgtttaacatgagcggtaactacacctgtatggctcacaataccgcc
acaggaaaaaacaacaccaactcaattatgctcacagttatagaggcaataacgtctatc
atgatacgaaactatacaactccaattaacgagaaaaacttctcactcacatgtgaggtt
gttggaccctatgacgccatctactggatgaagaacggcgagtacctaaacgtgagcgac
tcctgtgtgagccagcaggcaatgcactgcactgagaagaacatgcttcacttcactcca
ataaccctgaaggatgatgggaaataccagtgtgttgcttccaacaggggagcagttcat
atgagtccagagtacacgcccctgataaactatggtcccatgagtgtaactatttccgga
ccggatgcgggttcagagggcacctctgtgtccctgaggtgctccgctgattctcagcca
cagtgtgacttccagtggtacttctccaatcagataacgtttgtgaagacgggacctgaa
attactttcaatgtaacacagatgaccaaggggatctacatgtgcaaggcaacaaaccct
gtgacaagcatctcaatgttccaaaccaaagctttcgctcttggaggccaggccagtgtt
atgcattttgccgcccatggaagcctgatgtcaatgagtctgcttgtgttcactgcacac
atgcttttccactga
DBGET
integrated database retrieval system