KEGG   Oryzias latipes (Japanese medaka): 101175506
Entry
101175506         CDS       T02443                                 
Name
(RefSeq) hemicentin-1
  KO
K06499  carcinoembryonic antigen-related cell adhesion molecule
Organism
ola  Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:ola00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:ola03037]
    101175506
   04147 Exosome [BR:ola04147]
    101175506
   04090 CD molecules [BR:ola04090]
    101175506
   00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:ola00537]
    101175506
Cilium and associated proteins [BR:ola03037]
 Other cilia and associated proteins
  Stereociliary proteins
   101175506
Exosome [BR:ola04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   101175506
  Exosomal proteins of bladder cancer cells
   101175506
CD molecules [BR:ola04090]
 Proteins
  101175506
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:ola00537]
 Antigens
  101175506
SSDB
Motif
Pfam: Ig_3 I-set Ig_2 ig Ig_5 V-set Ig_4 C2-set_2 V-set_CD47 Ig_6 PKD C1-set
Other DBs
NCBI-GeneID: 101175506
NCBI-ProteinID: XP_023819896
LinkDB
Position
16:21418972..21434116
AA seq 1524 aa
MDNKSEATLGLFLLIMLQRFVVSGGVEVRPSINPAIAGNAVTLSLFPSENIKSGSWSVGQ
SPVVTWQGTHQAVFPSHTGRAFVNISTGALTLTSLTVADSGFYEVVGTDPQLRANTSITV
EESISNVTLKVTQTGLVEFRSSALMTCSVSSGSSLSFLWTNGSSVVTVSDRVQLSNGSST
LRVLNLTRFDSGPYRCSVSNPVSNGTSNTENVTISYGPDNMALSVNGQETTSFAAGSNLS
MLCSAESNPAAQLQWAFKGELVNSTGTWLKLINVSENQTGSYSCLAFNNNTSKYNNITRY
ITISKLVTWSREKFSAEQKMERRLSPAVTLVLILTIISVADRAFSQSTLVSEKVLPVGSN
VTLSGANVSLGTWIYNSSLIAVIFSNQISVSSSWKWRTSINPTNNDLTIRGLNVNDSGEY
KLEDLEHTAVLLKLSVQVPISDASLQASQINLIEFNDTVVFKCFVSAGSFVSYQLLNGKS
TYAPMVNGSLTMPNVTRDNQGPFSCVASNGLGNMSSSSVLLNISYGPDKPMLKVMPEKSV
YMSGSEITLSCSADSSPSATVQWMFNGTNLNKNSQQLKLENVSSNNSGVYECIVHNSVTL
RHNSGSVGVNIMDPITSVVVKNTGGPAILHKSLTLLCQVTGPVQNIQWWKDDQLISPNST
AASADNRTLTFNAVQRSDDGKYVCKAFNAVSNMSSSLFQVTVHYGPERVNISGPNLKKTG
DNVTLSCQAESTPPSLFMWYFKDAVVSNMSTFNSPPLTKELSGQYTCVAFNNITNWKSNV
SINLSVIDPIVNVTITTNKIPVIENELHELTCEVTGDVDEIHWMAKWAELKEDNTTVFHM
NNKTVTFIPVDIDDAGTYHCTAVNVFGNMTSRAYNLVVNYGPRMTTVHGPTAAKAGASVN
LSCTADSNPESSFRWYFNDAVVSNMSQFTTPPLSKELSGQYTCMVFNSVTNKTSNASLML
SVIEPIANVQVQPMNSAVEGRSYNLTCGATGPVDGVYWMKDSKPLQAGSRIIFLMNNKTL
SFMPADRSDMGNYQCVASNAVENMTSNPYILTVNYGPDMVNVTGPSVAKTGQSVSLYCSA
ASAPMSHFTWHVGGSVVANTSEYVTPPLTPSMSGTYVCTAFNNVTNQNRTGYLNLSVVDP
IKKVQVEPEMNSCMEGYSYTLTCNVTGSVDNIYWMKDWMPLQADNRKVFMMDNKTVKFVS
VERSDAGNYSCMAVNSFGNMTSSLYKLVVNYGPDTPVIQGSEFGEVGSNAVFNCSASSTP
PSQFSWWFNDSQVAVTSMFTAGPLTFNMSGNYTCMAHNTATGKNNTNSIMLTVIEAITSI
MIRNYTTPINEKNFSLTCEVVGPYDAIYWMKNGEYLNVSDSCVSQQAMHCTEKNMLHFTP
ITLKDDGKYQCVASNRGAVHMSPEYTPLINYGPMSVTISGPDAGSEGTSVSLRCSADSQP
QCDFQWYFSNQITFVKTGPEITFNVTQMTKGIYMCKATNPVTSISMFQTKAFALGGQASV
MHFAAHGSLMSMSLLVFTAHMLFH
NT seq 4575 nt   +upstreamnt  +downstreamnt
atggacaacaagagtgaagcaacgctgggactttttctgctgatcatgcttcagcgtttt
gtggtgtctggtggcgtggaggtcaggccttccatcaaccccgccatagccgggaacgcc
gtgacgctgtcgctgtttccgtctgagaacataaaaagtggaagctggtcggtgggacag
tcccccgtggtcacctggcaggggactcaccaggcggtcttccccagccacaccggcagg
gcgtttgtgaacatcagcaccggagctctcactctgacctctctcaccgtggctgactcg
ggcttctatgaggtggtgggaacggacccccagctgagggccaacacttccatcacggta
gaggaatccatctcgaacgtgactctgaaagtgactcagacgggcctggtggagtttcgg
agttcagccctcatgacgtgctcagtctcctctggttcctccctgtcctttctctggacg
aacggcagctctgtggtcacagtcagcgacagagttcagctctcaaatggaagctccact
ctcagagttttaaacttgacccgctttgactctggaccttacaggtgttcagtgtccaat
cctgtcagtaacggcacaagcaatacagaaaacgttaccatcagctatggtccggacaac
atggctctctctgtgaatggtcaggaaacgacttcctttgccgctggatctaatttgagc
atgctctgctctgcagagtccaatcctgcagcccagcttcagtgggctttcaaaggagag
cttgtgaacagcacaggaacatggctgaagctgatcaacgtcagtgagaaccagactggt
tcatattcttgcctggcttttaacaataacaccagcaaatacaacaacatcaccagatac
ataacaatatcaaaattagtcacttggtcaagagagaagttctcagctgaacagaagatg
gagagaagattgagccctgcagtgacgctggtcctaatcctgaccataatatccgtagca
gatcgcgcgttcagccaaagcactcttgtctcagaaaaagttttaccagtgggcagcaat
gtaacactcagtggggccaatgtgtcactaggaacatggatctataacagcagtttgatt
gccgtgattttttcaaatcaaattagtgtaagcagctcttggaagtggagaacatcaata
aatccaactaacaatgatttgaccattagaggcctgaatgtgaacgattctggagaatac
aaattagaagacctggaacatacagctgttcttttaaaactctcagtccaagttcctatt
tctgatgcaagcctgcaagcaagccaaatcaatctgatagaattcaacgacacagtggtc
tttaagtgctttgtgtctgctggctcctttgtgtcctaccaactgttgaatggaaaatct
acatatgcacccatggtaaatggcagcctcaccatgccaaacgtgacccgtgacaatcaa
ggcccgttcagctgcgttgcatcaaatggacttgggaacatgagtagctcatcagtgcta
ctgaacatcagctatggtccagacaagccaatgttaaaagtgatgcccgagaagagcgtg
tacatgtcgggatctgaaatcacactgtcatgctcagcagactccagtccttcagcaaca
gtgcagtggatgtttaatgggacgaatctcaacaaaaacagccaacagcttaaattagag
aatgtttcatcgaacaactctggagtttatgaatgcatcgtccacaactcagtcacttta
aggcacaacagtggaagtgtgggggttaacatcatggatcccattacttctgttgtggtg
aaaaacactgggggccctgcaattcttcataaatcccttacacttctatgtcaagtgact
gggccggttcaaaacattcagtggtggaaagatgaccagcttatttctcctaacagcacg
gcagcatctgctgataaccggacactgacttttaatgcagtccagcgttcagatgatgga
aaatatgtgtgcaaggcttttaacgctgtgagcaacatgtccagcagcctcttccaggtc
acagttcactatggaccagaaagggtgaatatttcaggacctaacctgaagaaaacagga
gacaatgtgacactcagctgccaggcggaatcaaccccccccagcctgttcatgtggtac
ttcaaggatgctgttgtgtccaacatgtccacatttaattcacctccacttaccaaagaa
ctgagcgggcagtacacctgcgtggccttcaacaacatcactaactggaaaagcaacgtc
agcataaacctttcagttattgatccaattgtgaatgtgactataacaacaaacaaaatt
cccgtcattgaaaacgaactgcatgagttaacctgtgaggtcactggagatgttgatgag
attcactggatggcgaagtgggcagaactgaaagaggacaacacaacagttttccacatg
aacaacaagacggtcacatttattcctgtagatattgacgatgcaggaacctaccactgc
acagctgtaaatgtctttggaaacatgaccagtcgtgcctacaaccttgttgtcaactat
ggaccaaggatgacaactgttcatggaccaactgcagcaaaggcaggagctagtgtcaat
ctgagctgcacggcagattccaaccctgagagctccttcagatggtatttcaatgatgct
gtggtctccaacatgtctcagtttaccacacctccactttccaaagaactgagtggccag
tacacctgtatggtcttcaacagtgtcaccaacaaaaccagcaacgcctccttaatgctt
tccgttattgagccaattgcaaatgttcaagtacagccaatgaactctgcagtggaaggt
cggtcctataatttaacatgcggcgcaacaggaccagttgatggcgtttactggatgaag
gattcgaaaccactgcaggcgggcagcagaatcattttcctaatgaacaacaagacactc
tcgtttatgccagcggatcgttctgacatgggaaactaccagtgcgtggcgagtaacgct
gttgaaaacatgactagtaatccctacatcctcactgtcaactatggaccagatatggta
aatgtcactggaccaagtgtagcaaagacaggacaaagtgtcagtctctactgctctgca
gcatcagcccccatgagccacttcacatggcatgttggtggttctgtggttgccaacact
tctgagtatgttactcctcctctaaccccaagcatgagtgggacatatgtctgcacagca
ttcaacaacgtcacaaaccaaaacaggacgggttacctgaacctttctgttgttgacccc
ataaaaaaagtacaggttgagccagaaatgaattcctgcatggagggttattcgtacact
ctaacatgcaatgtaactggatctgttgataacatttactggatgaaggactggatgcca
ctgcaggcagacaaccgaaaagttttcatgatggacaacaagacagtcaagtttgtgtct
gtggaacgttctgatgctggaaactacagctgcatggctgttaacagttttggaaacatg
actagctctctttacaaacttgttgtcaactatggacccgacacacccgtcatccaaggg
tcagagtttggggaagtgggaagtaacgccgtcttcaattgctctgcttcatcaactcct
ccaagtcaatttagttggtggttcaatgactctcaagtagctgttacatcaatgtttact
gctggtcctttgacgtttaacatgagcggtaactacacctgtatggctcacaataccgcc
acaggaaaaaacaacaccaactcaattatgctcacagttatagaggcaataacgtctatc
atgatacgaaactatacaactccaattaacgagaaaaacttctcactcacatgtgaggtt
gttggaccctatgacgccatctactggatgaagaacggcgagtacctaaacgtgagcgac
tcctgtgtgagccagcaggcaatgcactgcactgagaagaacatgcttcacttcactcca
ataaccctgaaggatgatgggaaataccagtgtgttgcttccaacaggggagcagttcat
atgagtccagagtacacgcccctgataaactatggtcccatgagtgtaactatttccgga
ccggatgcgggttcagagggcacctctgtgtccctgaggtgctccgctgattctcagcca
cagtgtgacttccagtggtacttctccaatcagataacgtttgtgaagacgggacctgaa
attactttcaatgtaacacagatgaccaaggggatctacatgtgcaaggcaacaaaccct
gtgacaagcatctcaatgttccaaaccaaagctttcgctcttggaggccaggccagtgtt
atgcattttgccgcccatggaagcctgatgtcaatgagtctgcttgtgttcactgcacac
atgcttttccactga

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