Horticoccus luteus: K0B96_04080
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Entry
K0B96_04080 CDS
T07405
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
ole
Horticoccus luteus
Pathway
ole00540
Lipopolysaccharide biosynthesis
ole01100
Metabolic pathways
ole01250
Biosynthesis of nucleotide sugars
Module
ole_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
ole00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
K0B96_04080 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ole01005
]
K0B96_04080 (rfaD)
Enzymes [BR:
ole01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
K0B96_04080 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
ole01005
]
Core region
K0B96_04080 (rfaD)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
NAD_binding_10
KR
Ldh_1_N
Motif
Other DBs
NCBI-ProteinID:
QYM79806
UniProt:
A0A8F9TXH4
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Position
complement(1027256..1028254)
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AA seq
332 aa
AA seq
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MSTLTGRILVTGGAGFIGSALIWALNERGVGDIVVTDFLGADEKWKNLTPLRFADYVEAD
VFRRQIADRAHAFGKFSAVFHLGACSATTERNATYLIDNNYAYTKELAAWALAQNARFIY
ASSAATYGDGAQGMDDRDDNLSRLRPLNMYGYSKHLFDVHAQHSGWLKQIVGVKYFNVFG
PNEDHKGDMRSLVNKAYQQILATGRVQLFKSHKPEFKDGEQMRDFLYVKDAVAMTLHFAD
QAPTAAGLFNLGSGEANTWLTLTRAIFAALGREPQIDFIDMPEILRGKYQYFTRADVAKL
RDTGYRRPMTALPEAVRDYVQNYLVPSRKLGD
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgagcactctcacgggtcggattttagttacaggaggcgcgggcttcattggcagcgcc
ttgatttgggcgctcaacgagcgaggcgtcggcgatatcgtcgtaacggattttctgggt
gccgacgagaaatggaaaaacctcacgccgttgcgattcgccgactacgtggaagccgat
gtcttccgccgtcagatcgcagatcgcgcccacgcattcgggaagttttcggctgtattt
catctcggcgcctgctcggccacgaccgagcgcaacgccacctacctcatcgacaacaat
tacgcctacacgaaggaactcgctgcgtgggccctcgcacaaaacgcccgcttcatctac
gcttcctcggccgcgacgtatggtgacggagcccaaggcatggatgatcgcgatgacaat
ctctcccgattgcgtccgctcaacatgtatggctattcgaaacatcttttcgatgtgcac
gcgcagcacagcggttggttgaaacagattgtgggcgtaaaatacttcaatgtgtttggc
ccgaacgaggatcataagggcgacatgcgctccctcgtaaacaaagcctaccaacagatc
ctcgccacgggacgggtgcagttgttcaagagccacaagccggagttcaaggatggcgaa
cagatgcgcgacttcctctacgtcaaagatgcggtcgccatgacgctgcactttgccgac
caagcgcccacggcggccgggctgttcaacctcggctcgggcgaggccaatacatggctc
acgctcactcgcgctatcttcgcagcccttgggcgcgaaccgcagatcgacttcatcgac
atgcctgagatcctgcgcggcaagtaccagtacttcacccgcgccgatgtcgctaaattg
cgggatacaggctaccgccgccccatgacggcgttgcccgaagccgtgcgcgattacgtg
caaaactacctcgtgccctcacgcaaactcggggattaa
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