Osmia lignaria (orchard mason bee): 117605727
Help
Entry
117605727 CDS
T09775
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase isoform X1
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
olg
Osmia lignaria (orchard mason bee)
Brite
KEGG Orthology (KO) [BR:
olg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
olg03016
]
117605727
Enzymes [BR:
olg01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
117605727
Transfer RNA biogenesis [BR:
olg03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
117605727
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TraT
Motif
Other DBs
NCBI-GeneID:
117605727
NCBI-ProteinID:
XP_034183273
LinkDB
All DBs
Position
Unknown
AA seq
541 aa
AA seq
DB search
MLAPCQDIIEDIEDLISSQDITPKERYSSRKNVTFRPKRMQLHEELPQPPVFDSIVPGTQ
TIYVKTWGCTHNNSDSEYMAGQLAAYGYRLTEDKHKADLWLLNSCTVKSPSEDHFRNEIE
VGRKQGKHIVLAGCVPQGAPKSSFLQGLSVIGVQQIDRVVEVVEETLKGNTVRFLQQKKE
AGKKVGGASLRLPKVRRNPLIEIIAINTGCLNQCTYCKTKHARGELGSYPPEEIVERATQ
AFNEGVCELWLTSEDTGTYGRDIGTSLPELLWKLIEVVPDGCMIRLGMTNPPYILEHLEE
MSKILRHPKVYSFLHVPVQTGSDQVLADMKREYTCADFEMVVNFLRERVPGLTIATDIIC
GFPTETEQDFEETMKLCERHKFPSLFINQFFPRPGTPAARMQKVPTQDVKKRTKRLSEFF
QSYFPYDDNRVGIIQDVLVTEISHDKKHYVGHNKSYEQILVPLKEGYLGKMIKVKILETT
KYSMKGEPTNEGISPSVKQCLPKGTVSGIPIEMKPSKYRIAAILTIFVAVFLRLLWKFLN
V
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgttagctccgtgtcaagatattatagaagatatagaagatttaatatcatcacaagat
attacacccaaagaacgttatagttccagaaagaatgtcacatttcgtccaaagcgtatg
cagttgcacgaggaattaccacaacctcctgttttcgacagtattgtgccaggaacacaa
acgatttacgtaaaaacttggggatgcactcataacaattctgacagtgaatatatggca
ggtcagcttgctgcctatggttacagattgacagaagacaaacataaagcagacttgtgg
ctgttgaattcttgtacagtaaagagtccatccgaagatcatttcagaaacgaaatcgaa
gttggaaggaaacaggggaaacatattgtacttgccggatgtgtaccacagggtgccccc
aagtcatcttttctacaagggttaagcgtaatcggcgtacagcagatcgaccgtgtggtg
gaagtggtagaagaaacattgaaaggaaacacggttcgatttttacagcagaaaaaagaa
gctgggaaaaaagttggcggtgcttcgctgaggttgccgaaagtccgaagaaatccctta
atagaaattatagccattaatacgggttgcttaaatcaatgcacttactgcaaaacgaaa
catgcgagaggggaattgggaagttatccccctgaagagatcgttgaaagagctacgcaa
gcgttcaacgaaggagtttgcgaattatggcttacgtccgaggacacgggcacctatggc
agagatattggtacaagtttgccagaattgctgtggaaattgatcgaggtggtgcctgat
ggttgtatgattcgccttggaatgaccaatccaccctacattctagaacatctggaggaa
atgagcaagattttgagacacccgaaagtctacagtttccttcacgtaccggtacaaact
gggagcgaccaagtattggcagacatgaagcgagaatacacttgcgccgattttgaaatg
gtcgtaaactttctacgggaacgtgttccaggattaaccatagcgacggatattatttgc
ggttttccaacggaaacagagcaggacttcgaagagacgatgaagctttgcgaaagacat
aaatttccaagtttgttcatcaatcagttcttccctcgaccgggtacacccgctgctcga
atgcagaaagtacccacgcaagatgtaaagaagagaacgaaaaggttgtcggaatttttc
cagtcctactttccgtacgatgataatagagttggtattattcaagatgtgctggtcacg
gaaatatctcacgataaaaagcactacgttggtcacaataaatcgtacgaacagattttg
gtgcctttgaaagaggggtacttgggaaagatgattaaagtgaaaatcctagaaacaacg
aaatattcgatgaagggagaaccgacaaacgaaggtatctctccgtcggtaaaacagtgc
ttacctaaaggaactgtgtctgggataccgatcgagatgaaaccgtctaaatacagaata
gcggcaattctgacgatttttgttgcagtctttctcagactgttatggaagtttttaaat
gtttaa
DBGET
integrated database retrieval system
