Ostreococcus lucimarinus: OSTLU_14633
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Entry
OSTLU_14633 CDS
T01029
Name
(RefSeq) predicted protein
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
olu
Ostreococcus lucimarinus
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
olu03016
]
OSTLU_14633
Enzymes [BR:
olu01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
OSTLU_14633
Transfer RNA biogenesis [BR:
olu03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
OSTLU_14633
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TraT
SPL
Motif
Other DBs
NCBI-GeneID:
5000778
NCBI-ProteinID:
XP_001416674
JGI:
14633
UniProt:
A4RUI0
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Position
3:join(480620..482047,482192..482243,483205..483275)
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AA seq
516 aa
AA seq
DB search
MEAVVDARARRRGGAGGDGEGEGEGGGEGGGGRRPGTAKIFVHTFGCSHNHSDSEFMAGQ
LRRYGYELVDAPEKADGWLVNTCTVKNPSQSAMNTVIERGKAANKAMVIAGCVPQGDKGA
KELRDVSLLGVTQIDRVVEAMERTLAGDTVRMLEKKALPSLDLPKVRRNEFVEILPLSTG
CLGACTYCKTKHARGDLGSYEISALVSRVEQAMAEGVSEVWLSSEDTGAYGIDLGTDVAA
LFRAITAVLPTDGSVMLRLGMTNPPYILAHLDAVAEAMRHPSVYAWMHIPVQSGSNAVLE
GMKREYTVEEFKRVCDTLLAAVPGMVIATDIICGFPGETDEQWQETMSLIEEYKFPEVHI
SQFYPRPGTPAAKMKRVPTQIVKARSRELTALFESYMPHEHLVGKTERVWVSDIARDGTS
LVAHTKNYTQILLPGGEDQRARLMGRSAMVEIYEAARWSCKARVLEVLEVDPTVARTTAL
YARYFTIEAALVAADDFAFPLHDAAVHALLHKLTHR
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggtggtggacgcgcgcgcgcgacggcgggggggggcgggcggtgacggcgaa
ggcgaaggcgaaggcggaggcgaaggcggaggcgggcgccggccggggacggcgaagatt
ttcgttcacacgtttgggtgctcgcacaatcactcggattcggagttcatggcgggacaa
ttgcggcggtacgggtacgaactcgtggacgcgccggagaaggcggatgggtggttggtg
aatacgtgcacggtgaagaatccgagccagagcgcgatgaacaccgtcatcgaacgaggc
aaagcggcgaataaagcgatggtcatcgcgggatgcgtgccgcagggcgataagggtgcg
aaggagttacgagatgtcagcctgttgggcgtgacgcagattgatcgcgtggtggaggcg
atggagcgaacgttggcgggcgacaccgtgcggatgctggagaagaaagccttgccctcg
ctcgatttgccaaaggtgcgacggaacgagttcgtggaaatactgccgttaagcacgggc
tgtttaggtgcgtgtacgtattgcaagacgaaacacgcgcgcggtgatctcgggtcgtac
gagatttctgcgttggtgagtcgagtcgaacaagcgatggcggagggcgtctcggaagtg
tggctgtcttcagaagacactggcgcgtatgggatcgatttgggcaccgatgtcgccgca
ttatttcgcgccatcactgcggttttgcccacggatgggtcggtgatgcttagactcggc
atgacgaacccaccgtacatcttggcgcacctcgacgccgtcgccgaagcgatgcggcat
ccatcagtgtacgcctggatgcacattccggtacagagtggatccaacgctgtcttggag
ggcatgaagcgcgagtacacggtggaagaattcaaacgcgtgtgcgatacgttgctcgcc
gccgtgccaggcatggtcatcgcgacggatatcatttgcggtttcccgggggaaaccgac
gagcaatggcaagaaaccatgagcctgattgaagaatataaatttccagaggttcacatt
tcgcagttctatcctcggcctgggactcccgcggcgaagatgaagcgagtgccgacacaa
atagtcaaggcacgttcgcgcgagctcacagcgctcttcgagtcatacatgcctcacgag
cacttggttggtaaaaccgaacgcgtttgggtgagtgatatcgcgcgcgacggcacatcg
ctcgtcgctcatacgaaaaactacacacaaatactcttacctggaggcgaagaccaaaga
gcgcgcttgatggggcggagtgccatggttgaaatttacgaagcggcccgttggtcttgc
aaggcgagagttttagaagtcttagaagttgatcctaccgttgccaggacgacagcattg
tacgcgcggtactttacgattgaagccgctttagtcgccgccgatgactttgcttttcca
ctgcacgatgccgcagtccatgccctccttcacaaacttactcaccgctaa
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