KEGG   Ostreococcus lucimarinus: OSTLU_24022
Entry
OSTLU_24022       CDS       T01029                                 
Name
(RefSeq) predicted protein
  KO
K03018  DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6]
Organism
olu  Ostreococcus lucimarinus
Pathway
olu03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:olu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    OSTLU_24022
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:olu03021]
    OSTLU_24022
Enzymes [BR:olu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     OSTLU_24022
Transcription machinery [BR:olu03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Core subunits
     OSTLU_24022
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4
Other DBs
NCBI-GeneID: 5000072
NCBI-ProteinID: XP_001416093
JGI: 24022
UniProt: A4RTE2
LinkDB
Position
2:join(176166..180317,180516..180551)
AA seq 1395 aa
MPTFRDDMAGSSHDTAAIDFTKTPFAPASTPRKISAVRFSLMSSSEIGRAGVFHVFERNL
YQMPQRTPMPNGILDPRMGTTDKRGGECATCRGNMVDCAGHFGYIKLELPVFHIGYFKNI
ISVLQCVCKNCSRILLNEDDQDMFLKRYRNPRLEITQRRLLYKKLTEKCKRCRTCPHCGD
YNGVTKRAGQTLKIVHEKYSKNPALLEEFMKEFETALKYNEQLRASLPKVQDDLNPIRVL
GILQRVTSADCELLDIADRPEHLLLTHLPVPPCCIRPSVEMDGVSGSNEDDITMKLIQII
EVNNVLRQGLEKGLAVNNMMENWDFLQIQCAMYINSELPGLSLQYQGPGKPLRGFVQRLK
GKQGRFRGNLSGKRVDFSARTVISPDPNLRIDEVGVPIHIAKTMTYPEVVNKHNMVMLRE
RVRNGMAKHPGANFVKFASGGMQYLKYGDRRKIASELKFGDIVERHLHDGDILLFNRQPS
LHKMSIMAHKARIMECRTLRFNECVCTPYNADFDGDEMNIHCPQTEEARAEAMQLMGVQH
NLCTPKNGEILIAATQDFLTAAFLLTIKDAFFDRSQFGSLVAYMGDALLSVDLPTPAILK
PIELWTGKQVFSVLIRPKASDHIYVNLEVAEKLYNKKDKTMCPDDGYVCIQNSEIISGQL
GKATLGSGNKSGLFYVLNIEYGAEAAANAMNRLAKLSARWLGTRGFSIGIDDVSPAAELS
AEKGRRIEDGYRTCDERIASYEKGTLPLQAGCNAEETLEAEVLGVLSAVREAAGNACLKA
LPRRNAPLIMALCGSKGSTINISQMIACVGQQAVGGSRPPDGFAERSLPHFRRGEKTPAA
KGFVANSFFSGMRPTEFFFHTMAGREGLVDTAVKTAETGYMSRRLMKALEDLSLQYDGTV
RNSMGGIVQLRYGDDGMEPTMMESEDAQPIEFKRCLMNVRGLNSARGEPPATRSALDAAL
DQFKRNNRIINVDEEGESAETRELVYSAGISQLFYENMRTFIINEVESPSDGVYMSDRQM
KAFLDACARKYTEKRIEPGTAVGAIGAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIK
EIINASKNISTPIITASLMSDRDVKAARVVKGRVEKTTLGEICSEINIVVRPHDLYLELM
LDMEAINQLQLDVTIHSVRLAVLGAPKLKLKPQHVLIAGENILHVLPSEEALIEKRALFT
LQHMRLAIPAVIVQGIPSVGRAVINDKGDGTYNLIVEGVNLQSVMGIEGIKGTETRTNHV
MECERTLGIEAARACIIEEIDSTMGAHGMSIDNRHSMLLADVMTYKGEVLGITRFGMAKM
KDSVLMLASFEKTTDHLFDAALHGRTDYIDGVSECIIMGIPMPIGTGMFRLQHRAMKLEV
DINLGVSQMSRSCER
NT seq 4188 nt   +upstreamnt  +downstreamnt
atgccgacgttccgggacgacatggcggggtcatcgcacgacaccgcggcgattgatttc
acgaagacgccgttcgcgccggcgtcgacgccgagaaagattagcgcggtgcggttttcg
ctgatgagctcgagcgaaatcggacgcgcgggggtgtttcacgtgttcgaacggaatttg
tatcagatgccgcagcgaacgccgatgccgaacgggatattagatccgagaatggggacg
acggataagcgcggtggggagtgcgcgacgtgtcgagggaacatggtggattgcgcgggg
cactttgggtacatcaagctggagctgccggtgtttcacatcggatactttaaaaacatc
atcagcgtgttgcagtgcgtgtgcaagaattgctcgcggattttactgaacgaggatgat
caagatatgtttttgaagcgctatcggaatccaagacttgagattacgcagaggcgtctg
ctgtacaaaaagttgacggaaaagtgcaaacgatgccgaacgtgtccgcattgcggagat
tacaacggcgtgaccaagcgtgcggggcagactttgaagatcgttcacgaaaagtatagt
aaaaacccagcgttgttggaggagtttatgaaggagtttgaaacagctttgaagtacaac
gagcagcttcgagcgtcactgccaaaggtgcaagacgatttgaatcccattcgtgtgttg
ggcatattacagcgcgtcacttcggccgattgcgaattactagacatcgcagatcgaccg
gaacacttgctcttgacgcacctgcccgttccgccgtgttgcatcaggccttcggtggag
atggacggcgtgtcagggtcaaacgaagacgatatcacgatgaagctcatacaaatcatc
gaagtcaacaatgttttgcggcaaggcttagagaaagggctcgctgttaacaatatgatg
gagaattgggattttttacagattcaatgcgccatgtacatcaacagcgagcttcccggt
ttatctctgcagtaccagggccctggtaagccgctgcgcggctttgtgcaaagactcaag
ggtaagcaagggcgcttccgcggtaacctcagcggtaagcgcgtagacttcagtgcgcgc
actgtgatctcaccagatccgaatcttcggatcgacgaggttggtgtaccaatacatata
gcgaagacaatgacatacccagaagtcgtcaacaaacacaacatggtgatgctgagagag
cgcgtgcgcaatggtatggcgaagcatcctggagcgaactttgtcaagtttgcgtctggt
ggtatgcagtacttgaagtacggcgatcgtcgcaagattgccagcgagttgaaattcgga
gacattgttgagcgacatttgcacgacggcgacattctgttgttcaatcgtcagccgagt
ttacacaagatgtcaatcatggcgcacaaggcacgtatcatggagtgccgaactctacgt
tttaacgagtgcgtgtgtacgccgtacaacgccgatttcgacggtgacgagatgaatatt
cattgccctcaaacggaagaagcgcgcgccgaagcgatgcaacttatgggagtgcaacac
aacctgtgcacaccgaaaaacggcgagattctcatcgcagcgacgcaggacttcctaact
gcagcgtttcttctcaccattaaggatgcgttttttgatcgctctcagtttggctcgctc
gtcgcgtacatgggtgatgcgctcctttccgtggatcttccgacgccagcaatcttgaaa
cccattgagctgtggactggaaagcaagtgttcagcgttctcattcgaccgaaagcgtcc
gatcacatatatgttaatcttgaagtcgctgaaaagctgtacaacaagaaggacaaaaca
atgtgtcccgacgacgggtacgtgtgcattcagaatagtgaaataatctcagggcaactc
ggcaaggcgacactcggtagtggaaataaaagtggactattctacgtgctcaacatagaa
tacggcgccgaagccgccgcaaatgcgatgaatagactcgccaagctgagcgctcgatgg
ctgggtacgcgcgggtttagcattggcatcgacgacgtctcaccggccgcggagttgtca
gccgaaaagggccgacgtatcgaggacggctacagaacttgcgacgaacgaatcgcttcg
tatgagaaaggtactttacctcttcaagcgggctgcaacgcggaggaaacgttggaggct
gaagttctcggggtcttgtctgcggtgcgcgaagccgcggggaacgcgtgtttaaaggcg
ctgccgcgtcgcaacgcaccacttatcatggctctttgcggcagtaagggtagcacgatc
aacatttctcagatgatcgcgtgtgttggtcaacaagctgtgggaggctcgcgacctcct
gacggtttcgccgagcgatcgctcccgcatttcaggcgcggagaaaagacacccgccgca
aagggctttgtcgccaactctttcttttctggcatgcgaccgacggaattcttcttccat
accatggctggtcgtgaaggtctcgtcgatactgccgtaaagactgcagagactggatac
atgtctcgtcgtctcatgaaggcgctagaggacctatcgcttcagtacgacggcactgtg
cgcaactcgatgggtggcattgtgcagctgcgctacggcgacgacggcatggaaccgact
atgatggagagtgaagacgcccaaccgatcgagtttaagcggtgtttgatgaatgtgcga
ggtctgaactcggcacgaggcgaaccgccagcgactcgctcggcgttagatgcggcgctg
gaccagttcaagcgaaacaacagaattatcaatgtcgacgaagaaggcgaaagcgccgag
acgcgcgaactcgtgtacagcgctggtatctcgcaattattctacgaaaacatgagaaca
ttcatcatcaacgaagtggagtcgccttcggatggcgtatacatgtcggatcgacagatg
aaggcatttttggacgcgtgcgcgcgaaaatacactgaaaaacgaattgagcccggcacc
gcagttggcgccattggcgcacaatccatcggcgagccaggcacacaaatgacgctgaag
acgttccatttcgccggtgtggcgtcgatgaacatcaccctcggcgttcctcgaattaag
gaaatcatcaacgcgtccaagaatatcagtacgccaatcatcacggcgtcgctcatgagc
gacagggacgtcaaggcggcgcgcgtggtgaagggtagagtggagaagacgacgttgggc
gaaatctgttccgaaatcaatattgtcgttcgtccgcacgatctttacctcgagcttatg
ttagatatggaggcgatcaatcaacttcagttggacgtcaccattcactccgtgcgcctg
gctgtgctcggggcgccaaagctcaagctcaagcctcaacacgtgctcatcgccggcgag
aatatcttgcatgtcttaccctcggaagaagcactgatagaaaaacgcgcgttgttcact
ctgcagcacatgcgactggccattcccgccgtcatcgtgcaaggcatcccatccgtcggt
cgagccgtcatcaacgacaagggcgacggaacgtacaacctcatcgtggaaggcgtgaac
ttgcagtccgtcatgggtatcgagggcatcaagggaacagagacacgaacaaaccatgtc
atggagtgtgaacgcacgctaggcatcgaagcggcgcgcgcgtgcatcattgaagagatt
gacagcacgatgggcgctcacggcatgtcaatcgacaaccgacactcgatgttgctcgcc
gacgtcatgacgtacaagggcgaggttctcgggatcacgcgtttcggcatggcaaagatg
aaagactctgtactcatgttggcttcgttcgagaaaactacggatcatctgttcgacgca
gcgctgcacgggcgcacggattacatcgacggcgtctccgagtgcatcatcatgggcatt
ccaatgcccatcggcacggggatgttccgcttgcagcaccgcgcgatgaaactcgaagtt
gacatcaacttgggcgttagccaaatgtcgcgatcgtgcgagcgatga

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