Oenanthe melanoleuca (Eastern black-eared wheatear): 130248866
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Entry
130248866 CDS
T09236
Symbol
CDKAL1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oma03016
]
130248866 (CDKAL1)
Enzymes [BR:
oma01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
130248866 (CDKAL1)
Transfer RNA biogenesis [BR:
oma03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
130248866 (CDKAL1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Motif
Other DBs
NCBI-GeneID:
130248866
NCBI-ProteinID:
XP_056338870
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Position
2:89052032..89428367
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AA seq
582 aa
AA seq
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MPAACESVLEDIEDIVSAEDLKPHDRHFVRKNVFPKVRKRNSQKNVQADDEPPSDSIIPG
VQKIWIRTWGCSHNNSDGEYMAGQLAAYGYKITDDSAEADLWLLNSCTVKNPAEDHFRNS
IKKAQEGKKKVVLAGCVPQAQPRQEYLKGLSIIGVQQIDRVVEVVEETIKGHSVRLLGQK
KDNGKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGDLASYPIEELVGRA
KQSFQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWKLVEVIPEGAMLRLGMTNPPYILEHL
EEMAKILNHPRVYAFLHIPVQSASDSVLMDMKREYCVADFKQVVDFLKEKVPGITIATDI
ICGFPGETDEDFQETMKLVELYRFPSLFINQFYPRPGTPAAKMPQVPAAVKKQRTKDLSQ
LFHSYNPYDHKVGERQRVLVTEESFDSNYYVAHNPFYEQVLVPKDPLLMGKMVEVNIYEA
GKHFMKGQPVSDARVHTASISRPLAKGEVSGLTEEFRRSAQNGTNWKAQPSAEIPGKTQP
SSCMALQLPWQQGGSGLKILSVSLALLAVLVMFYYGGMKTEL
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgcctgtgagtcagtgcttgaggatatagaagacattgtgtcagcagaagat
ctgaagccacacgatcggcactttgtgaggaagaatgttttccccaaagtgcgaaaacgc
aactcccagaaaaacgttcaggcagatgatgagcctccaagtgacagcattattcctggt
gttcagaaaatctggattcgtacatgggggtgttctcacaataattcggatggtgaatac
atggctggacagctggctgcatatggatacaaaattacagatgattctgctgaagcagat
ttatggttgctgaacagttgtacagtaaaaaatcctgctgaagaccacttcagaaactca
atcaagaaagcccaagaagggaagaagaaagttgttctggcaggctgtgtaccccaagcc
caacctcgccaggagtacctgaaaggcttgagtattataggggttcagcagatagatcgt
gtagtagaagttgtggaggaaactattaaaggtcattctgtgagactgctgggtcagaaa
aaggataatggaaaacgtttggggggagcacgactggatttgccaaagattaggaagaat
ccactgatagaaatcatttcgatcaatacagggtgtctcaatgcatgtacctactgtaaa
actaagcatgccagaggagatctagcaagttatcctattgaagaactggtgggcagagcc
aagcagtcttttcaagagggtgtttgtgagatatggctgaccagtgaagacacaggggct
tatggcagagacattggcacagacctccccacgcttctctggaagctggttgaagttatt
cctgagggagctatgctgaggcttggcatgacaaaccctccctatattttagagcatctg
gaggaaatggccaagattctgaatcatccaagagtatatgcttttctgcacataccagtc
cagtcagcctctgacagtgtgctcatggacatgaaaagagaatattgtgtggcagacttc
aaacaagtagtggatttccttaaagaaaaagtgcctggaataacaattgctacagacatc
atttgtggttttccaggagagacagatgaagattttcaagaaactatgaaacttgtagaa
ctgtacaggtttccaagcttgtttatcaatcaattctacccacgtcctggaaccccagct
gcaaaaatgcctcaagttccagctgcagtgaaaaaacagagaacaaaggatctgtcccag
ctgtttcattcatacaatccatatgatcataaggttggtgagagacagagagttctggtt
acagaagaatcctttgactccaattactacgttgctcacaatcctttttatgagcaggtt
cttgtgccaaaggatcctctgttaatgggtaagatggtagaagtgaatatttatgaagct
gggaaacattttatgaaggggcagccagtatcagatgccagagttcacactgcatccatc
agtagaccgttagcaaaaggagaagtttctggtttaacagaggagttcagacgttcagcc
cagaacggcacaaactggaaagcacagccttctgctgagatcccagggaaaacacagccc
agctcctgcatggctttgcagctcccatggcaacaagggggaagtggactgaagatcctg
tctgtcagcctggctctgctggcagtccttgttatgttttactacggaggaatgaaaaca
gaactgtga
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