KEGG   Oenanthe melanoleuca (Eastern black-eared wheatear): 130257794
Entry
130257794         CDS       T09236                                 
Symbol
POLR2C
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3
  KO
K03011  DNA-directed RNA polymerase II subunit RPB3
Organism
oma  Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma03020  RNA polymerase
oma03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:oma00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    130257794 (POLR2C)
  09124 Replication and repair
   03420 Nucleotide excision repair
    130257794 (POLR2C)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:oma03021]
    130257794 (POLR2C)
   03400 DNA repair and recombination proteins [BR:oma03400]
    130257794 (POLR2C)
Transcription machinery [BR:oma03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     130257794 (POLR2C)
DNA repair and recombination proteins [BR:oma03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      130257794 (POLR2C)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L
Other DBs
NCBI-GeneID: 130257794
NCBI-ProteinID: XP_056356621
LinkDB
Position
11:complement(6282522..6288239)
AA seq 275 aa
MPYANQPTVRITELTDENVKFIIENTDLAVANSIRRVFIAEVPIIAIDWVQIDANSSVLH
DEFIAHRLGLIPLTSDDIVDKMQYSRDCTCDEFCPECSVEFTLDVRCNEDQTRHVTSRDL
ISNNPRVIPVTSRSRDNDPNDYVEQDDILIVKLRKGQELRLRAYAKKGFGKEHAKWNPTA
GVAFEYDPDNALRHTVYPKPEEWPKSEYSEIDDEDAQAPYDPNGKPERFYYNVESCGSLR
PETIVLSALSGLKKKLSDLQTQLSHEIQSDVLTIN
NT seq 828 nt   +upstreamnt  +downstreamnt
atgccgtacgccaaccagcccaccgtgcgcatcaccgagctgacggacgagaacgtcaag
ttcatcatcgagaacacggacctggcggtggcgaattccattcggagagtgttcatcgca
gaagtccccatcatagccattgactgggtccagatagatgccaactcctccgtgctccac
gatgagttcattgcacaccgactgggtctcattcccctcaccagtgacgacattgtggat
aagatgcaatattccagagactgcacgtgtgatgagttctgccccgagtgctccgtggag
ttcacgctggacgttcgctgcaacgaggaccagactcggcacgtgacgtcccgcgacctc
atctccaacaacccccgcgtcatcccggtaacatctcggagcagagacaacgaccccaat
gactatgtggagcaggatgacatcctgatcgtgaagctgcgcaaggggcaggagctgcgg
ctgcgggcctacgccaagaagggctttggcaaggagcacgccaagtggaaccccacggcc
ggcgtggccttcgagtacgaccccgacaacgcgctcaggcacaccgtgtaccccaaacct
gaggagtggcccaagagtgagtactcagagatcgacgatgaggatgctcaggctccctat
gaccccaacgggaagccagagaggttttattacaacgtggagtcctgcgggtctctgcgc
cccgagaccatcgtcctgtcagccctgtccggcctcaagaagaaactgagcgacctgcag
acacagctgagccacgagatccagagcgatgtcctcactatcaactga

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