Onychostoma macrolepis: 131526666
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Entry
131526666 CDS
T09350
Symbol
rev3l
Name
(RefSeq) DNA polymerase zeta catalytic subunit isoform X1
KO
K02350
DNA polymerase zeta [EC:
2.7.7.7
]
Organism
omc
Onychostoma macrolepis
Pathway
omc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
131526666 (rev3l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
omc03400
]
131526666 (rev3l)
Enzymes [BR:
omc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
131526666 (rev3l)
DNA repair and recombination proteins [BR:
omc03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
B-family DNA polymerases
131526666 (rev3l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4683
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
Motif
Other DBs
NCBI-GeneID:
131526666
NCBI-ProteinID:
XP_058611012
LinkDB
All DBs
Position
20:116980..190572
Genome browser
AA seq
3023 aa
AA seq
DB search
MFSVRIVTADYYMSSPIRELDVCYSEFRENDVKKVPVVRIFGATPAGQKTCLHLHGVFPY
IYVPYDGFGQDADRYLRQVAYSIDRALNVSMGNPSSNVQHIFKVVLVSGMPFYGYHMKEK
TFMKIYLYNPQMVKRVSELLQGGAVMNKSFQPHEAHIPFLLQLFIDYNLYGMNMISLAAV
KFRKNHATGGEHMSNRGGISSPYKYPCTSKLSDGGLRDTMRWEDDNIPSSLILEEVERMS
VCELEVDAVAADVLNRLEIENQIGRNPGLQAIWDDEKQRRQERCQSSHIDMPESQDRGFV
EFAESEKIFMKRFKEILKENEFDMTQSGSEVDSFPELSLYSTVLSPDDLPCIPASQVDVH
QDAFKDTKMHGGKDAEVAVVDEEAILSLLENSQTFLPHSQGPNQSAILGSSQDQAIVDLF
EALADDGFRADRSRAVSQQLPGIASCICNSDDDEAGPELEKEESELSRIMSQRWDCDMPG
PCAGQRSPDFSLCMKEANESSSEEQQASSDEEIYWKGNSALRTDLSIPQLDGAADENSDS
SLTDKESRTRSSLKATDKILGSRNVFPNEAVRMEPPSSAKIVIEYKCAEQKLNQEDLAER
QLKSEEANEYSTGLRVNKEVPYIPPVKHPITFKTANIPKLGAEKIGVHSLYTDENQATGL
NQLDPDDSIFGNSKLAQSIKNYTSIKNVEKNHLSIPENHKSFFVCYSELMNCPTKTEMQL
SPNDCRRPVISFDQTQSPLEESQSLGPQEGETGQDKKEEDVSKLKIKYEDYQENKTERTI
VAQQEAHYKFFPSVILSNCLSRPIKKQTGSKTGDSCSTLDHPEQRRSRLKLIKKKTTLGQ
KRVSPVRITSPMKEEATALLSNALGSLKRKETDKEVDMETSDPPTIEGLIKNSVEDELAD
IPTKISCIKVSSLPGSKYTLRAKRKMSYDSENGDQASSGSFKQTLVQHEGLKGKDHVFSQ
KKRKLTKKEPPIIIKYIIINRFKGQKNMLVKISKINADETCTVLTPEKLAEYKKLAPLKE
FWPKVPESAAVKYPLLEPKVKKCPKRKAKVNPVSKRAGTSPKSRCPRAGQTRRAKHAKAL
ITLPKLPPPWPCYDEFTDDCCTEYSDVMVELGYLSERASSPTDSTPPRCWSPTEPLLGSN
SNLINPHNDPCLGSSYQVLAPKPYQRGLWDRSRTPRSKRTSATSPKRQANTTTKSVNKDS
VTTVDSQRKGIRAASRRHKKRCESIEGIVLEDDTSTSQKDRMLNEKQVPRKKQVQGEESD
NSQAPHSVNSAPITSSPDDLTPYQHPSSLKSSQEDFTISCSGSQTKVTSTGKKSNQDVVF
VFNTIASNDSQKDSQIVLNPCIEKSLNHMLSPSTKTVGHPCSVITYSSSNSISQNMSQDE
TITKNLYKFKSDVSGHEENPRTVQHLQSTRKTTIKSRRPQTKKKDTITLLESVDCRSSLM
PSAKSAVKAGFHTGLTLSSDPKIDEMCVPELPSGLAVLKELLQKRQLKAGQEPHESDHVT
EDMSSTSQPTDTPKTAKSKTAHSSTSRKPRGARTKVPKELQFKIRSNKMKRDDLRIDHLS
SDDSPVFFSDPSFDSCCSMEDSLSPELPDNYSFDINTIGQTEFSCLYSGNQFVLTDRNLP
QKFLSDVSQEAIIALVGLGDRTQKVFDVDESSKHEQDWHKSGALSPELFDKSFCENGKVY
PNKVSLDSEKIFSKDWGGSLGKIHGLSHFQDFHCEKKDVLLDPEPFSPLTSASFAYSGVS
PNSDPLDGSSATPSSSPQSINSLSQLKNGGQSSKSGGTHILKPLMSPPTREEILATLMDL
DLSEATYQEPFCSDPSDAPLKSREVGGRKLILETRLANELVEFHGDLSQNGLQFWKIAFS
AMTNQASAPNNGCKSSILTKDQNPFSGSDQKVIMLPCKCAPSREQVQLWLQAKKQYECLQ
SDRKQVGGQTTVELGTYERTSPQNEDSNLPSSESHDKRWKKNDEKASELQSISRNGLSLP
LHISPVKAASSNSSPKSTKCILDIETNKGCQITSPNSPDLSTLQQRPAEIKQDEDKEDLT
DVLQSPSLDQSQNLNDTSLENVQPKELLSPSVFPVTHLDSDVKCSYLLHSTPVHRRSYID
DDGSSYSPIRNEDIEPRSQRLHQKGNKNKDALRRVLLTTQMKNQLNTMNVPKRENSQIEG
PSICNSYGFKVSMQNLQEAKALHEVQHLTVISMELHARTRRDLEPDPEFDPICALFYCLS
SDVLLPNCDTSQMTGAIVIDKDCCSSAQASRSTAPLLFKSGVTGLPVTYVSDEKELFEEV
TNILRKYDPDILVGYEVQMHSWGYLLQRASTLGVDLCQQLSRVPGDAKENRFMAEKDEYG
ADTMTEIHIVGRVVLNMWRIMKTEASLNNYTFENVAFHLLHQRFPLYSHRTLSDWFDHNT
HLHRWKVVDHYVSRVCGTVQLLQQQDIIGRTSELARVFGIQFYHVLTRGSQYRVESMMLR
IAKPMNYIPVTPSTQQRAQQRAPQCIPLVMEPESRFYSNSVIVLDFQSLYPSIIIAYNYC
FSTCLGRVENLGTCDEFRFGCTSLRVPPDLLYQLRNDITISPNGVAFVKSSVRKGVLPSM
LEEILKTRIMVKQSMKAYKNDKALLRLLDARQLGLKLIANVTFGYTSANFSGRMPSVEVG
DSIVHKARETLERAIKMVNDTKKWGARVVYGDTDSMFVLLKGATKEQAFKIGNEIAEAVT
ATNPKPVKLKFEKVYLPCVLQTKKRYVGYMYESLDQNNPVFDAKGIETVRRDGCPAVAKI
LERSLKLLFESRDISQVKQYVQRQCVKVLEAKASMQDLIFAKEYRGSGSYRPGACVPALE
LTRRMMAYDRRLEPRVGERVPYVIVYGMPGLPLIQLVRRPVEVLQDPSLRLNATYYITKQ
ILPPLARIFNLIGVDVFSWYHELPRVQKAWSSVNGGGEEGTRKGTISQYFTTLHCPVCDE
LTQLGVCEGCRAEPQRVAVHLHQDLRLWESQQDQLLKVCRSCSGSAERQVPCVSLDCPIL
YKLSRVNRNLSRGPYLRQLLEQF
NT seq
9072 nt
NT seq
+upstream
nt +downstream
nt
atgttttcagtgcggatcgtcacggcggattattacatgagcagtccgatcagagagctg
gacgtctgttattctgagttcagagagaacgatgtcaagaaagtgcccgtggtacggatc
tttggggccacaccagcaggccagaagacatgtcttcatctgcatggtgtgttcccatac
atctatgtgccgtatgatgggtttggacaggatgcagatcgttaccttcggcaggtggcc
tacagtattgacagagccctgaacgtcagcatgggaaacccctcgtctaatgtgcagcac
atctttaaagtggttctggtgtctggcatgcctttctacggataccatatgaaggaaaaa
acctttatgaagatttacctgtacaacccacagatggtcaaaagggtgagtgaactcctg
cagggtggagctgtaatgaataagagttttcagccccatgaagctcacattcccttcctg
ctgcagctctttatcgattacaacctctacggcatgaacatgatcagtcttgctgctgtt
aagtttcgaaaaaaccatgcaacaggaggagagcatatgtcaaatagagggggtatctcc
agcccatataagtatccctgcacatctaaactcagtgatggtgggctgagagatacaatg
cgctgggaggatgacaacataccaagttctctgattttagaggaggtggaacggatgagt
gtgtgtgagctggaggttgatgccgtggctgctgatgttctcaaccgcctagagattgag
aatcagattgggagaaaccctggtcttcaggccatctgggatgatgagaaacagcgacga
caggagagatgtcaaagttctcatattgacatgcctgaatcacaagatcgaggctttgta
gagttcgcagagagtgaaaaaatcttcatgaagagattcaaagaaattctcaaggaaaat
gaatttgacatgactcaaagtgggtctgaagttgactctttccctgagctctcactctat
tctactgtgctgagcccagatgacttgccttgcatacctgccagccaagtggatgtgcat
caagatgcatttaaagacacaaaaatgcatggtgggaaagatgcagaagtggcagttgtt
gatgaagaggccattttgagtttgttggaaaacagtcagaccttcctccctcattctcag
ggacccaaccaatcagcaatacttggcagcagtcaagaccaggctattgttgatctcttt
gaagcgttggctgatgatggatttagagccgacaggtccagagcagtgtcccagcagctg
ccagggattgctagctgcatctgtaacagtgatgatgacgaagctgggcctgagctggag
aaagaagagtcagagctcagtagaatcatgtcccaaagatgggactgtgacatgccaggg
ccctgtgctgggcaaaggtcaccagacttctcattatgtatgaaagaagcaaatgaaagc
tccagtgaagagcagcaggcctcatcagatgaagagatatattggaagggaaacagtgct
cttcgtactgatctgtccattccacagttggatggagctgcagatgagaatagtgattca
tcactaacagacaaggaatcccggacacgctcatctctaaaagcaacagacaagatcctt
ggtagcagaaatgtttttccaaatgaagctgttcgtatggagccaccatcttctgctaaa
attgttattgaatacaaatgtgctgagcagaaactcaatcaagaggatttagcagaaagg
caattaaaaagtgaagaggcaaatgaatattcaactggattaagagttaacaaagaggtg
ccatatattccaccagttaaacacccaattacttttaagacagcaaatatacctaaactt
ggtgctgaaaaaataggtgtgcactctttgtacacggatgaaaaccaagccactggcctt
aatcagctagatcctgatgattcaatttttggaaactctaagcttgcccagagcattaaa
aattataccagtattaaaaatgtggaaaagaaccatttatccatccccgagaatcacaag
agcttctttgtatgttactctgagctgatgaactgccccaccaagactgaaatgcaactc
agtccaaatgactgcagaagacctgtgataagtttcgaccagacacaaagccctttggaa
gagagccaatctttgggccctcaagaaggtgagacaggacaggataaaaaagaggaagat
gtcagcaaactgaaaataaaatatgaggattaccaagagaataaaactgagaggaccatt
gtggcacaacaggaggcacactacaaatttttccccagtgttattctgtctaattgcctg
tccagaccaatcaagaaacagactgggagcaagactggggatagttgctctaccttagac
catcctgaacagcgaaggtcaaggttaaagttgatcaaaaagaaaacaacattgggtcaa
aaaagggtaagtcctgtgaggataacatctcctatgaaagaggaagccacagcacttctt
tccaacgctctaggctctcttaaacggaaagaaacggataaggaggttgacatggaaact
tcagatccaccaaccattgaaggtttgattaagaactcagtagaggatgaacttgcagat
attcctaccaaaatctcttgcatcaaggtgtccagtttaccaggtagcaaatataccttg
cgggcaaaaaggaaaatgagttatgacagtgaaaatggagatcaggcaagttctggttct
ttcaaacaaactttggtgcaacatgaaggccttaagggcaaagatcatgtcttcagccaa
aaaaagaggaaactgactaaaaaagagccaccaatcatcattaaatatataattattaac
agattcaaaggtcagaagaacatgttagtgaagatttctaaaattaacgctgatgaaact
tgcacagttttaacaccagaaaagcttgccgaatacaaaaagctcgctcccctcaaagaa
ttctggcccaaagtgccagagtctgcagcagtgaagtacccgctacttgagccaaaagta
aagaaatgtcccaaacgaaaggctaaggtgaacccagtgtcaaagagggccggcacctct
ccaaaatctaggtgtccacgagctggtcagactcggagggcgaagcatgcaaaagcactg
ataactttaccgaaattaccccctccatggccttgttatgatgagttcactgatgactgc
tgtacagagtattctgatgtgatggtggagttgggttatttgtcagaaagagcctccagt
cctactgattcaaccccacctagatgttggtcgcctactgagcccttactgggatcaaat
tcaaatctaataaacccacataatgatccatgcctaggttcatcctatcaagtactagct
ccaaaaccataccaaagaggtctttgggatagaagcagaacacccaggtctaaaaggact
tctgctaccagcccaaaaagacaagctaatactacaacaaagtcagtgaacaaagattca
gtgacaactgtggattcacagaggaaaggtattcgagcagcttcaaggagacataagaaa
cgttgtgaaagtattgaaggaattgttctggaagatgacacatctacctctcagaaagac
aggatgctgaatgagaagcaagtcccaagaaaaaagcaggtccaaggtgaggagagtgat
aattcacaggctccacattcagttaacagtgcacctattacttcctcacctgatgactta
actccttatcaacatcccagttctctaaaaagcagtcaagaggactttactatcagttgt
tcaggctctcaaacaaaggtcaccagcactggaaaaaaatcaaatcaagatgttgttttt
gtcttcaataccattgcctcaaatgactcacaaaaagactcacagattgtcctcaatccc
tgtattgaaaaatctctaaatcatatgctttccccatccaccaagacggtaggacatcca
tgttccgtcatcacatacagcagttccaattcaatatcacaaaatatgagtcaagatgag
actatcacaaaaaatctatataaattcaaatcagatgtctctggccatgaagagaatccc
agaactgtacagcatttacagtcaaccagaaaaacgaccataaaatcaagaagaccgcaa
acaaaaaagaaagataccataactttattggagtctgtcgattgtagatcctcccttatg
ccctctgctaagagtgcagttaaagctggatttcacacaggtcttacgttgtcctcagac
cctaaaattgatgaaatgtgtgttcctgagttgccttctgggctcgctgtcttgaaggaa
cttctccagaagaggcaactcaaggcaggacaggaaccacatgaaagcgatcatgtgact
gaggatatgtcttctaccagtcaacctacagatactcccaaaacagccaaatctaaaacg
gctcattcatcaacatcaagaaaaccaaggggtgcaagaactaaagtgccaaaagagtta
cagttcaaaatcagaagtaataaaatgaaacgggatgatttgagaattgaccatctttca
tcagatgacagtcctgtgtttttctctgaccctagctttgacagctgttgctctatggaa
gatagcttgtccccagagctcccagacaattacagctttgatatcaataccattgggcaa
acagagttctcctgtctttattctggtaaccagtttgtgttaactgataggaacttgcct
cagaagtttctcagtgatgtcagtcaggaggcaatcattgcccttgttgggttaggtgac
aggacacaaaaagtgtttgatgttgatgagagcagcaagcatgaacaggactggcataag
tctggggctcttagtccagaactgtttgataagtcattttgtgaaaatggcaaagtttat
cccaataaggtatctcttgattcagaaaagatctttagcaaagattgggggggctcttta
ggtaaaatccatggccttagccactttcaggactttcactgtgaaaagaaagatgtgttg
cttgacccagagcccttttccccccttacttctgcttcttttgcttatagtggtgtttcc
ccaaatagtgatcccctagatggcagttcagcaacaccaagcagttccccacagtccatc
aactcgctgtcccagctgaaaaatggaggtcagagttcaaagagtgggggaactcacatt
ctcaaacctctcatgtctccacctactcgagaagaaatcttagctactctaatggatctg
gacctctcagaagccacctaccaggaaccattctgcagtgacccatcagatgcacccttg
aagtctagggaggttggtggtcggaagttgattttggaaaccaggttggcgaatgaacta
gttgaatttcatggagacttatctcaaaacggcttacagttttggaaaattgcgttttct
gctatgacaaatcaagcctctgcaccaaacaatgggtgtaaatcctctatactgaccaag
gaccaaaacccattttctggcagtgatcaaaaagtgattatgcttccctgcaagtgtgcc
ccaagtcgagaacaggtgcagctctggctgcaagccaaaaaacagtatgagtgccttcag
agtgataggaaacaagtgggtggccagacaactgtggaacttggtacatatgaaaggacc
tcacctcaaaatgaggactctaatttaccatcctcagagagtcatgataaaaggtggaag
aaaaatgatgaaaaggcttcagagttgcagagtatcagtaggaatggcttaagtttacca
ctccatatttcaccagttaaagcagcttcatctaacagtagccctaagagtacgaaatgc
atcttggacatagaaacaaacaaaggttgtcagatcacttctccaaattctcctgatctt
tctacattgcaacaaaggcctgctgagattaaacaagatgaggacaaggaggatttgact
gatgtattacaatcccccagcttggaccagtctcaaaatctcaatgacacatcacttgaa
aatgtacagccaaaggagctcttgagtccatcagtttttcctgttacgcacctagattct
gatgtcaaatgctcttacctgctccatagcacacctgtccaccggagaagctacattgat
gacgatgggtctagctacagtccaataagaaatgaagacatagagcccagatcacagcga
ctacatcagaagggtaacaaaaacaaagatgctttacggagagttttgcttaccacacaa
atgaagaatcagcttaacactatgaatgttccgaaaagagaaaactcccagattgaggga
ccatcaatctgtaattcatatggctttaaagtcagtatgcagaacttgcaggaggccaaa
gcattgcatgaggtacagcacctcacagtgataagcatggagcttcatgcaaggactcgt
cgtgaccttgagcctgaccctgaatttgacccaatttgtgctttgttctactgcctcagt
tctgatgtccttctcccaaattgtgacacttcccagatgacaggtgccattgtcattgat
aaagattgttgttcttcagctcaagcctccaggagcacagcaccgttgctttttaaatct
ggtgtgacaggactgccggtgacctatgtcagtgatgagaaggagctttttgaagaggtc
acaaacattcttagaaaatatgacccagacattctggttggatatgaggtccaaatgcac
tcttgggggtacctactgcaacgtgcatcaacgctcggtgtagacctgtgccagcaactc
tcccgtgtgccaggagatgcaaaagaaaatcggtttatggcagagaaagacgaatatggt
gcagacactatgacggaaatccatattgttggacgtgttgtcctcaacatgtggaggatt
atgaagactgaggcttcattgaataactacacttttgagaatgtggctttccacctcctg
catcagcgctttcctctctacagccatcgcacactctctgactggtttgaccacaacaca
cacctgcacaggtggaaagtggtggatcattatgtgagccgtgtgtgtggcacagtccag
ttgctccagcagcaggatattatcggcaggacaagtgagctggcacgcgtgtttggaatc
cagttctaccacgtgctaaccagggggtcacagtaccgtgtggaatcaatgatgttaagg
attgcaaaaccaatgaattacatcccagtgactccaagcacacagcagcgtgcccagcaa
agagccccacagtgcattccgctcgtcatggagccagagtcgcgtttctatagcaactct
gttattgtgttggatttccagtcactgtatccatccatcatcattgcctacaattactgt
ttctccacctgccttggacgcgttgagaatcttggaacgtgtgatgagttcaggtttggt
tgtacatctctcagagtccctcctgacctcctttaccagctcagaaatgacatcaccatt
tctcccaatggtgtcgcatttgttaagtcatcagtgcggaagggtgtcctgccaagtatg
ctggaggagatcttgaagacgaggatcatggtgaagcagtccatgaaggcgtacaaaaat
gacaaagctctattacgcctgctggatgccaggcagcttggccttaaacttattgctaat
gtcacatttggttacacttctgccaacttctcaggacgtatgcccagcgttgaggtaggt
gacagcattgtgcacaaggcccgagagactttggagagagccataaagatggtcaatgac
acaaagaagtggggagcacgtgttgtctacggagatacagacagtatgtttgtgttgttg
aaaggagcaaccaaggaacaggcatttaagattggtaatgaaattgcagaggctgtcact
gctaccaaccctaaacctgtcaaattgaagtttgagaaggtgtacctcccatgcgtgtta
cagacaaagaagcgttatgttggatacatgtatgagagcttggatcagaacaacccagtc
tttgacgccaaaggcattgaaactgtacgtcgtgatggctgccctgctgttgccaagatt
ctggagcgatctctgaagctgctttttgagtcacgtgacatcagccaggtgaagcagtat
gtgcagcggcagtgtgtgaaggtgctagaggcaaaagccagcatgcaggacctcattttt
gccaaagagtaccgcggcagcggatcgtaccgaccaggggcctgtgtccctgctctggaa
ctcaccaggcgaatgatggcgtatgatcgacgtttagagccacgcgtgggtgagcgtgta
ccgtatgttattgtgtacgggatgccaggactgccgctcatacagctggttagacgtcct
gtagaggtactgcaggaccccagtctgcgcctcaatgcaacctactacatcaccaagcag
atcttgccaccgctcgcacgaattttcaacctgattggagtagatgtgttcagctggtac
cacgagttgccgagggtacagaaggcatggagctctgtgaatggaggcggggaggagggc
acaagaaaaggcaccatctctcagtactttacaacgctgcattgtccagtttgtgatgag
ctgacacagctaggagtgtgtgaaggttgtcgggctgaaccccaacgtgttgcggtccac
ctacaccaagacctgcggctttgggaaagccagcaagaccagctcctaaaggtatgtaga
agttgcagtgggagtgcagagcgtcaggtgccatgcgtctcattggactgccctatactc
tacaaattatctcgggttaatcggaatctttcccgaggaccatatcttcgccagctgctg
gagcagttctga
DBGET
integrated database retrieval system
