Onychostoma macrolepis: 131550821
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Entry
131550821 CDS
T09350
Symbol
prdm9
Name
(RefSeq) histone-lysine N-methyltransferase PRDM9
KO
K20796
[histone H3]-lysine4 N-trimethyltransferase PRDM7/9 [EC:
2.1.1.354
]
Organism
omc
Onychostoma macrolepis
Pathway
omc00310
Lysine degradation
omc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
131550821 (prdm9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omc03000
]
131550821 (prdm9)
03036 Chromosome and associated proteins [BR:
omc03036
]
131550821 (prdm9)
Enzymes [BR:
omc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
131550821 (prdm9)
Transcription factors [BR:
omc03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
131550821 (prdm9)
Chromosome and associated proteins [BR:
omc03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
131550821 (prdm9)
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
131550821 (prdm9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
PRDM2_PR
zf-H2C2_2
zf-C2H2_4
SET
zf-C2H2_3rep
zf-H2C2_5
Zn-ribbon_8
zf-met
Motif
Other DBs
NCBI-GeneID:
131550821
NCBI-ProteinID:
XP_058649225
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All DBs
Position
12:23440831..23445471
Genome browser
AA seq
852 aa
AA seq
DB search
MSDSPDFPPSDEQNLEIEDAVTNCSSVVMMEEQEDSMFNDQHFYCEMCHQLFIDQCEVHG
PPLFTCDSPTAMGIPQRALLTLPQGLVIGRSSISNAGLGVFNQGQTVPLGMHFGPFDGEV
TSEEKALDSAFSWVIYRGNNQYTYLDAERDTHSNWMKFVVCSRSETEQNLVAFQQNGRIL
FRCCRPISPGQEFRVWYAEEYAQGLGIIWDKIWDKKSISLGPTEDPVSQDCLCPYCHYSF
PTIFYLRVHVKRSHPDEYAHFMQTQPLESVEIDQCLLASDAAPPTHMQPMIESCQGQIST
PDGQPIHQSEKSDCTDLSDTCSNVLSDQANCVAEVSGEMNKCGECGRNFLRSCHLKRHQR
TIHSKEKPYCCSHCRKCFSQATGLKRHQQTHQGEEKREKDADRPSDVYPCTKCSFSFVAK
SNLYQHLKRHHHGEYLRLVESGSLAAGPVGETETSSDKHDPTYEPPTRAKRPVKNTLRGR
SHPKKVSVGRPRGRPPKNKRAAQDEVFICTECEQRFSDLETLKTHQCAGQDNNKIEEPQE
AADSHHVCGECLRSFSNFDLLKAHECIQQGDGSYSCSHCNLYFNRLCNLRRHERTIHSKE
KPYCCTLCLKSFTQSSGLKRHQQSHSRRKAHRQSSALVDASIFPCAYCPFSFTDERYLYK
HIRRHHPEMSVKYLSFQEGGVLSVEKPHSCSQCCKSFSTIKGFKNHSCFKQGEKVYLCPD
CGKAFSWFNSLKQHQRIHTGEKPYTCQQCGKSFVHSGQLNVHLRTHTGEKPFLCSQCGES
FRQSGDLRRHEQKHSGVRPCQCPDCGKSFSRPQSLKAHQQLHNGTKLFPCTQCGKSFTRR
YHLTRHHQKMHS
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacagtccggattttccaccaagtgatgagcagaatttagagatagaagacgct
gttactaattgttcttctgttgtgatgatggaggaacaggaggatagcatgtttaatgac
caacatttctattgtgagatgtgtcaccagctcttcattgaccagtgtgaggttcatggt
ccaccattattcacatgtgactcgccaacagctatgggcattcctcagagagctctgctg
acgctgccgcaaggcttggttataggccgatcaagcatctctaatgcagggcttggggtt
ttcaaccaaggccagactgtgccattggggatgcattttggaccttttgatggagaggtg
acctcagaggaaaaagcattggatagtgccttctcttgggtaatttacagaggaaataat
cagtatacttacctagatgcagagagagacactcactctaactggatgaagtttgtggtg
tgctcaaggagtgagacggagcagaatcttgttgcattccagcaaaatggacgtattctg
ttccgttgttgtcgccctattagcccagggcaggaatttcgagtttggtatgctgaagaa
tatgctcaaggacttggcatcatctgggataagatctgggataagaaaagcatttctcta
ggtccaactgaagatccggtatctcaggactgtctatgtccttattgccattactccttc
ccaacaattttttatttgcgtgttcatgtgaagcgctcgcaccccgatgagtatgcacac
ttcatgcagacacagccgctagagtctgtagagatagaccagtgccttctggcctctgat
gcagctcctccaacccatatgcagccaatgatagaaagctgtcagggtcaaatttcaacc
ccagatggacaacccatccatcagtcagaaaagtcagactgcactgatttgtctgataca
tgcagtaatgttttgagtgatcaagcaaactgtgttgctgaggtctcaggtgaaatgaat
aaatgtggtgagtgtggccgtaactttttgagatcttgtcatctgaagagacatcagcgc
actattcactccaaagagaagccttattgctgcagccattgtaggaagtgctttagtcaa
gcaacaggactgaaaagacaccaacaaacccaccagggggaggaaaagagagagaaagat
gctgatagaccttctgatgtatacccttgcacaaagtgctccttctcttttgtggccaaa
tccaatttataccaacatctgaaacgtcatcaccatggtgagtacctcaggttagttgag
agcggctcgctcgcagcagggcctgtgggtgaaacagagacaagttctgacaagcatgac
ccaacctatgaacctcctactcgagctaagaggcccgtgaagaacactttgagaggcagg
agtcaccctaaaaaagtgtctgttggccgaccaaggggacgaccacctaaaaacaagcgt
gcagctcaggatgaagtgtttatctgcacggagtgtgaacagaggttctctgatttggag
acactaaaaactcaccaatgtgcgggacaggataataataagatagaggaaccacaggaa
gcagcagattctcatcatgtctgcggtgaatgcctgagaagtttcagtaattttgatctt
cttaaagcccatgagtgcattcagcagggagacggatcttactcttgctctcactgcaat
ctttacttcaaccgtttgtgtaaccttcgtcgccatgaacgcaccatccactccaaggaa
aagccctactgctgcaccctgtgcctcaagtccttcacccagtcttctggcttgaagcgc
caccagcagagccactcacgacgcaaagcccaccgccagagctcagcccttgttgatgcc
agcatctttccctgcgcatactgccccttctccttcaccgatgagcgctatctttacaaa
cacatccgccgtcaccatccagaaatgagcgttaaatatctgagtttccaagaagggggt
gttttgtctgttgaaaagcctcacagctgcagccagtgctgcaagagctttagcacaatc
aagggcttcaagaaccacagctgcttcaagcagggggagaaggtgtatctgtgcccagat
tgcggaaaggcattcagttggtttaatagcctcaagcaacaccagcgcatacacacagga
gaaaagccttacacatgtcagcagtgcggcaagagttttgtccactccggacaactgaat
gtgcacctccgcacacacacaggtgaaaaacctttcctgtgttcacagtgtggtgaaagc
ttcaggcagtcaggagatttgaggaggcatgagcagaagcattctggcgtgcgcccatgc
cagtgccctgattgtggaaaaagctttagtcggccacaaagtctcaaagctcaccaacag
cttcataatggcaccaaacttttcccctgcactcagtgtggaaaaagctttactcgtaga
taccatctcacccggcatcaccagaaaatgcactcctga
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