Onychostoma macrolepis: 131552229
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Entry
131552229 CDS
T09350
Symbol
polr1b
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
omc
Onychostoma macrolepis
Pathway
omc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
131552229 (polr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omc03021
]
131552229 (polr1b)
Enzymes [BR:
omc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
131552229 (polr1b)
Transcription machinery [BR:
omc03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
131552229 (polr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
131552229
NCBI-ProteinID:
XP_058651844
LinkDB
All DBs
Position
13:25868830..25877364
Genome browser
AA seq
1132 aa
AA seq
DB search
MDLNKWCNLKSEPSLKHLTEAGFGVPKEKQRVPVQELVKAHIESFDQAVTDGLCRVVEAI
PPMEFMYKGDRIGLSFVEAIIHTPAVGKGGISRDLRVFPAECRGRRCTYRGKLVADVSWS
VNGVPKGIIKQSMGNVPIMVKSKLCNLYGLSPKELIEHHEEAEEMGGYFIVNGIEKVIRL
LIMPRRNYPIAVSRPKFKSRGQGYTQYAISMRCVRDEHTAINMNLHYLDNGTVMVNFIYR
KELFFLPLGFALKALVDFSDYQIYQELIKGREENSFYKSCVSEMLRMVMDQGCMTKAKVL
NYLGERFRVKLLLPDWFTHEQCAHFLLDECLCIHLKSDVEKFYMLCLMTRKLFSFAKQEC
MEENPDSLMFQEVLTPGQLYLMFLKEKMAGWLVSVKLSLDKRGHRVGGLTAESMTKLFNT
STDLTRAFEYLLATGNLQSKTGLGMLQDTGLCVVADKLNFIRYLSHFRCVHRGAAFAKMR
TTSVRKLLPESWGFLCPVHTPDGEPCGLMNHLTAHCEIVAPMHPTTTLPALLCSLGVTAA
DGSPGQPYSDCYPVILDGAMIGWVEKEVAPSVIESLRRFKVLGERKIAPWTEIVLVPQTG
KASLYPGLYLFTTPCRMVRPVRNLGLGKQELIGTFEQVYLNVGIFEEELEQGVTTHQELF
PHSMLSVVAEFIPFSDHNQSPRNMYQCQMSKQTMGFPLHSYQERSDNKLYRLQTPQSPLV
RPAMYDHYDIDNYPIGTNAIVAVISYTGYDMEDAMIVNKSSWERGFAHGSVYKTELIDLS
EKVKGDDSIVFGVKPGDPKVMDRLDADGLPFIGSTLNYGDPYYSYINLNTGQSYVTFYKY
QESCVVDNIKVCSNDTGTGRFKRICITARIPRNPTIGDKFASRHGQKGILSRLWPAEDMP
FTESGMCPDILFNPHGFPSRMTIGMLIESMAGKSAALHGLCHDATPFKFSEESSALEHFG
EMLKAAGYNYYGTERLYSGISGLELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKVTN
QPLGGRNVQGGIRFGEMERDALLAHGTSFLLHDRLFNCSDRSVAQVCMDCGSLLSPLLEK
PPPYWSNTRHRKTICLLCNKSDSIETVSVPYVFRYFVAELAAMNIKIKLDVK
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggatctaaacaagtggtgcaatctaaagtccgaaccgagtttaaaacatttgacagag
gcagggttcggtgtcccgaaagaaaagcagcgcgtgcccgtgcaggagctggtgaaggcg
cacattgagtcatttgatcaggcagttactgatggattatgtcgggttgtggaggccatt
cctcctatggagttcatgtacaagggagacaggatcggtctgtcgtttgtggaggccatc
attcacacgccagcggttggtaaaggaggaatcagcagagacctgcgggtcttccctgct
gaatgcagaggcaggcgctgcacttacagaggaaagctagtggcagatgtgagttggtct
gttaatggcgttcccaaaggaatcatcaaacagtcaatgggtaatgtgccgatcatggtt
aaatcaaaactctgcaacctttatggtctctcacccaaagaactcatcgagcatcacgaa
gaagctgaggaaatgggtggctatttcatcgttaacggcatagagaaggtgatccgtctt
ctgatcatgccacggaggaactatcccatcgcagtgtcaagaccaaagtttaagagcaga
ggacagggctacactcagtacgctatttcaatgcgctgtgtaagagacgaacacacagcc
attaatatgaatcttcactacctggacaatggaacggtgatggtgaatttcatttaccga
aaggagctgttctttcttcccttgggctttgcactgaaggctttagtggacttctcagat
taccagatctaccaggaactgattaaaggtcgagaggagaactctttctacaaaagctgt
gtctcagaaatgctgcgtatggtcatggaccagggctgcatgactaaagccaaggtgctt
aattacctgggcgagcgtttccgggtcaaactcctcctcccagactggttcactcacgag
cagtgcgctcacttcttgttagatgaatgtctgtgtattcacctgaagtcagatgtggag
aagttctacatgttgtgtctgatgacgcgaaagctcttcagctttgctaagcaggagtgt
atggaggaaaaccctgacagtctgatgttccaagaggttctcacaccaggccagctctac
ctcatgttcctaaaagagaaaatggccggctggttggtatcggtaaaactgtccttggac
aagagaggtcaccgagtgggaggactgactgcagagagtatgaccaaactcttcaacacg
agcacagatctcaccagagcctttgagtatcttttagccacaggaaacctccagtccaag
acgggtctgggcatgctgcaggacaccggactgtgtgttgtggcagataagctgaacttc
atccgttacctgtctcatttccgctgcgtgcacagaggagctgccttcgctaagatgagg
accacatctgtgaggaagctgctgccggagtcctggggtttcctgtgccccgttcacact
cctgacggagaaccatgcgggcttatgaaccacctgacggcccactgcgagattgtggcc
ccaatgcatcccacaacaaccctgcctgccctgctctgctctctaggtgtaactgcagca
gacgggagccccggtcagccgtattcggactgttatcctgtcatactggacggggccatg
attggctgggtggaaaaagaagtggcaccgtcagtcatcgaatctcttcgcagatttaag
gtgctgggagagagaaaaattgcaccctggactgagatcgtcctggttcctcagacgggt
aaagccagcttgtacccaggcctctatctgttcaccacaccctgtcgcatggtgcggccc
gtccggaaccttggcctgggcaaacaggagcttattggcacctttgaacaggtgtatctg
aacgtgggcatcttcgaggaagagctggagcagggagtgaccacgcaccaagagctgttt
cctcacagcatgttgagtgtggtggcagaattcatcccgttctctgatcacaatcagagc
cccagaaacatgtaccagtgtcagatgagtaaacagacaatgggcttcccactgcattca
taccaggaacgatcagacaataaactgtaccgtctgcagacccctcagagtcctctggtc
agacccgcaatgtacgatcactacgacattgataattaccctattggcaccaacgcgata
gtggctgtcatttcatacactggctatgatatggaagacgctatgatcgtcaataagtct
tcatgggagcgtggctttgctcatggttcggtttataagactgagctcatagacctgtct
gagaaggtcaaaggtgatgacagcattgtgtttggggtgaagccaggtgaccccaaagta
atggacaggctggacgcagacggattgccgtttatcggctccacgctgaactatggagac
ccttactacagctacatcaatcttaataccggccagagttatgtgaccttctacaagtat
caggagagctgtgtggtggacaacatcaaggtgtgcagcaatgacaccggcactggccgc
ttcaagcgcatttgcatcacagcccgcattcccagaaaccccaccatcggagacaagttc
gccagcagacacggtcagaagggaatcctgagccgcctgtggcccgcggaggacatgccc
ttcactgagagtggcatgtgcccggacatcctgttcaacccgcacggcttcccctccaga
atgaccatcgggatgctcatcgagagcatggctggaaaatccgcagccctccacggcctg
tgtcatgacgccacaccgttcaagttctctgaggagagctctgcgcttgagcatttcggt
gaaatgctgaaagctgcaggatacaactactacggcacggagcgcctctactctggcata
agcggcttggagctcgaggcagacatcttcatcggcgtggtttactaccagcgcttgcgt
cacatggtctccgataagttccaggtcagaactacaggagcgagagataaagtgaccaat
cagccgctgggaggaaggaacgttcagggaggaatccgcttcggagagatggagcgggat
gctctgctggctcacgggacgtcgttcctgctccacgaccggctgtttaattgctcagac
cgttctgtggcgcaggtttgcatggactgcggtagcctgctgtcgccacttctggaaaag
ccgcctccttattggtcaaatacacgccatcggaaaaccatctgcttgctgtgcaacaag
agcgactctatcgagactgtgtccgttccttatgtgtttagatacttcgtagcagagctt
gcggcaatgaacattaaaatcaaattagatgtcaagtaa
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