Onychostoma macrolepis: 131553734
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Entry
131553734 CDS
T09350
Symbol
polr1a
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
omc
Onychostoma macrolepis
Pathway
omc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
131553734 (polr1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omc03021
]
131553734 (polr1a)
Enzymes [BR:
omc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
131553734 (polr1a)
Transcription machinery [BR:
omc03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
131553734 (polr1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
zf_topless
BUD22
Nop14
Motif
Other DBs
NCBI-GeneID:
131553734
NCBI-ProteinID:
XP_058654570
LinkDB
All DBs
Position
14:28524703..28548121
Genome browser
AA seq
1700 aa
AA seq
DB search
MLFSKETPWRRLEGMSFGLFSTDEIRKLSVKNITNSQLLDNVGNAAANGLYDLALGPADN
KEICSTCMQDFSSCPGHFGHIDLPLPVYNPVFFDKLYLLIRGSCLSCHMLKCPRTAVHLL
LGQLKLLHVGAMKEVYELENVLNQLMEVNAQPSGIEIQEALEAFITPILKANEAEQHPAP
VKHICEKKSSLINTFWRVYMGPRKCPNCRASRVIVRREHNSKLIITQGSSTASKEKDDDS
LITKRGFLTPSLAREHVIKLWEKEGFFLKHLFSGFDMNNSEKGFSPEVFFMELLVVPPCR
FRPINRLGDQMFTNGQTVNLQAVLKDNFMIQKLLALIAAEKTNTIEDTQTEMEQSSESTE
ISQIDQTFLMGIQGLTLTDKLYNMWIRLQSHVNIVFDSDMDKLMTEKFPGVRQLLEKKEG
LFRKHMMGKRVDYAARSVICPDMYIGTNEIGIPMVFATKLTYPQPVTPWNVKELRQAVLN
GPSVHPGASMVINEDGSRTILSSSNLTQREAVAKQLLTPSTGQHKIPMKIVNRHIKNGDV
LLLNRQPTLHRPSIQAHCARILPGEKVLRLHYANCKAYNADFDGDEMNAHFPQSELGRAE
AYTLVSTDQQYLVPKDGKPLAGLIQDHMVSGTSMTIRGCFFTRDQYTALVYRGLTDKIGR
VKLLPPVLFKPVPLWTGKQVVSTLLLNVIPENSIPLNLMGKAKIPSKAWVKEPPRAVPGY
RPETMCESQVVIRQGELLLGVLDKAHYGSSAYGLVHCCYELYGGETSGKLLSCLARLFTA
YLQLYRGFTLGVEDILVKDGANKQRRKIIQKSVTCGSKALQAAFNLPAAAEDTEARERWQ
DAHLNTDQRDFNMVDLKFKEEVNQVNNNINKVCMPLGLHRSFPENNLQLMVQSGAKGSTV
NTMQISCLLGQIELEGRRPPLMPSGKSLPCFQPYEPQPRSGGFVTGRFLTGIKPPEFFFH
CMAGREGLVDTAVKTSRSGYLQRCVIKHLEGLVVQYDLTVRDSDGSVVQFLYGEDGLDIP
KTQFLQPQQFPFIKDNYEVIRKSKCLDEVLAKMEAGAAFSHFKAIKKWKAKHERVSPRDG
AFLLYSQKKLSKLKSQVENQTLANGRESATLQLLENWRALDESGHMKYLKKTSHCPDPCL
ALYRPDICFGSVSETFDSIVESYLDQFNVKQEFQTSSEITDTERLRRLLQLKWQHSLCDP
GEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILLVASSNIKTPMMSIP
VLMSKKALKRVKTLRKKITRVCLSEVLHKVDVIETFRLVEKRSQKSRVFKLTFHFLPPER
YQQDKLLTPNEILHFMEQKFFRMLLEAVKKLSAKLAAVNVVDARKATASDNDRDAGGVAD
KEDDGNEDAENNRIVDDEANEGDADATDSRRKEKQEEEVDYESEEGEEAIDEELEDVAED
RQEEANTQENSEEGSGESQPADQTQSLNRSAELEGDSQDSMRINAVLQLSSAIEDYKYDT
KNGLWCELTLVLPLTKVHFDLTSVVVKQAQNAVIMETKGITRCLLNEVTTKEGKKEMVLN
TEGINMHEMFKHADILDLNRLYSNQVHAMANTYGIEVALRVIEKEIKDVFAVYGIEVDPR
HLSLVADYMCFEGVYKPLNRFGIQSNSSPLQQMTFETSYKFLKQATMLGSYDNLSSPSAC
LVVGKVVKGGTGLFDLKQPL
NT seq
5103 nt
NT seq
+upstream
nt +downstream
nt
atgctgttttcaaaagaaacgccatggaggcgattagagggcatgtcgtttggcttgttt
tccaccgatgaaataaggaaactgagtgtgaaaaatatcactaattcccagctgttggat
aatgtgggcaatgccgctgcaaacgggctgtatgacctggcgctgggtccagctgataac
aaggagatctgctccacctgcatgcaagacttcagcagctgtcctggccactttggtcac
atagatctgccccttcccgtctacaaccctgtgttttttgataaattatatttgctcatc
cggggttcatgcctgtcatgccatatgttgaagtgtccgagaacggctgttcatttactg
ttgggccagctgaagctcctgcacgtgggtgcgatgaaggaggtgtatgagcttgagaac
gttctcaatcagttgatggaggtcaatgctcagccgtctggaatagaaatccaagaagct
ttggaggcgtttattacacccatcctaaaagccaatgaagccgagcagcaccctgcccct
gtcaaacatatctgtgagaaaaagtccagtctcattaacactttctggagagtatacatg
ggcccaaggaaatgtccaaattgcagagccagtagagtgattgtgcgcagagaacacaac
agcaaactcatcatcacacagggatcatccacagcaagcaaagaaaaggacgatgattca
ctgattaccaaacgtggattcttgactccaagtttggcgcgagaacacgtcatcaaactc
tgggagaaagaaggtttcttcctgaagcatctgttctcagggtttgacatgaacaactcc
gagaaaggcttcagtcctgaagttttctttatggagttgcttgtggttcctccatgcagg
ttcaggcctattaaccgattgggagaccagatgttcaccaacggacagactgtgaacctg
caggccgtgttaaaggataatttcatgattcagaaactactcgcactgatcgctgctgag
aagaccaacactattgaagacacacagacagagatggagcagtccagtgaatccacagag
atcagtcagatagatcagacctttttaatgggcatccaaggactgactctcacagacaag
ctctataacatgtggatccgcctgcagagtcacgtcaacatcgtgtttgacagcgacatg
gacaaactgatgactgagaagttcccaggcgtccgtcagctcttggagaagaaagagggt
ttgttcaggaagcacatgatgggaaagcgtgtggattacgctgcacgctcggtcatttgt
cctgatatgtacatcggaaccaatgagattggaataccaatggtttttgctaccaagttg
acgtacccacagccagtgacaccctggaacgtgaaggaactcaggcaggcagtgctgaat
ggacccagcgtccaccctggagcctccatggtcattaatgaagatgggtcccgaaccatc
ctcagcagcagcaacctgacccagagagaagctgtggccaaacagctcctgacccccagc
accggccagcacaagatacccatgaagatcgtaaatcggcacatcaagaatggggatgtg
ctgctgttaaaccgtcagcccactctccacagaccgtcaattcaggcccactgtgcccgc
atcctgcccggagagaaagtgctcagattacattatgccaactgtaaggcctacaacgct
gactttgacggtgacgagatgaacgctcacttccctcagagtgagctgggcagagcggag
gcctacacgctagtgagcacagaccagcagtacttggtgcctaaagatgggaagccgttg
gccggcctgattcaggaccacatggtgtctggcaccagcatgaccatccgtggctgtttt
ttcacacgggatcagtacactgcgctagtctacagaggcctgacggacaagatcggcaga
gtgaagctcctgcctcctgtgctctttaaacccgtgcctctctggacaggaaagcaggtg
gtgtcgacccttttgctgaatgtcatcccagaaaacagcatccctttaaacttgatggga
aaagcaaagattcccagtaaagcctgggtgaaggaaccgcccagagctgttccaggatac
aggccggaaactatgtgtgaatcacaggtggtcattcgtcagggagagctcttgctggga
gttctggataaagctcactatggcagctcagcgtacggtttggtccactgctgctacgag
ctctacggaggagagaccagcggcaaactgctcagctgtctggcacgactcttcactgcc
tacctgcagctgtaccgcggtttcaccttgggtgtggaagacattctagtaaaagatgga
gccaacaaacagagaaggaaaattatccaaaagtcagtcacgtgtggctctaaggctctc
caggctgcatttaacctgcctgcagctgctgaagacactgaagccagagaacgctggcaa
gacgctcatctgaacacagaccagagagatttcaacatggtggacctgaagtttaaagag
gaggtcaatcaagtgaacaacaacatcaacaaggtgtgcatgccgctgggtctccaccgc
tccttcccagaaaacaacctacagctgatggtgcagtcaggagccaagggttcgactgtt
aatactatgcagatctcctgtttattgggtcagattgagctggagggccgccgaccgcca
ctgatgccttctgggaagtccctgccctgctttcagccctatgaacctcagccgcgatcc
ggaggattcgtaactggcagattcttgacaggaatcaaacctcctgagttctttttccat
tgtatggctggtcgtgaaggtcttgtggacactgctgtcaaaaccagtcgatctggttat
ttgcagaggtgtgtgatcaagcatctagaaggtctggtggtccagtacgatctgactgtg
cgagacagtgatggaagtgtggtccagtttctttatggagaggacgggctggacatcccc
aagacccagttcctacagccgcagcagttccctttcatcaaagacaactacgaggtcatc
agaaagtcaaagtgtttggatgaagttctggctaaaatggaagcaggggcagcatttagt
cactttaaggccatcaagaaatggaaagccaaacatgagcgtgtttcacccagagacggt
gccttcctgctctactcgcagaagaaacttagcaagttgaagtctcaagtagaaaaccag
acactggccaatgggagagagtcagccactctacagctcttggagaattggagagctctg
gacgagtctggccatatgaagtatttaaagaagacgtctcattgtccagacccgtgtctg
gctctttaccggccggacatctgctttggttcagtgtctgagacgtttgactccattgtt
gagtcctacctggatcagttcaatgtcaagcaggaatttcagacctcctctgaaatcact
gacacagagagattgaggcgtctcctgcagctgaagtggcagcactctctgtgtgacccc
ggagaggccgtgggtctgctggcagctcagagcattggtgaaccgtccacacaaatgacc
ctcaacaccttccactttgccggcagaggagagatgaatgtcaccctgggtataccaaga
ttaagagaaatactcctggttgcgagctctaacatcaaaacccctatgatgagcattcct
gttctgatgagcaagaaagccttgaaacgtgttaagacgctgcggaagaagataacgcgt
gtgtgtttgtcagaggtgcttcacaaagtggatgtgatagaaactttccgcttggtagag
aaacggagccagaagtcacgagttttcaaactcacattccacttcctgcccccagagcga
taccagcaagacaagctactcacgcctaatgagattcttcatttcatggagcagaaattc
tttcgcatgctgctggaggccgttaagaagctgagtgctaaactggcggctgtcaatgtg
gtggatgcacgcaaagccacggcaagtgacaatgatcgagatgccggtggcgtcgcggac
aaagaggatgatggcaatgaggatgcagaaaacaacaggattgtggatgatgaggcgaat
gaaggtgatgctgatgccacagattccaggagaaaagaaaaacaagaagaggaggtagac
tatgagagtgaggagggagaggaggccattgatgaggagctggaggatgtggctgaggac
agacaggaagaggcaaacactcaggagaactctgaggaagggtctggtgaaagccaacca
gcagaccagacccagagtcttaacagatctgcagagctggagggagattcacaggactcc
atgaggatcaacgctgtgcttcagttgagctctgccattgaggactacaaatatgacacc
aaaaatgggctatggtgtgagctaaccctggtcctacccctcactaaagtgcactttgac
ctcacgtcagtggtggtgaagcaggctcagaacgctgtcatcatggagaccaagggtatc
acacgctgcttattaaatgaagtcaccacaaaggagggcaagaaagagatggtgctcaac
acagagggcatcaacatgcatgagatgttcaaacatgctgatatcctggacttgaaccgg
ttatactccaaccaagttcatgctatggccaacacgtacggtattgaggtggccctcaga
gtcattgagaaggagattaaagatgtgtttgctgtctatggtattgaggtggacccacgc
catctctctctagtggctgactacatgtgttttgagggggtgtacaagcctctcaacaga
tttggcattcaatccaacagttccccgctgcaacagatgacctttgagaccagttacaag
tttttaaagcaagcaacgatgctgggttcttatgacaacctcagttcgccctcagcttgc
ttggttgtaggaaaagttgtgaaaggaggaaccggcctcttcgatctgaaacagccgtta
tag
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integrated database retrieval system
