Oryzias melastigma (Indian medaka): 112147959
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Entry
112147959 CDS
T07439
Name
(RefSeq) neurogenic locus notch homolog protein 1
KO
K02599
Notch 1
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
112147959
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_CA
Ank_2
EGF_2
Ank
NOD
Notch
NODP
Ank_3
Ank_5
Ank_4
EGF_3
DL-JAG_EGF-like
Motif
Other DBs
NCBI-GeneID:
112147959
NCBI-ProteinID:
XP_024130454
Ensembl:
ENSOMEG00000009226
LinkDB
All DBs
Position
LG9:complement(4129818..4191166)
Genome browser
AA seq
2498 aa
AA seq
DB search
MHILSVKLTFLLSLLGLTRGLRCSMPTESCLNQGKCEATPDGNGECKCQHGFVGSRCQFH
DPCNNLPCANGGTCRAVSKGNTVDFNCTCKLGFTDRRCMTPINIACFSSPCRNEGTCEPE
GLQGYRCRCPPGFAGEDCSKADPCASNPCANGGRCSLFESFFICTCTPFFSGQTCKQDIN
ECDINPPLCKNGGLCINEVGGYRCQCPPEYIGKHCETRYLPCNPSPCLNGGTCIQKGETN
YECSCVPGFTGKNCNSNINDCPGHECQNGGTCVDGVNTYNCQCKPEFTGQLCMDDVDECQ
LMPNACQNGGTCHNTYGGYQCVCVNGWTGDDCSKNIDDCANAACYKGSTCHDRVASFYCE
CPPGRTGLLCQLDDACISNPCQKGSNCDTNPVTGNHFCTCPSGYFGPSCDKDVDECSLGP
NPCEHAGKCLNTKGSFQCKCQRGYVGPRCELDVNECISNPCKNEATCLDQIGDFQCICMP
GYEGEFCEINTDECANGPCFNSGKCIDKINGFHCECPTGFTGTLCQTDIDECASTPCKNG
AKCTDGPNKYTCECTEGYAGQHCETEINECSSDPCHYGTCKDGLASFSCDCAAGYTGRLC
ETNINECLSQPCRNGGTCQDRANAYICSCPKGTEGINCEINIDDCKNNLCKNGTCIDKIN
GYECACEPGFTGTMCNIDIDECAVNPCRNGGTCIDGINSFTCKCPDGYQDPTCFSQVNEC
LSNPCIHGHCEDKINGYECLCDSGWSGKNCDINNNECESNPCMNGGTCKDMTSGYVCTCR
MGFTGPNCQTNINECASNPCLNQGTCIDDVAGYKCNCVLPYTGEHCETLMAPCNSKPCKH
GGVCRESDDYLSFSCACPEGWQGQTCEVDIKECVKNPCLNGATCQNTLGSYQCSCKPGFT
GRNCEANIDDCKPNPCNNGGRCQDEVNNFLCTCLLGFRGTTCEEDINECESNPCKNGANC
TDCVNSYTCTCPAGFSGINCENNTPDCTESSCFNGGTCVDGINAFTCLCPPGFTGNYCQH
DINECDSKPCMNGGTCQDSYGTYKCSCPHGYTGLNCQNLVNWCDSSPCKNGGSCWQRVTA
YSCECETGWTGLYCDVPSVSCEVAAKQRGVDISQLCQNSGQCLDAGNVHYCHCQAGYTGS
YCEEQVDECTPNPCQNGATCTDFLGGYSCKCLPGFLGTNCSVEINECFSQPCQNGGTCID
LIDTYKCSCPRGTQGEHCEVNFDDCSPFTDPFTKEPKCFNQGKCVDRVGGYHCICPSGYV
GERCEGDVNECLSNPCDPRGTHSCIQLTNNYRCECRTGYTGQRCDKVFDGCKSRPCRNGG
TCAVASNTPHGFICKCPPGFTGSTCEYDSQTCGSLHCRNGGTCISGHKSPKCLCPPSFTG
PDCQHPTDSPCNSNPCYNGGTCQHTAEAPYFHCVCPSKFNGLLCHILDNGFQGGVGSSVP
TLPEVTVSCGIPQCEAYKHNKYCNTICNNHECGWDNGDCSLNFDDPWKNCSASLQCWRYF
NDGKCDSQCDNAGCLYDGFDCQNLEGQCNPLYDQYCRDHYADNHCDQGCNNAECEWDGLD
CAKNLPEKLAVGRLVLVVHISPDHLLNKSSTFLRELSRVLRTNVLFRKDSNGEIMVYPYY
GDEHELKKYNVKRSVDSWSEVPAKVLNVMKRSLYGAVGSSRRAKRELDHLQIKGSIVHLE
MDNRQCFQQSSECFQSTTDAAAFLGALESSGKLDVPFTIEAVYSNVEPKNAQGLYPIYLV
LGGVGILALLGVGMVAARKRRHEQGRLWLPEGFKTTESSKKKRREPVGEDSVGLKPLKNS
DISLMDDMPTEWGEDEPTDATRFKQFEEQAVLDTDDQTDHRQWTQQHLDAADLRIPSIAP
TPPQGEIENDCMDVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDASANVINDFIYQGAN
LHNQTDRTGETALHLAARYARSDAAKRLLEASADANIQDNMGRTPLHAAVAADAQGVFQI
LIRNRATDLDARMHDGTTPLILAARLAAEGMVEELINCHADVNAIDDFGKSALHWAAAVN
NVEAAIVLLKNGANKDMQNNKEETPLFLAAREGSYETAKVLLEHFANREITDHMDRLPRD
IAQDRMHHDIVRLMDEYNMVRSPPMHGGALSTTLSPPLCSPNGFLSSMKQPQPQSQKKAR
KPSAKAIGCKDGKDMKVKKKNSQDGKSVNLLDSSAVLSPVDSLESPHGYVSDVASPPMMT
SPFQQSPSVSLNHLQGMSDPHLAVGHMVMPNKQELARMQFDPLPPRLTHLPVPGSGGQGS
MNGQCDWLSRMHSGMSQTGQFNPMRGGHQGAQHGMMTTALHNGHPASSLTQMMTYQGIQG
TRLGPPVHMMQQQQIQQLQNLQQLQLQHQNSNTTNSQNFISGELSSPELQPGSGSSSIPI
HTILPQESQILPSSISQSMPSTQFLTPPSQHSYSGPMDNTPNHQVQVPDNPFLTPSPGSP
DQWSSSSPHSNMSDWSEGISSPATSMQSQMGHLPEQFK
NT seq
7497 nt
NT seq
+upstream
nt +downstream
nt
atgcatattttgtctgtgaaactaacttttttgctgtcgctgttgggcttaacacgaggt
ctaagatgctccatgcccactgagtcatgtttgaaccaggggaagtgtgaagcaactcca
gatggcaacggagagtgcaagtgccagcatggatttgttggaagcagatgtcagtttcat
gacccctgcaacaatctgccgtgtgcgaatggcggcacgtgtcgagccgtctccaaaggc
aacacggtggacttcaactgcacctgcaaacttggcttcactgaccgccgctgcatgacg
cccataaacatcgcctgcttcagctcaccgtgccgcaacgagggcacctgtgagcccgag
ggtctgcagggctacagatgccgctgcccacctggatttgcaggtgaagactgctccaaa
gccgacccgtgtgcctcaaacccatgtgcaaacggtggccgctgctccttgtttgagtcc
ttcttcatctgcacctgcacgcctttcttctctgggcagacctgcaaacaagacatcaac
gaatgcgacatcaacccaccgctctgcaaaaacggcggcttgtgcatcaacgaagtgggc
ggctacagatgccagtgcccccctgaatacatcgggaaacactgcgagacgcgctacctg
ccctgcaacccgtcgccctgccttaatggaggcacctgcattcaaaagggcgagaccaac
tatgagtgctcctgtgtgccaggttttacaggaaaaaactgcaacagcaacattaacgac
tgtccaggtcacgagtgtcagaatggaggcacatgcgtggatggagtcaacacttataac
tgccagtgtaaacccgagtttacaggtcagctctgcatggacgacgtcgatgagtgccag
ctgatgcccaacgcctgccaaaacggcggtacctgccacaacacgtacggcggctaccag
tgcgtgtgcgtgaacggctggaccggggacgactgcagcaagaacatcgacgactgtgcc
aatgccgcctgctacaaggggtccacctgtcacgaccgcgtggcgtccttctactgcgag
tgtcctcccgggcgcaccggcctgctctgccagctggacgacgcctgcatcagcaatccc
tgccagaaaggctcgaactgcgataccaaccctgtcactggaaaccacttttgtacctgc
ccctcggggtattttggaccctcctgtgacaaggatgtggatgagtgctccttgggtccc
aacccctgtgagcatgctgggaagtgcttaaacactaagggctcgttccagtgtaagtgc
cagcggggttatgtcgggccacgctgcgagttggacgtcaatgagtgcatctccaatccg
tgtaagaacgaggccacctgcttggaccagataggggacttccaatgcatctgcatgcca
ggttacgagggggaattctgtgagatcaatacggacgagtgtgccaacggcccctgcttc
aacagcggcaagtgtatcgacaagatcaacggcttccactgcgagtgccccacagggttc
accgggaccctctgccagacggacatcgacgagtgtgccagcacgccgtgtaaaaatggc
gccaaatgcacagacgggcccaacaagtacacctgcgagtgcactgaaggttacgctgga
cagcactgtgagacagaaatcaacgagtgctcctctgacccctgtcactacggcacctgc
aaggacggcctggcctccttcagctgcgactgcgcagccggatacaccggtcgtctgtgc
gagaccaacatcaacgagtgtctgagccagccctgcaggaacggaggcacatgccaggac
cgcgcaaacgcctacatctgcagctgtcctaaaggcacagagggaatcaactgtgaaatc
aatattgacgattgcaagaataatctttgcaaaaatgggacctgtatcgacaagatcaat
ggctacgaatgcgcctgtgaacctggatttacagggaccatgtgcaacattgatatcgat
gagtgtgctgtaaacccctgccggaacggcggcacctgtatcgacggcatcaactctttc
acctgcaagtgtccggacggctaccaggatcccacctgcttctcccaggtcaacgagtgt
ctcagcaacccctgcatccacggtcactgcgaggacaagatcaacggctatgaatgtttg
tgcgactctggctggagcggtaagaactgtgacatcaacaacaacgagtgtgaatccaac
ccatgtatgaacggaggtacctgcaaggacatgaccagcggctacgtctgcacctgtcgc
atgggcttcaccggaccaaactgtcagacaaacatcaacgaatgcgcctccaacccctgc
ctcaaccagggaacgtgcatcgatgatgttgcagggtacaagtgtaactgtgtcctgcct
tacacgggagaacactgtgaaacactgatggcgccctgtaactccaaaccctgtaaacat
ggaggagtgtgtcgtgagtcggacgactacctgagcttctcctgtgcctgtcctgaaggg
tggcaaggccaaacatgtgaggtggacatcaaagagtgcgtgaagaacccgtgtctgaat
ggagccacctgccagaacactctgggcagctaccagtgcagctgcaaacccggtttcact
ggacgcaactgtgaggccaacattgatgactgcaagcccaacccctgcaacaacggaggc
cgctgtcaggacgaggtgaacaacttcctgtgcacctgcttgctcgggtttcggggcaca
acgtgcgaggaggacattaacgagtgtgaaagcaacccgtgcaaaaatggagctaattgc
acagattgcgtcaacagctacacctgcacctgcccggccggctttagtgggatcaactgt
gaaaataacacccctgactgcacagagagctcgtgctttaacggcggcacctgtgtggac
ggcatcaacgccttcacctgcctgtgcccgccgggcttcaccgggaactactgccagcac
gacatcaacgagtgcgactccaaaccctgcatgaacggcggcacctgccaggacagctac
ggcacctacaaatgcagctgtccgcatggctacacggggctcaactgtcagaacttggtg
aactggtgcgactcctcgccctgtaaaaatggaggctcctgctggcagagagtcaccgcc
tacagctgcgagtgtgaaactggctggacgggcctttattgtgacgtgccaagtgtttcc
tgtgaagtggcggccaaacaaagaggagttgacatttcccagctgtgtcagaactccggc
cagtgtctggacgccggaaacgttcactactgtcactgccaggctggatacacgggcagc
tactgtgaggagcaggtggatgaatgtacgcccaacccctgccagaacggcgccacctgc
acagactttctgggtggatacagctgcaagtgcctgcctggcttcttggggaccaactgc
tcggtggagatcaatgaatgtttctctcagccgtgccagaacgggggcacctgcattgac
ctgatcgatacttacaaatgctcctgtcccagaggaacccaaggtgagcactgcgaggtc
aactttgacgactgcagcccgttcaccgaccccttcaccaaggagcccaagtgcttcaac
cagggcaagtgtgtggacagagtgggggggtaccactgcatctgtccctcggggtatgtg
ggggagcgctgtgagggagacgtcaacgaatgtctgtctaacccctgcgacccccgcggc
acgcacagctgcatccagctcaccaacaactaccgctgcgagtgtcgcaccggatacaca
ggtcagcggtgcgacaaggtgtttgatggctgtaagagtcgaccctgtcgtaacggaggg
acgtgtgcggtggccagcaacacgccacacggcttcatctgcaaatgtcctcctggcttc
accggctccacctgtgagtacgactcccagacctgcggtagcctccactgccgcaacgga
gggacctgcatttctggacacaagagtcccaagtgtctgtgcccgccgtccttcaccgga
ccggactgccagcaccccaccgacagcccctgcaactccaacccgtgctacaacggcggc
acgtgccaacacacggccgaggcgccatacttccactgcgtctgtccgtccaagttcaac
ggccttctctgccacatcctggacaacggcttccaggggggggtcggcagcagcgtgccc
acgctgcccgaggtgacggtttcctgcggcatcccgcagtgcgaggcgtacaagcacaac
aagtactgcaacaccatctgcaacaaccacgagtgcggctgggacaacggcgactgctcg
ctcaactttgacgacccctggaagaactgctccgcctcgctgcagtgctggcgctacttc
aacgacgggaaatgtgattcgcagtgcgacaacgccggctgcctctacgacggcttcgac
tgccagaacctggaagggcagtgcaaccctctgtacgaccagtactgcagggaccactac
gccgacaaccactgcgaccagggctgcaacaacgccgagtgtgagtgggacggcctggac
tgtgccaagaacctccccgagaagctggccgtcggccgcctggtcctggtggtccacatc
agtccggatcacctcctgaacaaatcctccaccttcctgcgggagctgagccgtgtcctc
cgcaccaacgtgctgttccggaaggattccaacggcgaaatcatggtctatccgtactac
ggcgacgagcacgagctgaagaagtacaacgtcaagcgctcggtggactcctggtcggag
gttcctgccaaggtgctgaacgtgatgaagaggagtctgtatggagctgtggggagcagc
aggagagccaagagggagctggaccatctccagatcaaaggctccatcgttcatctggag
atggacaaccggcagtgcttccagcagtccagcgaatgcttccagagcaccacggatgcc
gccgcctttctcggcgctttggagtccagcggcaaattagacgttcctttcaccatcgaa
gccgtctacagcaacgtggaacccaagaacgctcagggactataccccatctacctagtc
ctcggcggcgtggggattctggccttactgggggtggggatggtggccgcccggaagcgg
cgccacgagcaagggcgcctctggcttcctgagggcttcaagaccacggagagcagcaag
aagaagaggcgggagccggtcggagaggattcggtggggttgaagccgctgaagaactcc
gacatctcgctgatggacgacatgcccaccgagtggggggaggacgaacccaccgacgca
acacgcttcaagcagtttgaggagcaggcggtcctggacacggacgatcagacggaccac
cgtcagtggacacagcagcacctggacgccgccgacctgcgcatcccctccatcgccccc
actccccctcagggcgagatcgagaacgactgcatggacgtgaacgtgaggggaccagat
ggattcaccccgctgatgatcgcatcctgcagtggcggcgggctggagacgggcaacagc
gaggaggaggaagacgcctcggcgaacgtcataaacgacttcatctaccagggcgccaac
cttcacaaccagaccgaccgcactggcgagacggctctgcacttggctgcgcgctacgcc
cgctcggatgcggccaagcgcctgctggaggccagcgccgacgccaacatccaggacaac
atgggacggacgccgctgcacgccgcggtggccgcagacgcacagggagtgttccagatt
ctaatacggaaccgcgccaccgatctggacgctcgcatgcatgacggcaccacgccgctc
atcttggcggccaggctggcggcggaggggatggtggaggagctcatcaactgtcacgct
gatgtcaacgccatcgatgactttggtaaatccgctcttcactgggccgccgcggtaaac
aacgtggaggcagccatcgtcctgctgaagaacggcgccaacaaagacatgcagaacaac
aaggaggaaactcctctgtttctggcggcccgggaggggagctacgagacggcgaaggtc
ctgctggagcactttgccaacagagaaataaccgaccacatggaccggctgcccagagac
atcgcacaggacagaatgcatcacgacatcgtgcggctgatggacgagtacaacatggta
cgcagtcctcccatgcacggaggcgccctgagcaccacgctgtcccctcctctctgctcc
cccaacggcttcctgagcagcatgaagcagcctcagccgcaaagccagaaaaaggcccgc
aaacccagcgccaaggccatcggctgcaaggacggcaaagacatgaaggtgaagaagaag
aactcacaggacgggaagtccgtcaacctgctggacagctcggctgtcctgtccccggtg
gactcgctggagtctcctcacggctacgtctccgacgtggcgtctcctcccatgatgacg
tctcctttccagcagtcgccgtccgtgtccctgaaccacctgcagggcatgtcggacccc
cacctggccgtcggccacatggtgatgccaaacaagcaggagctggcccggatgcagttc
gacccgctgcccccccgcctgacccacctcccggtccccggctctggaggtcaggggtca
atgaacggccagtgtgactggctctccaggatgcacagcggcatgagccaaacgggccag
ttcaaccccatgagaggcggccaccagggggcgcagcacggcatgatgaccaccgcgctc
cacaacggacaccccgcctccagcctgacccagatgatgacctaccaggggatccagggc
accaggctgggccctccggtccacatgatgcagcagcagcagatccagcagctgcagaac
ctccagcagctgcagctgcagcaccagaactcaaacaccaccaacagccagaacttcatc
agcggcgagctgagttctccagagctccagccgggatccggcagctccagcattcccatc
cacaccatcctcccccaggagagccagatcctgccctcctccatcagccagtccatgccc
agcacccagttcctgaccccaccctcccagcacagctactcgggccccatggacaacact
cccaaccatcaggtgcaggttcccgacaaccccttcctgaccccatcccccggctccccg
gaccagtggtccagctcgtctcctcattccaacatgtccgactggtccgagggcatttcc
agtccggccaccagcatgcagtctcagatgggacaccttccggagcagttcaaataa
DBGET
integrated database retrieval system
