Oryzias melastigma (Indian medaka): 112148641
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Entry
112148641 CDS
T07439
Symbol
gldc
Name
(RefSeq) glycine dehydrogenase (decarboxylating), mitochondrial
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml00260
Glycine, serine and threonine metabolism
oml00630
Glyoxylate and dicarboxylate metabolism
oml00785
Lipoic acid metabolism
oml01100
Metabolic pathways
oml01200
Carbon metabolism
Module
oml_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
112148641 (gldc)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
112148641 (gldc)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
112148641 (gldc)
Enzymes [BR:
oml01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
112148641 (gldc)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-GeneID:
112148641
NCBI-ProteinID:
XP_024131650
Ensembl:
ENSOMEG00000013523
LinkDB
All DBs
Position
LG9:complement(5631708..5650962)
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AA seq
1032 aa
AA seq
DB search
MQKCAKSWGVFFLAKSVNPGAPRGHLRHKSGVLWKLPSGSRGGSASLTTAARGLRTTAAA
ASSRRIERILPRHDDFAERHIGPGEREKRDMLDVLGLESIDQLIENTVPASIRLQRSLKM
DDPICENEVLEALQKIASENKVWRSYIGMGYYNCSVPPPIQRNLLENAGWVTQYTPYQPE
VSQGRLESLLNYQTMICDITGMPVANASLLDEGTAAAEAMQLCHRQNKRRTFYIDPRCHP
QTIAVVQTRANYIGVKTELKLPHEMDFSGKDVSGVLFQYPDTDGRVEDFTALVDRAHKGG
ALACCASDLLALCVMRPPGEFGVDIALGSSQRFGVPLCYGGPHAAFFAVKENLVRMMPGR
MVGVTRDAAGKEVYRLALQTREQHIRRDKATSNICTAQALLANMAAMYALYHGPQGLKHI
AERTHNAALILAEGLKRAGHRLHSDIFFDTLRINCSVAAKDILERATQRQINLRVYQEGV
LGVSLDETVTERDLDDLLWVFGCESSAELIAEKMGERVKGIMGSPFKRTSKFLTHQVFNS
YHSETNIVRYMKRLENKDISLVHSMIPLGSCTMKLNSSSELMPITWREFGNIHPFVPLDQ
AEGYQKLFRQLEKDLCEVTGYDKISFQPNSGAQGEYAGLAAIKAYLNSRGESSRSVCLIP
KSAHGTNPASAQMAGMKVQVVEVDKDGNIDLVHLKALVDKHKASLAAMMITYPSTFGVFE
ENIRDVCELIHQNGGQVYLDGANMNAQVGLCRPGDYGSDVSHLNLHKTFCIPHGGGGPGM
GPIGVKAHLAPFLPSHPVVPMQSVNSSSSLGTISAAPWGSSAILPISWTYIKMMGSRGLT
HATEVAILNANYMAKRLEGHYKVLFRGRKGFVAHEFILDVRPFKKSANIEAVDVAKRLQD
YGFHAPTMSWPVAGTLMIEPTESEDKAEMDRFCDALLGIRQEIAEIEEGRMDSRINPLKM
APHSLACISSSNWDRPYSREYAAFPLPFIRPETKFWPSISRIDDIYGDQHLVCTCPPMEV
YESPYEEKIASS
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagtgcgccaagtcgtggggggtcttcttcttggcaaagtctgtgaatcccggc
gctccgcgcgggcatctcagacacaaaagcggcgtgctttggaaacttccgagcgggagc
cgcggcgggtcggcgtccctgacaaccgccgcccgggggctgaggaccaccgcggccgcc
gcctcctccaggcgcatcgagaggatcctgcccagacacgatgacttcgcggagcgccac
atcggtccaggtgagcgcgagaagagggacatgctggacgtcctgggactcgagtcaatc
gatcagctgatcgaaaacacagttccagcctccatccgccttcagaggagtttgaagatg
gatgatccgatctgtgaaaatgaggtcctggaagccctgcagaagattgcctcagagaac
aaagtttggaggtcttacatcgggatgggttactacaactgctctgtgccgccgccgatc
cagaggaatctgctggagaatgctggctgggtgacgcagtacacgccgtaccagcccgag
gtctctcagggccgcttggagtctctcctgaactatcagacgatgatctgtgacatcaca
gggatgccggtggccaacgcctccctgctggacgagggaacggctgctgccgaggccatg
cagctctgccacaggcagaacaaaaggcgaactttctatattgatccacgctgtcatccc
caaacaatcgccgtggtgcagaccagagccaactacattggagtcaagacggagctaaag
ctgcctcacgagatggacttcagcgggaaggacgtgagcggcgtgctctttcagtatcca
gacactgacggcagagtggaggacttcaccgctctcgtggaccgagcacacaagggcggg
gccctggcctgctgcgcctctgacctgctggccctctgtgtgatgcgcccccctggagag
ttcggtgttgacatcgccttggggagctcccagaggtttggggttcctctctgctacggc
ggtccacacgccgcctttttcgccgtcaaagaaaacctggtccgtatgatgcccggcaga
atggtcggagtcaccagggacgcggctgggaaggaggtgtaccgccttgccctgcagacc
agagagcagcacatccgcagagacaaggctaccagcaacatctgcactgcacaggctctt
ctggcgaacatggctgccatgtatgcactgtaccacggtccacagggactcaaacacatc
gctgagaggacacacaatgctgctctcattctagctgaaggtctgaagagagcgggccac
cggctgcacagcgacattttctttgacacgctaaggatcaactgtagtgttgctgccaaa
gacattttggagcgagccacacagcggcaaataaacctgcgggtctaccaagagggagtg
ctgggcgtttctctggatgagacggtgaccgagagagacttggatgacctcctttgggtt
tttggctgtgaatcttcagctgaactcattgcggaaaagatgggggagcgagtgaaaggg
attatgggaagtcctttcaagaggacaagcaagttcctcacacaccaggtcttcaacagt
taccactctgagaccaacattgtgcgctacatgaagcgtctggagaacaaggacatctca
ctggtgcacagcatgatcccactgggctcctgcaccatgaagctcaacagttcatcagaa
ctcatgcccatcacctggagggagtttgggaacatccaccccttcgtgcctctggatcag
gcggagggataccagaagctcttccggcagctggaaaaggacctgtgtgaggtgacgggc
tacgacaagatctccttccagccaaacagtggcgctcagggagaatatgctggcctggct
gctataaaggcttaccttaactcaaggggggaaagctccagaagtgtctgcctgattccc
aagtctgcccacggcaccaacccagcaagcgctcagatggccggcatgaaggtccaggtg
gtggaggtggacaaagacggcaacatcgatctggtgcatctgaaggctctggtggacaag
cacaaagcgagtcttgcggccatgatgatcacgtacccctccacttttggcgtcttcgag
gagaacatcagagacgtctgtgaactcattcatcaaaacggcggccaggtgtatctggat
ggtgccaacatgaacgcccaggtgggtttgtgtcgtcctggagactacggctcggatgtg
tctcacctgaacctgcacaagaccttctgcatccctcacgggggaggaggacctggcatg
ggccccattggggtgaaggctcacctcgcgcccttcctgcccagtcaccccgtcgttccc
atgcagtccgtcaacagcagcagctcgctgggaaccatcagcgccgcgccctggggctcc
agcgccattctgcccatctcgtggacgtacatcaagatgatgggatccagaggactgact
catgcgactgaagtggccatcctcaacgccaactacatggccaagaggctggaaggccat
tataaagtcctcttcagaggcaggaaaggttttgttgctcatgaattcattctggacgtg
aggccgttcaagaagtcggccaacatagaggctgttgatgtggccaagaggctgcaggat
tatggtttccacgcccccaccatgtcgtggccggtggccggcacactcatgatcgagccc
acggagtcggaggacaaggccgagatggaccgattctgcgacgccctcctcgggatccgg
caggaaatcgcagagatcgaggaggggaggatggactctcgcatcaacccgctgaagatg
gctcctcactctctagcatgcatctcctcctcgaactgggacagaccctactcccgggag
tacgctgccttcccattgccctttatcagacctgaaaccaagttctggccgagcatctca
agaatcgacgacatctacggcgaccagcacctggtgtgcacctgcccgcccatggaggtc
tacgagtctccgtacgaggagaagatcgcctcctcgtaa
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