Oryzias melastigma (Indian medaka): 112148930
Help
Entry
112148930 CDS
T07439
Symbol
grin1b
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1b isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04020
Calcium signaling pathway
oml04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
112148930 (grin1b)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112148930 (grin1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oml04040
]
112148930 (grin1b)
Ion channels [BR:
oml04040
]
Ligand-gated channels
Glutamate (ionotropic)
112148930 (grin1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
DUF6724
SIP
Cas_APE2256
Motif
Other DBs
NCBI-GeneID:
112148930
NCBI-ProteinID:
XP_024132123
Ensembl:
ENSOMEG00000004485
LinkDB
All DBs
Position
LG9:complement(33528281..33622179)
Genome browser
AA seq
939 aa
AA seq
DB search
MEVRSVLLLAVLQCCSVALCGCEPRLVNVGAVLSQKRYEQVFKEAVSQANALYGKDKFKM
NAISVTHKPNAIQMALSVCEDLISNQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVVG
LTTRMSIYSDKSIHLSFLRTVPPYSHQAQVWFDLMREFRWNHIILIVSDDHEGRAAQKKL
ETLLEERETKTKNRNYENLDQQNFDFRRTPKAEKVLLFNQDTNLTALLLEARDLEARVII
LSASEDEAAAVYKAARQLNMTGSGYVWLVGEREMNGKALNEAPDGLLGLQLINGKNESAH
IADAVAVVAQSLQELFEKENITEPPRGCVGNTNIWRTGPLFKRVLMSSKYPDGLTGRIEF
NDDGDRRFATYSILNYQQKPGRVVQVGIFNGTQVVMNPQRKIIWPGGETEKPVGYQMSTK
LKIVTIHQEPFVYVKPTKSDGTCKEEYTVNGVLIKKVICTGPNGTIPGQPIVPQCCYGFC
IDLLIKLAMSMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTI
NNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYL
LDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGF
AMIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVEL
STMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFG
IGMRKDSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFML
VAGGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDRKSGRAEPEPKTSFR
SITSTSDLKRRMAPGDATPYPTDITGQLNLSDPSVSTVV
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgcgcagcgtgctcctgctggcggtgctgcagtgctgctccgtggcgctgtgt
ggctgcgagccccgcctggtcaacgtcggcgccgtcctgagtcagaagcgctacgagcag
gtgttcaaggaggcggtgagtcaggccaacgctctctacggcaaggacaagttcaagatg
aacgccatctccgtcacacacaaacccaacgccattcagatggcgctgtccgtctgcgag
gacctgatctccaaccaggtgtacgcaatcctggttagtcatcctcctcagtccaacgac
catctgactccaacgcctgtctcttatacggccggcttctaccgcattcctgtcgttggc
ctaacaactcgcatgtccatctactcggataagagcatccacttgtcattcctgaggacg
gtgcccccgtactcacaccaggctcaggtgtggttcgacctcatgagagagttcaggtgg
aaccacattatcctgattgtcagcgatgaccacgagggccgagccgcccagaagaagctg
gagacactgcttgaagagcgcgagacaaagactaaaaacaggaactatgaaaacctcgac
caacagaactttgacttcaggagaacacccaaggcagagaaagttctgctgttcaaccag
gacaccaacctgacagctctgctgctggaagccagagaccttgaggccagagttattatc
ctctcagcaagcgaggacgaggctgcagccgtctataaggcagcccggcagctcaacatg
accggctctggttacgtgtggctggtcggggagagggagatgaacggcaaggctctgaat
gaagctccagacggcctgctgggcctccaactgatcaacggtaagaacgagtcagctcac
attgcggacgccgtcgccgtggttgctcagtctctgcaggaattgtttgagaaagagaac
atcacagagcccccgcgaggatgcgtaggaaacactaatatctggaggaccggcccgctc
ttcaaaagagtgctgatgtcatcaaagtaccctgatgggttgacgggccgaatcgagttc
aatgacgacggagatcggcgcttcgctacctacagcatccttaattatcagcagaaaccc
ggccgtgttgtccaggttggaatcttcaacggaactcaggttgtgatgaatcctcagagg
aagatcatctggcctggaggagagacagagaaaccagtgggataccagatgtcaaccaag
ctgaagatcgtgaccatccaccaggagccgtttgtttatgtgaagccaacaaagagcgac
ggaacgtgcaaagaagaatacactgtaaatggagtcctgataaagaaagtgatctgtact
ggacccaacgggaccataccaggtcaacccatcgtccctcagtgctgctatggcttctgc
attgacctgctcatcaagctggctatgagcatgaacttcacctatgaggtgcacctggtg
gctgatgggaagttcggcacgcaagagcgggtaaacaacagcaacaagaaagagtggaac
gggatgatgggggagctgctgggggggctagccgacatgatcgtggcccccctcaccatc
aacaacgagcgcgctcaatacattgagttctccaagcccttcaaataccaggggctcacc
atcctcgtcaagaaggaaatccctcgcagcactctggactcgttcatgcagcctttccag
agcacactgtggcttttagtcggtctgtcggtccatgtggtggcagtgatgctttaccta
ctagaccggttcagcccgtttggaaggttcaaagtgaacagcgaagaagaagaagaagac
gccctcaccttgtcctccgccatgtggttctcttggggagttttgctgaactctgggatc
ggagaaggagctcccaggagcttctcagctaggatcctggggatggtgtgggcaggtttt
gccatgatcatcgtagcatcgtacactgccaatctggcagccttcctggtgctggaccgg
cctgaggagcgcatcactggcatcaatgaccccaggctgcgtaacccatcagataagttc
atctacgccacagtgaagcagagctcggtggatatttacttcagacggcaggtggaactg
agcaccatgtaccggcacatggagaaacacaactatgagagcgccgctgaggccatccag
gctgtccgagacaacaagcttcacgccttcatctgggacagtgctgtgttggagtttgag
gcttcacagaagtgcgatctggtaacaacgggagagcttttcttccgctcaggcttcggg
attggaatgaggaaagacagcccgtggaaacagaacgtttctctggccattctcagctca
catgagaacggcttcatggaggatcttgacaagacttgggtgcgataccaggagtgcgac
tccaggagtaatgctcctgcgactctcaccttcgagaacatggcaggtgtgttcatgctg
gtcgccggcggcatcgtggcggggatcttcctcattttcatcgagatcgcttacaaacgt
cacaaagacgctcgcaggaaacagatgcagctggccttcgctgccgtgaacgtgtggagg
aagaacctgcaggataggaaaagtggtagagcagagcccgagcccaaaacctcttttagg
tccatcacttcgacctccgacctcaaacgccgtatggcccccggggacgccacgccgtac
ccgactgacatcaccggccagctcaacctatcagacccgtccgtcagcaccgtggtctaa
DBGET
integrated database retrieval system
