Oryzias melastigma (Indian medaka): 112149490
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Entry
112149490 CDS
T07439
Symbol
ppp2r1bb
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03015
mRNA surveillance pathway
oml04110
Cell cycle
oml04114
Oocyte meiosis
oml04261
Adrenergic signaling in cardiomyocytes
oml04350
TGF-beta signaling pathway
oml04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112149490 (ppp2r1bb)
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
112149490 (ppp2r1bb)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
112149490 (ppp2r1bb)
04114 Oocyte meiosis
112149490 (ppp2r1bb)
09144 Cellular community - eukaryotes
04530 Tight junction
112149490 (ppp2r1bb)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
112149490 (ppp2r1bb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oml01009
]
112149490 (ppp2r1bb)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oml03019
]
112149490 (ppp2r1bb)
03036 Chromosome and associated proteins [BR:
oml03036
]
112149490 (ppp2r1bb)
Protein phosphatases and associated proteins [BR:
oml01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
112149490 (ppp2r1bb)
Messenger RNA biogenesis [BR:
oml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
112149490 (ppp2r1bb)
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
112149490 (ppp2r1bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
Vac14_Fab1_bd
HEAT_EZ
PDS5
Htt_N-HEAT_1
Cnd1
Adaptin_N
SCD
CLASP_N
M11L
Motif
Other DBs
NCBI-GeneID:
112149490
NCBI-ProteinID:
XP_024132981
Ensembl:
ENSOMEG00000014950
LinkDB
All DBs
Position
LG13:16693603..16707680
Genome browser
AA seq
589 aa
AA seq
DB search
MAGADGDDSLYPIAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRTELLPFLTDTIY
DEDEVLLALAEQLGNFTMLVGGPEYVHCLLPPLESLATVEETVVRDKAVESLRKISQEHS
PVDLEVHFEPLVKRLASGDWFTSRTSACGLFSVCYPRVSSTVKAEIRQHFRTLCSDDTPM
VRRAAASKLGEFAKVLEPEYVKSDIISLFTALASDEQDSVRLLAVEACVSIATLLPQEDL
ETLVMPTLRQAAEDKSWRVRYMVADKFSELQKAVGSEITKNDLVPAFQNLLKDCEAEVRA
AAANKVKEFCENLPEDNREQIIMTHILPCVKELVSDTNQHVKSALASVIMGLSTILGKDN
TIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVR
LAIIEYMPLLAGQLGVEFFDEKLNTLCMAWLIDHVYAIREAATCNLMKLVEKFGAEWAQN
TIVPKVLGMANDPNYLHRMTTLFCINALSEACGQEITTKQMLPVVLKMSNDQVANVRFNV
AKSLQKIGPVLDSNALQTEVKPVLEKLATDSDMDVKYFAQEAISVLALA
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggctggagctgatggagacgattctctctaccctattgctgttctcatcgacgaattg
agaaatgaggacgtccagctgcgtctcaacagcatcaagaagctgtccactattgcacta
gctctcggtgtggagaggactcgcacagagctccttcctttcctcacagacactatctat
gatgaagatgaagtgcttttggcattggctgagcagcttggcaatttcactatgctggtg
gggggaccagagtatgttcactgcctcttgcctcctctggagagtcttgcaacagtggaa
gaaacggttgtcagagacaaagctgtggaatccctgcgaaagatctctcaggagcactct
ccagttgacctggaggtccactttgagcctttggtgaagcggctggccagtggtgactgg
ttcacctctcgcacttcagcttgtggcctcttcagcgtgtgttatccccgggtatccagc
accgtcaaggctgaaattcgtcagcattttcgcaccttgtgttcagatgacaccccaatg
gtgcgtcgagctgctgcatctaagttgggggagtttgccaaagtcctggagcctgaatat
gtaaaaagtgacatcatttccctcttcactgctttggcttccgatgagcaggactctgtg
cggttgctcgcagtggaggcttgtgtaagcattgctactctgctgccacaagaggacttg
gagacattggtgatgccaacccttcgccaggctgcagaagacaagtcttggagagttcgc
tacatggtggctgacaagttctcagagctccagaaagcagttgggtctgaaatcaccaaa
aacgacctggtccctgccttccagaatcttcttaaagactgtgaagctgaggtccgtgct
gctgcggccaacaaagtcaaagaattctgcgagaacctcccagaggacaaccgtgagcaa
atcatcatgactcacattctgccctgtgtcaaggaacttgtctcagacaccaaccagcat
gtgaagtccgctctggcctcggtcataatgggcctttccaccatactgggcaaggacaac
acaattgagcacttgctgcctctcttcctggctcagcttaaagatgagtgccctgaggtg
cgtctgaatatcatctccaatctggactgtgtgaatgaggtgatcggcatacggcagctg
tcacagtcactgctgcccgccattgtggagttggctgaggatgccaagtggcgggttcgt
ctcgccatcatagagtacatgcccttgttggcggggcaactgggggtggagttctttgat
gaaaagctcaacacactctgcatggcctggctaattgatcatgtgtatgccatccgtgag
gcggccacttgtaacctcatgaagcttgtggagaagtttggggcagagtgggctcagaac
accattgtgcccaaagttcttggaatggccaacgaccccaattacctccacaggatgacc
actctgttctgcatcaatgctttgtcagaagcatgtggtcaggagatcaccacgaagcag
atgctgcccgtggtcctgaagatgtccaacgaccaggtggctaacgtccgcttcaatgtg
gccaagtccctgcagaagattggcccggtcctcgacagcaatgctctgcaaacagaagtg
aagccggtgctggagaagctggccactgactctgacatggatgtcaagtattttgcccag
gaggctattagtgttctggccctcgcataa
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