Oryzias melastigma (Indian medaka): 112152193
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Entry
112152193 CDS
T07439
Symbol
polr3b
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC2
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03020
RNA polymerase
oml04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
112152193 (polr3b)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
112152193 (polr3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oml03021
]
112152193 (polr3b)
Enzymes [BR:
oml01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
112152193 (polr3b)
Transcription machinery [BR:
oml03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
112152193 (polr3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
112152193
NCBI-ProteinID:
XP_024137370
LinkDB
All DBs
Position
LG6:23097786..23126505
Genome browser
AA seq
1132 aa
AA seq
DB search
MEVLGEDFGDLTPQELAAPVNTVADKWKLLPAFLKVKGLVKQHIDSFNYFINVEIKKIMK
ANEKITSDADPMWYLKYLNIYVGMPDVEESFNVTRPVSPHECRLRDMTYSAPITVDIEYT
RGSQRIIRNALPIGRMPIMLRSSNCVLTGKTPMEFSKLNECPLDPGGYFIVKGQEKVILI
QEQLSKNRIIVDQDRKGTVGASVTSSTHEKKSRTNIIVKQGRFYLRHNTLSEDAPIAIIF
KGMGVESDQEIVQMIGTEEHVMANFAPSLEECQKAQIFTQTQALRFLGNKVRRQRMWGGP
KKTKMEEARELLASLILTHVPVKEFNFRAKCIYLAVMVRRVILAQGDNKVDDRDYYGNKR
LELAGQLLSLLFEDLFKKFNSELKKIADQIIPKQRAAQFDVVKHMRQDQITNGMVNAIST
GNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCP
SDTPEGEACGLVKNLALMTHITTDMEDGPIIKLALNLGVEDVNLLCGEELSYPSVFLVFL
NGNILGVIRNHHKLVTTFRLMRRAGFINEFVSISTNLTDRCVYISSDGGRLCRPYIIVKK
GQPMVKSKHIEDLSQGYRNFEDFLHEGLVEYLDVNEENDCQIALYEHMINKDTTHLEIEP
FTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIGYNQRNRIDTLMYLLTYPQRPMVK
TKTIELIDFEKLPAGQNATVAVMSYSGYDIEDALVLNKASLDRGFGRCLVYKNTKCTLRR
YTNQTFDKVMGPMLDAVTRKPLWRHNILDADGICCPGERVENKQILVNKSMPTVTQTPLE
GSAHPGQPQYKDVPISYKGSTDSYIEKVMISSNAEDAFLIKILLRQTRRPEIGDKFSSRH
GQKGVCGLIVPQEDMPFCDSGVCPDIIMNPHGYPSRMTVGKLIELLAGKAGVLDGRFHYG
TAFGGSKVKDVCEDLIRYGYNYQGKDYVTSGITGEPLEAYIYFGPVYYQKLKHMVLDKMH
ARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISSDAFEVDVCG
QCGLLGYSGWCHYCKSSCHVSSLKIPYACKLLFQELQSMNIIPRLKLSRYNE
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcctcggtgaagactttggagacttgactcctcaggagttggcggctcctgtc
aacaccgtggctgataaatggaagctgttaccagcctttttgaaggtgaaaggtttggtg
aagcagcacattgactccttcaactatttcatcaatgtggagataaagaagatcatgaaa
gcgaatgaaaaaatcaccagtgatgctgatcccatgtggtacctgaaatatctcaatatt
tatgtcggcatgcctgatgtggaagaaagcttcaacgttactagacctgtttctcctcat
gagtgtcgcctcagagacatgacctactccgcaccgatcacagtggacatagagtacact
cgtggcagccagaggatcatccgaaacgctcttcctattggacggatgccgatcatgctg
cgaagctccaactgtgttctcacagggaagacgcccatggagttttccaaactaaacgaa
tgccctctggatccaggaggttacttcatcgttaaaggtcaggagaaagtcatcctgatc
caggagcagctgtctaagaaccggatcatcgtggaccaagacaggaaggggacagttgga
gcttcagttactagctctactcatgaaaagaaaagtagaactaatattattgtgaagcaa
ggacgcttctacctgagacataacacgctgtcggaggacgcgcccatcgctatcatcttt
aagggtatgggtgtggagagcgaccaggagatcgtgcagatgattggcacagaggagcat
gtcatggccaacttcgccccgagcctggaggagtgtcagaaagcccagatcttcacgcag
actcaggctctgaggtttcttgggaataaagtgcgcaggcagcggatgtggggagggccc
aagaagaccaagatggaggaggccagggagctgctggcctcactcatcctcactcacgta
cctgttaaagagtttaactttcgagcaaagtgtatttatctggctgtgatggttcggaga
gtgatcctggctcaaggtgataacaaggtggatgacagagattactatggaaacaagcgt
ctggagctggctggacagctcttgtctttgctgtttgaggatttgttcaagaagtttaac
tctgaactgaagaagattgctgaccagatcatccccaagcagagagcggctcagtttgat
gtggtcaaacacatgcggcaggatcagatcaccaacggcatggtcaacgccatatccacc
ggaaactggtctctgaagaggttcaagatggaccgtcagggcgtcacccaggttctgtct
cggctttcttacatttctgctctgggtatgatgaccaggatctcctctcagtttgagaag
accaggaaggtgagcgggccgcgctctctgcagccgtcgcagtggggcatgctgtgtccg
tccgacacgcctgaaggagaggcttgcggtttggtgaagaacttggctctgatgactcac
atcaccaccgacatggaggacggacccatcatcaagctggccttgaacctcggggtggaa
gacgtcaacctgctgtgtggggaggagctgtcctaccccagcgtcttcctcgtcttcctc
aacggaaacatcctcggcgtgataagaaatcaccacaaactcgtcaccactttcagactc
atgcgcagggccggtttcatcaacgagtttgtgtccatctccacaaacctgaccgatcgc
tgcgtgtacatctcctcagatggaggacgactctgcaggccgtacatcatagtgaagaag
ggacagcccatggtgaaaagcaaacacattgaagatctttctcagggttacagaaatttt
gaggactttctgcatgaaggtctggtagagtatctagacgtcaacgaggagaacgactgt
cagattgctctctatgaacacatgatcaacaaagacacgactcacttggagatcgagccg
ttcacgctgctcggagtgtgtgcaggcctcattccctacccccaccacaaccagtcgccc
aggaacacgtaccagtgtgctatgggcaagcaggccatgggaactattggctacaaccag
aggaaccgtattgacaccctgatgtacctgttgacgtaccctcagaggcccatggtcaaa
accaaaaccatcgagctgattgactttgaaaagctccctgcgggtcagaacgccacagtg
gcagtgatgagctacagcggctacgacattgaagacgctctagttctcaacaaagcctca
cttgacagaggatttggtcgatgccttgtttacaaaaatacaaagtgcacactgaggcgg
tacactaaccagacttttgacaaagtcatggggcccatgctggatgctgtcacacgcaaa
cctctttggagacacaacatcctggatgctgatggcatttgctgtcctggtgaaagagtg
gaaaacaagcaaattttggtgaacaagtcgatgccaactgtcactcagacaccactggag
ggcagtgcccatccaggccagccccagtacaaagacgtgcccatcagctataaaggctcc
acggactcgtacatcgagaaggtcatgatctcctccaacgctgaagatgccttcctcatc
aagatcctgctgaggcagaccaggaggccggagataggagacaagttcagcagtcgacac
gggcagaaaggtgtttgtgggctcatcgtgccgcaggaggacatgccgttctgtgactcc
ggcgtctgtccagatatcatcatgaaccctcacgggtatccctccagaatgacggtgggg
aagctgattgaactgctggccgggaaagccggagttctggacggacgcttccactatggt
acggcttttggaggcagtaaagtgaaggatgtgtgcgaggatcttatccgttatgggtac
aactaccagggcaaggactatgtgacctcaggaatcacaggggaacccctggaggcttac
atctactttgggccggtctattaccagaagctgaagcacatggttctggataagatgcac
gccagagctcggggtcccagagcggttctcaccaggcagcccacagagggacgctccaga
gacggcggtctgcgtctgggggagatggagcgcgactgtttgatcggctacggggcgagc
atgctactgctggagcgcctcatgatctccagtgacgccttcgaggtggatgtttgtgga
cagtgtggcctgcttggatactccgggtggtgtcattactgtaagtcgtcttgtcacgtc
tcctccctgaaaatcccgtacgcctgcaagcttctcttccaggagctgcagtccatgaac
atcatccctcgactcaaactgtcgcgttacaacgagtga
DBGET
integrated database retrieval system
